Skip to content

Commit 24198ff

Browse files
MechCoderMechCoder
committed
Merge pull request scikit-learn#6419 from nelson-liu/fix_linkcheck
[MRG+1] DOC: Fix broken links
2 parents 3183895 + 9b7176d commit 24198ff

File tree

77 files changed

+253
-262
lines changed

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

77 files changed

+253
-262
lines changed

‎CONTRIBUTING.md

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -12,10 +12,10 @@ How to contribute
1212
-----------------
1313

1414
The preferred way to contribute to scikit-learn is to fork the
15-
[main repository](http://github.com/scikit-learn/scikit-learn/) on
15+
[main repository](https://github.com/scikit-learn/scikit-learn) on
1616
GitHub:
1717

18-
1. Fork the [project repository](http://github.com/scikit-learn/scikit-learn):
18+
1. Fork the [project repository](https://github.com/scikit-learn/scikit-learn):
1919
click on the 'Fork' button near the top of the page. This creates
2020
a copy of the code under your account on the GitHub server.
2121

‎doc/README

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -35,5 +35,5 @@ to update the http://scikit-learn.org/dev tree of the website.
3535

3636
The configuration of this server is managed at:
3737

38-
http://github.com/scikit-learn/sklearn-docbuilder
38+
https://github.com/scikit-learn/sklearn-docbuilder
3939

‎doc/about.rst

Lines changed: 9 additions & 9 deletions
Original file line numberDiff line numberDiff line change
@@ -63,7 +63,7 @@ High quality PNG and SVG logos are available in the `doc/logos/ <https://github.
6363
Funding
6464
-------
6565

66-
`INRIA <http://www.inria.fr>`_ actively supports this project. It has
66+
`INRIA <https://www.inria.fr>`_ actively supports this project. It has
6767
provided funding for Fabian Pedregosa (2010-2012), Jaques Grobler
6868
(2012-2013) and Olivier Grisel (2013-2015) to work on this project
6969
full-time. It also hosts coding sprints and other events.
@@ -88,9 +88,9 @@ Environment also funds several students to work on the project part-time.
8888
:width: 200pt
8989
:align: center
9090

91-
The following students were sponsored by `Google <http://code.google.com/opensource/>`_
91+
The following students were sponsored by `Google <https://developers.google.com/open-source/>`_
9292
to work on scikit-learn through the
93-
`Google Summer of Code <http://en.wikipedia.org/wiki/Google_Summer_of_Code>`_
93+
`Google Summer of Code <https://en.wikipedia.org/wiki/Google_Summer_of_Code>`_
9494
program.
9595

9696
- 2007 - David Cournapeau
@@ -102,14 +102,14 @@ program.
102102
It also provided funding for sprints and events around scikit-learn. If
103103
you would like to participate in the next Google Summer of code
104104
program, please see `this page
105-
<http://github.com/scikit-learn/scikit-learn/wiki/SummerOfCode>`_
105+
<https://github.com/scikit-learn/scikit-learn/wiki/SummerOfCode>`_
106106

107107
The `NeuroDebian <http://neuro.debian.net>`_ project providing `Debian
108108
<http://www.debian.org>`_ packaging and contributions is supported by
109109
`Dr. James V. Haxby <http://haxbylab.dartmouth.edu/>`_ (`Dartmouth
110-
College <http://www.dartmouth.edu/~psych/>`_).
110+
College <http://pbs.dartmouth.edu>`_).
111111

112-
The `PSF <http://www.python.org/psf/>`_ helped find and manage funding for our
112+
The `PSF <https://www.python.org/psf/>`_ helped find and manage funding for our
113113
2011 Granada sprint. More information can be found `here
114114
<https://github.com/scikit-learn/scikit-learn/wiki/Past-sprints#granada-19th-21th-dec-2011>`__
115115

@@ -121,12 +121,12 @@ Donating to the project
121121
~~~~~~~~~~~~~~~~~~~~~~~
122122

123123
If you are interested in donating to the project or to one of our code-sprints, you can use
124-
the *Paypal* button below or the `NumFOCUS Donations Page <http://numfocus.org/donatejoin/>`_ (if you use the latter, please indicate that you are donating for the scikit-learn project).
124+
the *Paypal* button below or the `NumFOCUS Donations Page <http://www.numfocus.org/support-numfocus.html>`_ (if you use the latter, please indicate that you are donating for the scikit-learn project).
125125

126126
All donations will be handled by `NumFOCUS
127-
<http://numfocus.org/donations>`_, a non-profit-organization which is
127+
<http://www.numfocus.org>`_, a non-profit-organization which is
128128
managed by a board of `Scipy community members
129-
<http://numfocus.org/board>`_. NumFOCUS's mission is to foster
129+
<http://www.numfocus.org/board>`_. NumFOCUS's mission is to foster
130130
scientific computing software, in particular in Python. As a fiscal home
131131
of scikit-learn, it ensures that money is available when needed to keep
132132
the project funded and available while in compliance with tax regulations.

‎doc/datasets/twenty_newsgroups.rst

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -111,7 +111,7 @@ components by sample in a more than 30000-dimensional space
111111
ready-to-use tfidf features instead of file names.
112112

113113
.. _`20 newsgroups website`: http://people.csail.mit.edu/jrennie/20Newsgroups/
114-
.. _`TF-IDF`: http://en.wikipedia.org/wiki/Tf-idf
114+
.. _`TF-IDF`: https://en.wikipedia.org/wiki/Tf-idf
115115

116116

117117
Filtering text for more realistic training

‎doc/developers/advanced_installation.rst

Lines changed: 4 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -140,7 +140,7 @@ from source package
140140
~~~~~~~~~~~~~~~~~~~
141141

142142
download the source package from
143-
`pypi <http://pypi.python.org/pypi/scikit-learn/>`_,
143+
`pypi <https://pypi.python.org/pypi/scikit-learn>`_,
144144
, unpack the sources and cd into the source directory.
145145

146146
this packages uses distutils, which is the default way of installing
@@ -163,12 +163,12 @@ or alternatively (also from within the scikit-learn source folder)::
163163
windows
164164
-------
165165

166-
first, you need to install `numpy <http://numpy.scipy.org/>`_ and `scipy
166+
first, you need to install `numpy <http://www.numpy.org/>`_ and `scipy
167167
<http://www.scipy.org/>`_ from their own official installers.
168168

169169
wheel packages (.whl files) for scikit-learn from `pypi
170170
<https://pypi.python.org/pypi/scikit-learn/>`_ can be installed with the `pip
171-
<http://pip.readthedocs.org/en/latest/installing.html>`_ utility.
171+
<https://pip.readthedocs.org/en/stable/installing/>`_ utility.
172172
open a console and type the following to install or upgrade scikit-learn to the
173173
latest stable release::
174174

@@ -280,9 +280,7 @@ path environment variable.
280280

281281
for 32-bit python it is possible use the standalone installers for
282282
`microsoft visual c++ express 2008 <http://go.microsoft.com/?linkid=7729279>`_
283-
for python 2 or
284-
`microsoft visual c++ express 2010 <http://go.microsoft.com/?linkid=9709949>`_
285-
or python 3.
283+
for python 2 or microsoft visual c++ express 2010 for python 3.
286284

287285
once installed you should be able to build scikit-learn without any
288286
particular configuration by running the following command in the scikit-learn

‎doc/developers/contributing.rst

Lines changed: 12 additions & 12 deletions
Original file line numberDiff line numberDiff line change
@@ -7,7 +7,7 @@ Contributing
77
This project is a community effort, and everyone is welcome to
88
contribute.
99

10-
The project is hosted on http://github.com/scikit-learn/scikit-learn
10+
The project is hosted on https://github.com/scikit-learn/scikit-learn
1111

1212
Scikit-learn is somewhat :ref:`selective <selectiveness>` when it comes to
1313
adding new algorithms, and the best way to contribute and to help the project
@@ -19,7 +19,7 @@ Submitting a bug report
1919

2020
In case you experience issues using this package, do not hesitate to submit a
2121
ticket to the
22-
`Bug Tracker <http://github.com/scikit-learn/scikit-learn/issues>`_. You are
22+
`Bug Tracker <https://github.com/scikit-learn/scikit-learn/issues>`_. You are
2323
also welcome to post feature requests or pull requests.
2424

2525

@@ -29,7 +29,7 @@ Retrieving the latest code
2929
==========================
3030

3131
We use `Git <http://git-scm.com/>`_ for version control and
32-
`GitHub <http://github.com/>`_ for hosting our main repository.
32+
`GitHub <https://github.com/>`_ for hosting our main repository.
3333

3434
You can check out the latest sources with the command::
3535

@@ -82,14 +82,14 @@ How to contribute
8282
-----------------
8383

8484
The preferred way to contribute to scikit-learn is to fork the `main
85-
repository <http://github.com/scikit-learn/scikit-learn/>`__ on GitHub,
85+
repository <https://github.com/scikit-learn/scikit-learn/>`__ on GitHub,
8686
then submit a "pull request" (PR):
8787

88-
1. `Create an account <https://github.com/signup/free>`_ on
88+
1. `Create an account <https://github.com/join>`_ on
8989
GitHub if you do not already have one.
9090

9191
2. Fork the `project repository
92-
<http://github.com/scikit-learn/scikit-learn>`__: click on the 'Fork'
92+
<https://github.com/scikit-learn/scikit-learn>`__: click on the 'Fork'
9393
button near the top of the page. This creates a copy of the code under your
9494
account on the GitHub server.
9595

@@ -237,8 +237,8 @@ and are viewable in a web browser. See the README file in the doc/ directory
237237
for more information.
238238

239239
For building the documentation, you will need `sphinx
240-
<http://sphinx.pocoo.org/>`_,
241-
`matplotlib <http://matplotlib.sourceforge.net/>`_ and
240+
<http://sphinx-doc.org/>`_,
241+
`matplotlib <http://matplotlib.org>`_ and
242242
`pillow <http://pillow.readthedocs.org/en/latest/>`_.
243243

244244
**When you are writing documentation**, it is important to keep a good
@@ -297,7 +297,7 @@ Finally, follow the formatting rules below to make it consistently good:
297297
Testing and improving test coverage
298298
------------------------------------
299299

300-
High-quality `unit testing <http://en.wikipedia.org/wiki/Unit_testing>`_
300+
High-quality `unit testing <https://en.wikipedia.org/wiki/Unit_testing>`_
301301
is a corner-stone of the scikit-learn development process. For this
302302
purpose, we use the `nose <http://nose.readthedocs.org/en/latest/>`_
303303
package. The tests are functions appropriately named, located in `tests`
@@ -313,7 +313,7 @@ We expect code coverage of new features to be at least around 90%.
313313
.. note:: **Workflow to improve test coverage**
314314

315315
To test code coverage, you need to install the `coverage
316-
<http://pypi.python.org/pypi/coverage>`_ package in addition to nose.
316+
<https://pypi.python.org/pypi/coverage>`_ package in addition to nose.
317317

318318
1. Run 'make test-coverage'. The output lists for each file the line
319319
numbers that are not tested.
@@ -392,7 +392,7 @@ the review easier so new code can be integrated in less time.
392392

393393
Uniformly formatted code makes it easier to share code ownership. The
394394
scikit-learn project tries to closely follow the official Python guidelines
395-
detailed in `PEP8 <http://www.python.org/dev/peps/pep-0008/>`_ that
395+
detailed in `PEP8 <https://www.python.org/dev/peps/pep-0008>`_ that
396396
detail how code should be formatted and indented. Please read it and
397397
follow it.
398398

@@ -414,7 +414,7 @@ In addition, we add the following guidelines:
414414

415415
* **Please don't use** ``import *`` **in any case**. It is considered harmful
416416
by the `official Python recommendations
417-
<http://docs.python.org/howto/doanddont.html#from-module-import>`_.
417+
<https://docs.python.org/2/howto/doanddont.html#from-module-import>`_.
418418
It makes the code harder to read as the origin of symbols is no
419419
longer explicitly referenced, but most important, it prevents
420420
using a static analysis tool like `pyflakes

‎doc/developers/performance.rst

Lines changed: 7 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -40,7 +40,7 @@ this means trying to **replace any nested for loops by calls to equivalent
4040
Numpy array methods**. The goal is to avoid the CPU wasting time in the
4141
Python interpreter rather than crunching numbers to fit your statistical
4242
model. It's generally a good idea to consider NumPy and SciPy performance tips:
43-
http://wiki.scipy.org/PerformanceTips
43+
http://scipy.github.io/old-wiki/pages/PerformanceTips
4444

4545
Sometimes however an algorithm cannot be expressed efficiently in simple
4646
vectorized Numpy code. In this case, the recommended strategy is the
@@ -304,7 +304,7 @@ Memory usage profiling
304304
======================
305305

306306
You can analyze in detail the memory usage of any Python code with the help of
307-
`memory_profiler <http://pypi.python.org/pypi/memory_profiler>`_. First,
307+
`memory_profiler <https://pypi.python.org/pypi/memory_profiler>`_. First,
308308
install the latest version::
309309

310310
$ pip install -U memory_profiler
@@ -401,7 +401,7 @@ project.
401401
TODO: html report, type declarations, bound checks, division by zero checks,
402402
memory alignment, direct blas calls...
403403

404-
- http://www.euroscipy.org/file/3696?vid=download
404+
- https://www.youtube.com/watch?v=gMvkiQ-gOW8
405405
- http://conference.scipy.org/proceedings/SciPy2009/paper_1/
406406
- http://conference.scipy.org/proceedings/SciPy2009/paper_2/
407407

@@ -421,16 +421,16 @@ Using yep and google-perftools
421421

422422
Easy profiling without special compilation options use yep:
423423

424-
- http://pypi.python.org/pypi/yep
425-
- http://fseoane.net/blog/2011/a-profiler-for-python-extensions/
424+
- https://pypi.python.org/pypi/yep
425+
- http://fa.bianp.net/blog/2011/a-profiler-for-python-extensions
426426

427427
.. note::
428428

429429
google-perftools provides a nice 'line by line' report mode that
430430
can be triggered with the ``--lines`` option. However this
431431
does not seem to work correctly at the time of writing. This
432432
issue can be tracked on the `project issue tracker
433-
<https://code.google.com/p/google-perftools/issues/detail?id=326>`_.
433+
<https://github.com/gperftools/gperftools>`_.
434434

435435

436436

@@ -460,7 +460,7 @@ TODO: give a simple teaser example here.
460460

461461
Checkout the official joblib documentation:
462462

463-
- http://packages.python.org/joblib/
463+
- https://pythonhosted.org/joblib
464464

465465

466466
.. _warm-restarts:

‎doc/developers/utilities.rst

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -93,7 +93,7 @@ Efficient Linear Algebra & Array Operations
9393
by directly calling the BLAS
9494
``nrm2`` function. This is more stable than ``scipy.linalg.norm``. See
9595
`Fabian's blog post
96-
<http://fseoane.net/blog/2011/computing-the-vector-norm/>`_ for a discussion.
96+
<http://fa.bianp.net/blog/2011/computing-the-vector-norm>`_ for a discussion.
9797

9898
- :func:`extmath.fast_logdet`: efficiently compute the log of the determinant
9999
of a matrix.

‎doc/install.rst

Lines changed: 4 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -51,8 +51,8 @@ Canopy and Anaconda for all supported platforms
5151
-----------------------------------------------
5252

5353
`Canopy
54-
<http://www.enthought.com/products/canopy>`_ and `Anaconda
55-
<https://store.continuum.io/cshop/anaconda/>`_ both ship a recent
54+
<https://www.enthought.com/products/canopy>`_ and `Anaconda
55+
<https://www.continuum.io/downloads>`_ both ship a recent
5656
version of scikit-learn, in addition to a large set of scientific python
5757
library for Windows, Mac OSX and Linux.
5858

@@ -83,9 +83,8 @@ Anaconda offers scikit-learn as part of its free distribution.
8383
Python(x,y) for Windows
8484
-----------------------
8585

86-
The `Python(x,y) <https://code.google.com/p/pythonxy/>`_ project distributes
87-
scikit-learn as an additional plugin, which can be found in the `Additional
88-
plugins <http://code.google.com/p/pythonxy/wiki/AdditionalPlugins>`_ page.
86+
The `Python(x,y) <https://python-xy.github.io>`_ project distributes
87+
scikit-learn as an additional plugin.
8988

9089

9190
For installation instructions for particular operating systems or for compiling

‎doc/modules/clustering.rst

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1010,7 +1010,7 @@ random labelings by defining the adjusted Rand index as follows:
10101010
.. topic:: References
10111011

10121012
* `Comparing Partitions
1013-
<http://www.springerlink.com/content/x64124718341j1j0/>`_
1013+
<http://link.springer.com/article/10.1007%2FBF01908075>`_
10141014
L. Hubert and P. Arabie, Journal of Classification 1985
10151015

10161016
* `Wikipedia entry for the adjusted Rand index
@@ -1170,7 +1170,7 @@ calculated using a similar form to that of the adjusted Rand index:
11701170
* Vinh, Epps, and Bailey, (2009). "Information theoretic measures
11711171
for clusterings comparison". Proceedings of the 26th Annual International
11721172
Conference on Machine Learning - ICML '09.
1173-
`doi:10.1145/1553374.1553511 <http://dx.doi.org/10.1145/1553374.1553511>`_.
1173+
`doi:10.1145/1553374.1553511 <https://dl.acm.org/citation.cfm?doid=1553374.1553511>`_.
11741174
ISBN 9781605585161.
11751175

11761176
* Vinh, Epps, and Bailey, (2010). Information Theoretic Measures for

0 commit comments

Comments
 (0)