Abstract
Mechanisms that underlie the patterning of cytokine expression in T helper (TH) cell subsets remain incompletely defined. An evolutionarily conserved ∼400-bp noncoding sequence in the intergenic region between the genes Il4 and Il13, designated conserved noncoding sequence 1 (CNS-1), was deleted in mice. The capacity to develop TH2 cells was compromised in vitro and in vivo in the absence of CNS-1. Despite the profound effect in T cells, mast cells from CNS-1−/− mice maintained their capacity to produce interleukin 4. A T cell–specific element critical for the optimal expression of type 2 cytokines may represent the evolution of a regulatory sequence exploited by adaptive immunity.
This is a preview of subscription content, access via your institution
Access options
Subscribe to this journal
Receive 12 print issues and online access
206,07 € per year
only 17,17 € per issue
Buy this article
- Purchase on SpringerLink
- Instant access to full article PDF
Prices may be subject to local taxes which are calculated during checkout








Similar content being viewed by others
References
Glimcher, L. H. & Murphy, K. M. Lineage commitment in the immune system: the T helper lymphocyte grows up. Genes Dev. 14, 1693–1711 (2000).
Grogan, J. L. et al. Early transcription and silencing of cytokine genes underlie polarization of T helper subsets. Immunity 14, 205–215 (2001).
Takemoto, N. et al. TH2-specific DNase I-hypersensitive sites in the murine IL-13 and IL-4 intergenic region. Int. Immunol. 10, 1981–1985 (1998).
Bird, J. J. et al. Helper T cell differentiation is controlled by the cell cycle. Immunity 9, 229–237 (1998).
Agarwal, S. & Rao, A. Modulation of chromatin structure regulates cytokine gene expression during T cell differentiation. Immunity 9, 765–775 (1998).
Fitzpatrick, D. R., Shirley, K. M. & Kelso, A. Cutting edge: stable epigenetic inheritance of regional IFN-γ promoter demethylation in CD44hiCD8+ T lymphocytes. J. Immunol. 162, 5053–5057 (1999).
Zheng, W.-P. & Flavell, R. A. The transcription factor GATA-3 is necessary and sufficient for TH2 cytokine gene expression in CD4 T cells. Cell 89, 587–596 (1997).
Szabo, S. J. et al. A novel transcription factor, T-bet, directs TH1 lineage commitment. Cell 100, 655–669 (2000).
Agarwal, S., Avni, O. & Rao, A. Cell-type-restricted binding of the transcription factor NFAT to a distal IL-4 enhancer in vivo. Immunity 12, 643–652 (2000).
Li, Q., Harju, S. & Peterson, K. R. Locus control regions: coming of age at a decade plus. Trends Genet. 15, 403–408 (1999).
Loots, G. G. et al. Identification of a coordinate regulator of interleukins 4, 13 and 5 by cross-species sequence comparisons. Science 288, 136–140 (2000).
Kelly, B. L. & Locksley, R. M. Coordinate regulation of the IL-4, IL-13 and IL-5 cytokine cluster in TH2 clones revealed by allelic expression patterns. J. Immunol. 165, 2982–2986 (2000).
Pennacchio, L. A. & Rubin, E. M. Genomic strategies to identify mammalian regulatory sequences. Nature Rev. Genet. 2, 100–109 (2001).
Sherman, M. A., Secor, V. H., Lee, S. K., Lopez, R. D. & Brown, M. A. Stat6-independent production of IL-4 by mast cells. Eur. J. Immunol. 29, 1235–1242 (1999).
Zon, L. I. et al. GATA-binding transcription factors in mast cells regulate the promoter of the mast cell carboxypeptidase A gene. J. Biol. Chem. 266, 22948–22953 (1991).
Sherman, M. A., Nachman, T. Y. & Brown, M. A. Cutting edge: IL-4 production by mast cells does not require c-maf. J. Immunol. 163, 1733–1736 (1999).
McKenzie, G. J., Fallon, P. G., Emson, C. L., Grencis, R. K. & McKenzie, A. N. J. Simultaneous disruption of interleukin (IL)-4 and IL-13 defines individual roles in T helper cell type 2-mediated responses. J. Exp. Med. 189, 1565–1572 (1999).
Urban, J. F. Jr et al. IL-13, IL-4Rα, and Stat6 are required for the expulsion of the gastrointestinal nematode parasite Nippostrongylus brasiliensis. Immunity 8, 255–264 (1998).
Grunig, G. et al. Interleukin 10 is a natural suppressor of cytokine production and inflammation in a murine model of allergic bronchopulmonary aspergillosis. J. Exp. Med. 185, 1089–1099 (1997).
Reiner, S. L. & Locksley, R. M. The regulation of immunity to Leishmania major. Annu. Rev. Immunol. 13, 151–177 (1995).
Bruhn, K. W., Nelms, K., Boulay, J.-L., Paul, W. E. & Lenardo, M. J. Molecular dissection of the mouse interleukin-4 promoter. Proc. Natl Acad. Sci. USA 90, 9707–9711 (1993).
Szabo, S. J., Gold, J. S., Murphy, T. L. & Murphy, K. M. Identification of cis-acting regulatory elements controlling interleukin-4 gene expression in T cells: roles for NF-Y and NF-ATc. Mol. Cell. Biol. 13, 4793–4805 (1993).
Lederer, J. A., Liou, J. S., Todd, M. D., Glimcher, L. H. & Lichtman, A. H. Regulation of cytokine gene expression in T helper cell subsets. J. Immunol. 152, 77–86 (1994).
Chuvilo, S. et al. Multiple closely-linked NFAT/octamer and HMG I(Y) binding sites are part of the interleukin-4 promoter. Nucleic Acids Res. 21, 5694–5704 (1993).
Todd, M. D. et al. Transcription of the interleukin 4 gene is regulated by multiple promoter elements. J. Exp. Med. 177, 1663–1674 (1993).
Rooney, J. W., Hoey, T. & Glimcher, L. H. Coordinate and cooperative roles for NF-AT and AP-1 in the regulation of the murine IL-4 gene. Immunity 2, 545–553 (1995).
Yoshida, H. et al. The transcription factor NF-ATc1 regulates lymphocyte proliferation and TH2 cytokine production. Immunity 8, 115–124 (1998).
Ranger, A. M. et al. Delayed lymphoid repopulation with defects in IL-4-driven responses produced by inactivation of NF-ATc. Immunity 8, 125–134 (1998).
Li, B., Tournier, C., Davis, R. J. & Flavell, R. A. Regulation of IL-4 expression by the transcription factor JunB during T helper cell differentiation. EMBO J. 18, 420–432 (1999).
Wenner, C. A., Szabo, S. J. & Murphy, K. M. Identification of IL-4 promoter elements conferring TH2-restricted expression during T helper cell subset development. J. Immunol. 158, 765–773 (1997).
Lee, G. R., Fields, P. E. & Flavell, R. A. Regulation of IL-4 gene expression by distal regulatory elements and GATA-3 at the chromatin level. Immunity 14, 447–459 (2001).
Ouyang, W. et al. Stat6-independent GATA-3 autoactivation directs IL-4-independent TH2 development and commitment. Immunity 12, 27–37 (2000).
Takemoto, N. et al. Cutting edge: chromatin remodeling at the IL-4/IL-13 intergenic regulatory region for TH2-specific cytokine gene cluster. J. Immunol. 165, 6687–6691 (2000).
Kurata, H., Lee, H. J., O'Garra, A. & Arai, N. Ectopic expression of activated Stat6 induces the expression of TH2-specific cytokines and transcription factors in developing TH1 cells. Immunity 11, 677–688 (1999).
Lee, H. J. et al. GATA-3 induces T helper type 2 (TH2) cytokine expression and chromatin remodeling in committed TH1 cells. J. Exp. Med. 192, 105–115 (2000).
Engel, J. D. & Tanimoto, K. Looping, linking, and chromatin activity: new insights into β-globin locus regulation. Cell 100, 499–502 (2000).
Grosschedl, R. & Marx, M. Stable propagation of the active transcriptional state of an immunoglobulin μ gene requires continuous enhancer function. Cell 55, 645–654 (1988).
Lichtenstein, M., Keini, G., Cedar, H. & Bergman, Y. B cell-specific demethylation: a novel role for the intronic kappa chain enhancer sequence. Cell 76, 913–923 (1994).
Kirillov, A. et al. A role of nuclear NF-κB in B-cell-specific demethylation of the Igκ locus. Nat. Genet. 13, 435–441 (1996).
Bories, J. C., Demengeot, J., Davidson, L. & Alt, F. Gene-targeted deletion and replacement mutations of the T cell receptor β-chain enhancer: the role of enhancer elements in controlling V(D)J recombination accessibility. Proc. Natl Acad. Sci. USA 93, 7871–7876 (1996).
Sleckman, B. P., Bardon, C. G., Ferrini, R., Davidson, L. & Alt, F. W. Function of the TCR α enhancer in α/β and γ/δT cells. Immunity 4, 505–515 (1997).
Hural, J. A., Kwan, M., Henkel, G., Hock, M. B. & Brown, M. A. An intron transcriptional enhancer element regulates IL-4 gene locus accessibility in mast cells. J. Immunol. 165, 3239–3249 (2000).
Paszty, C. et al. Lethal α-thalassaemia created by gene targeting in mice and its genetic rescue. Nat. Genet. 11, 33–39 (1995).
Nagy, A. et al. Dissecting the role of N-myc in development using a single targeting vector to generate a series of alleles. Curr. Biol. 8, 661–664 (1998).
Wagner, K.-U. et al. Cre-mediated gene deletion in the mammary gland. Nucleic Acids Res. 25, 4323–4330 (1997).
Fowell, D. J. et al. Impaired NFATc translocation and failure of TH2 development in itk-deficient CD4+ T cells. Immunity 11, 399–409 (1999).
Philpott, K. L. et al. Lymphoid development in mice congenitally lacking T cell receptor αβ-expressing cells. Science 256, 1448–1452 (1992).
Galli, S. J. et al. Mast cell clones: a model for analysis of cellular maturation. J. Cell Biol. 95, 435–444 (1982).
Corry, D. B. et al. Requirements for allergen-induced airway hyperreactivity in T and B cell-deficient mice. Mol. Med. 4, 344–355 (1998).
Acknowledgements
We thank C. McArthur, N. Flores and L. Stowring for technical assistance and E. Levine for statistical analysis. Animals were used in accordance with UCSF and UCB guidelines. Supported by grants NIH AI30663, HL56385 and HL66671. K. S. is supported by NIH-NIGMS-MSTP GM07618 UCSF.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Mohrs, M., Blankespoor, C., Wang, ZE. et al. Deletion of a coordinate regulator of type 2 cytokine expression in mice. Nat Immunol 2, 842–847 (2001). https://doi.org/10.1038/ni0901-842
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1038/ni0901-842