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{{short description|Family of bacteria}}
{{Automatic taxobox
{{Automatic_taxobox
|image = Elizabethkingia meningoseptica Blood agar plate.JPG
|image_alt = Elizabethkingia meningoseptica on a blood agar plate
| image = Capnocytophaga canimorsus colony on blood agar.jpg
|image_caption = ''[[Elizabethkingia meningoseptica]]'' on a [[blood agar]] plate
| image_caption = ''[[Capnocytophaga canimorsus]]'' on a [[blood agar]] plate
|taxon = Flavobacteriaceae
| taxon = Flavobacteriaceae
| authority = Reichenbach 1992<ref name="Reichenbach">{{cite book | vauthors = ((Reichenbach H.)) | chapter = Order 1. ''Cytophagales'' Leadbetter 1974, 99*= | veditors = Staley JT, Bryant MP, Pfennig N, Holt JG | title = Bergey's manual of systematic bacteriology | volume = 3 | publisher = The Williams & Wilkins Co. | location = Baltimore | year = 1989 | pages = 2011–2013}}</ref>
| subdivision_ranks = Genera
| subdivision_ranks = Genera
| subdivision =
| subdivision = See text.
''[[Actibacter]]''<br/>
''[[Aequorivita]]''<br/>
''[[Aestuariicola]]''<br/>
''[[Aestuariibaculum]]''<ref>{{cite journal|title=Aestuariibaculum|website=www.uniprot.org|url=https://www.uniprot.org/taxonomy/1386924}}</ref><br/>
''[[Algibacter]]''<br/>
''[[Aquibacter]]''<ref>{{cite journal|title=Aquibacter|website=www.uniprot.org|url=https://www.uniprot.org/taxonomy/1502303}}</ref><br/>
''[[Aquimarina]]''<br/>
''[[Arenibacter]]''<br/>
''[[Bergeyella]]''<br/>
''[[Bizionia]]''<br/>
''[[Capnocytophaga]]''<br/>
''[[Cellulophaga]]''<br/>
''[[Chryseobacterium]]''<br/>
''[[Cloacibacterium]]''<br/>
''[[Coenonia]]''<br/>
''[[Confluentibacter]]''<ref>{{cite journal|title=Confluentibacter|website=www.uniprot.org|url=https://www.uniprot.org/taxonomy/1763531|language=en}}</ref><br/>
''[[Costertonia]]''<br/>
''[[Croceibacter]]''<br/>
''[[Croceitalea]]''<br/>
''[[Croceivirga]]''<ref>{{cite journal|last1=Parte|first1=A.C.|title=Croceivirga|website=www.bacterio.net|url=http://www.bacterio.net/croceivirga.html}}</ref><br/>
''[[Cruoricaptor]]''<ref>{{cite journal|title=Cruoricaptor|website=www.uniprot.org|url=https://www.uniprot.org/taxonomy/1433995}}</ref><br/>
''[[Dokdonia]]''<br/>
''[[Donghaeana]]''<br/>
''[[Elizabethkingia]]''<br/>
''[[Empedobacter]]''<br/>
''[[Epilithonimonas]]''<br/>
''[[Flagellimonas]]''<br/>
''[[Flaviramulus]]''<br/>
''[[Flavobacterium]]''<br/>
''[[Formosa (bacteria)|Formosa]]''<br/>
''[[Gaetbulibacter]]''<br/>
''[[Galbibacter]]''<br/>
''[[Gelidibacter]]''<br/>
''[[Gillisia]]''<br/>
''[[Gilvibacter]]''<br/>
''[[Gramella]]''<br/>
''[[Joostella]]''<br/>
''[[Kaistella]]''<br/>
''[[Kordia (bacteria)|Kordia]]''<br/>
''[[Krokinobacter]]''<br/>
''[[Leeuwenhoekiella]]''<br/>
''[[Lutibacter]]''<br/>
''[[Lutimonas]]''<br/>
''[[Mangrovimonas]]''<ref>{{cite web|url=https://www.uniprot.org/taxonomy/1211036|title=Mangrovimonas|author=|date=|website=www.uniprot.org}}</ref><br/>
''[[Maribacter]]''<br/>
''[[Mariniflexile]]''<br/>
''[[Marixanthomonas]]''<br/>
''[[Mesonia]]''<br/>
''[[Moheibacter]]''<ref>{{cite web|url=https://www.uniprot.org/taxonomy/1572763|title=Moheibacter|author=|date=|website=www.uniprot.org}}</ref><br/>
''[[Muricauda (bacteria)|Muricauda]]''<br/>
''[[Myroides]]''<br/>
''[[Nonlabens]]''<br/>
''[[Ornithobacterium]]''<br/>
''[[Pibocella]]''<br/>
''[[Polaribacter]]''<br/>
''[[Psychroflexus]]''<br/>
''[[Psychroserpens]]''<br/>
''[[Riemerella]]''<br/>
''[[Robiginitalea]]''<br/>
''[[Sabulilitoribacter]]''<ref>{{cite web|url=http://www.eol.org/pages/44441071/overview|title=Sabulilitoribacter - Overview - Encyclopedia of Life|author=|date=|website=Encyclopedia of Life}}</ref><br/>
''[[Salegentibacter]]''<br/>
''[[Salinimicrobium]]''<br/>
''[[Sandarakinotalea]]''<br/>
''[[Sediminibacter]]''<br/>
''[[Sediminicola]]''<br/>
''[[Sejongia]]''<br/>
''[[Spongiimonas]]''<ref>{{cite journal | last1 = Yoon | first1 = Jaewoo | last2 = Jang | first2 = Jae-Hyuk | last3 = Kasai | first3 = Hiroaki | year = 2013 | title = ''Spongiimonas flava'' gen. nov., sp. nov., a new member of the family Flavobacteriaceae isolated from an unidentified marine sponge | journal = Antonie van Leeuwenhoek | volume = 103 | issue = 3 | pages = 625–633 | doi = 10.1007/s10482-012-9846-4 | pmid=23132279}}</ref><br/>
''[[Stenothermobacter]]''<br/>
''[[Subsaxibacter]]''<br/>
''[[Subsaximicrobium]]''<br/>
''[[Tamlana]]''<br/>
''[[Tenacibaculum]]''<br/>
''[[Ulvibacter]]''<br/>
''[[Vitellibacter]]''<br/>
''[[Wautersiella]]''<br/>
''[[Weeksella]]''<br/>
''[[Winogradskyella]]''<br/>
''[[Yeosuana]]''<br/>
''[[Zeaxanthinibacter]]''<br/>
''[[Zhouia]]''<br/>
''[[Zobellia]]''<br/>
''[[Zunongwangia]]''
}}
}}


The [[family (biology)|family]] '''Flavobacteriaceae''' is composed of environmental [[bacteria]].<ref>Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). pp. 465-466.</ref> Most species are [[Aerobic organism|aerobic]], while some are [[microaerobic]] to [[Anaerobic organism|anaerobic]]; for example ''[[Ornithobacterium]]'', ''[[Capnocytophaga]]'', and ''[[Coenonia]]''.<ref>{{cite book|chapter=An Introduction to the Family Flavobacteriaceae|title=The Prokaryotes |publisher=Springer |location=New York |year=2006 |isbn=978-0-387-25497-5|pages=455–480}}</ref>
'''Flavobacteriaceae''' is a [[family (biology)|family]] of rod-shaped [[gram negative]] bacteria. The family contains many environmental [[bacteria]],<ref name="Reichenbach"/><ref>{{cite book | title = Bergey's Manual of Systematic Bacteriology | edition = 2nd | volume = 1 (The Archaea and the deeply branching and phototrophic Bacteria) | veditors = Boone DR, Castenholz RW | publisher = Springer-Verlag | location = New York, NY | year = 2001 | pages = 465–466}}</ref> with some species being potential pathogens.<ref name=Bernardet/>

==History==
The family of ''Flavobacteriaceae'' was first proposed by Reichenbach in 1989,<ref name="Reichenbach"/> it was approved by the [[IJSEM]] in 1992.<ref name="LPSN"/> The description of the family was emended several times in 1996 and 2002.<ref name="LPSN"/><ref name=Bernardet/>{{cn|date=October 2024|reason=original emendations preferred}} In 2020, the family was split, with several genera moved to the newly established family of ''[[Weeksellaceae]]''.<ref name="García-López">{{cite journal |vauthors = García-López M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, ((Göker M.)) | title = Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of ''Bacteroidetes''
| journal = Front Microbiol | year = 2019 | volume = 10 | pages = 2083 | pmid = 31608019 | pmc = 6767994 | doi = 10.3389/fmicb.2019.02083| doi-access = free }}</ref>

==Biology==
Species of the ''Flavobacteriaceae'' are predominantly rod-shaped and stain [[gram-negative]].<ref name="Bernardet">{{cite journal |last1=Bernardet |first1 = Jean-Francois |last2=Nakagawa |first2=Yasuyoshi |last3=Holmes |first3=Barry | title = Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family | journal = International Journal of Systematic and Evolutionary Microbiology | year = 2002 | volume = 52 | issue = 3 | pages = 1049-1070 | pmid = 12054224 | doi = 10.1099/00207713-52-3-1049 | doi-access = free }}</ref>
Many species in the ''Flavobacteriaceae'' are [[motility|motile]],<ref name="García-López"/> with most non-motile species formerly placed in the family now being placed in the ''[[Weeksellaceae]]''.<ref name="García-López"/> Most species are [[Aerobic organism|aerobic]], while some are [[microaerobic]] to [[Anaerobic organism|anaerobic]]; for example ''[[Capnocytophaga]]'' and ''[[Coenonia]]''.<ref>{{cite book|chapter=An Introduction to the Family Flavobacteriaceae|title=The Prokaryotes |url=https://archive.org/details/The_Prokaryotes_Vol._1_Symbiotic_Associations_Biotechnology_Applied_Microbiology|publisher=Springer |location=New York |year=2006 |isbn=978-0-387-25497-5|pages=[https://archive.org/details/The_Prokaryotes_Vol._1_Symbiotic_Associations_Biotechnology_Applied_Microbiology/page/n499 455]–480}}</ref> Several members of the family are considered [[halophilic]] or [[psychrotolerant]].<ref name=Bernardet/> The predominant [[quinone|respiratory quinone]] is [[menaquinone-6]].<ref name=Bernardet/>

The majority of species of this family are known from a variety of environmental sources.<ref name=Bernardet/> Select species have occurred as pathogens in humans, with more genera, notably ''[[Elizabethkingia]]'', being formerly placed in this family.

==Genera==
The family Flavobacteriaceae comprises the following genera:<ref name="LPSN">{{cite web | vauthors = Euzéby JP, Parte AC | url = https://lpsn.dsmz.de/family/flavobacteriaceae | title = ''Flavobacteriaceae'' | access-date = June 29, 2021 | publisher = [[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)}}</ref>
{{div col|colwidth=250px}}
* ''[[Actibacter]]'' <small>Kim ''et al.''. 2008</small>
* ''[[Aequorivita]]'' <small>Bowman and Nichols 2002</small>
* ''[[Aestuariibaculum]]'' <small>Jeong ''et al.''. 2013</small>
<!-- Aestuariicola was reclassified as Lutimonas. -->
* ''[[Aestuariimonas]]'' <small>Park ''et al.''. 2018</small>
* ''[[Aestuariivivens]]'' <small>Park ''et al.''. 2015</small>
* ''[[Algibacter]]'' <small>Nedashkovskaya ''et al.''. 2004</small>
* ''[[Algitalea]]'' <small>Yoon ''et al.''. 2015</small>
* "''Algorimicrobium''" <small>García-López ''et al.''. 2019</small>
* "''Altibacter''" <small>Chen ''et al.''. 2014</small>
* "''Altuibacter''" <small>Chen ''et al.''. 2013</small>
* ''[[Amniculibacterium]]'' <small>Chen ''et al.''. 2020</small>
* "''Candidatus'' Amoebinatus" <small>Greub ''et al.''. 2004</small>
* ''[[Antarcticibacterium]]'' <small>Li ''et al.''. 2018</small>
* ''[[Antarcticimonas]]'' <small>Yang ''et al.''. 2014</small>
* ''[[Aquaticitalea]]'' <small>Xamxidin ''et al.''. 2016</small>
* ''[[Aquibacter]]'' <small>Hameed ''et al.''. 2014</small>
* ''[[Aquimarina]]'' <small>Nedashkovskaya ''et al.''. 2005</small>
* ''[[Arcticiflavibacter]]'' <small>Liu ''et al.''. 2016</small>
* ''[[Arenibacter]]'' <small>Ivanova ''et al.''. 2001</small>
* ''[[Arenitalea]]'' <small>Zhang ''et al.''. 2013</small>
* "''Ascidiaceibacter''" <small>Chen ''et al.''. 2018</small>
* ''[[Ascidiimonas]]'' <small>Yoon ''et al.''. 2016</small>
* ''[[Aurantiacicella]]'' <small>Teramoto ''et al.''. 2016</small>
* ''[[Aurantibacter]]'' <small>García-López ''et al.''. 2020</small>
* ''[[Aurantivirga]]'' <small>Song ''et al.''. 2015</small>
* ''[[Aureibaculum]]'' <small>Zhao ''et al.''. 2021</small>
* ''[[Aureicoccus]]'' <small>Park ''et al.''. 2013</small>
* ''[[Aureisphaera]]'' <small>Yoon ''et al.''. 2015</small>
* ''[[Aureitalea]]'' <small>Park ''et al.''. 2012</small>
* ''[[Aureivirga]]'' <small>Haber ''et al.''. 2013</small>
* "''Avrilella''" <small>Leyer ''et al.''. 2020</small>
* ''[[Bizionia]]'' <small>Nedashkovskaya ''et al.''. 2005</small>
* ''[[Capnocytophaga]]'' <small>Leadbetter ''et al.''. 1982</small>
* ''[[Cellulophaga]]'' <small>Johansen ''et al.''. 1999</small>
* ''[[Changchengzhania]]'' <small>Wang ''et al.''. 2017</small>
* "''Citreibacter''" <small>Yoon ''et al.''. 2018</small>
* ''[[Citreitalea]]'' <small>Yoon ''et al.''. 2014</small>
* "''Cochleicola''" <small>Shin ''et al.''. 2016</small>
* ''[[Coenonia]]'' <small>Vandamme ''et al.''. 1999</small>
* ''[[Confluentibacter]]'' <small>Park ''et al.''. 2016</small>
* "''Coraliitalea''" <small>Yoon ''et al.''. 2018</small>
* ''[[Corallibacter]]'' <small>Kim ''et al.''. 2012</small>
* ''[[Costertonia]]'' <small>Kwon ''et al.''. 2006</small>
* ''[[Croceibacter]]'' <small>Cho and Giovannoni 2003</small>
* ''[[Croceitalea]]'' <small>Lee ''et al.''. 2008</small>
* ''[[Croceivirga]]'' <small>Hu ''et al.''. 2017</small>
* ''[[Daejeonia]]'' <small>Siddiqi ''et al.''. 2017</small>
* ''[[Dokdonia]]'' <small>Yoon ''et al.''. 2005</small>
<!-- Donghaeana was reclassified as Nonlabens. -->
* "''Candidatus'' Endobryopsis" <small>Zan ''et al.''. 2019</small><ref>{{cite journal |vauthors=Zan J, Li Z, Tianero MD, Davis J, Hill RT, Donia MS | year = 2019 | title = A microbial factory for defensive kahalalides in a tripartite marine symbiosis | journal = Science | volume = 364 | issue = 6445 | pages = eaaw6732 | pmid = 31196985 | doi = 10.1126/science.aaw6732| s2cid = 189818260 }}</ref>
* ''[[Eudoraea]]'' <small>Alain ''et al.''. 2008</small>
* ''[[Euzebyella]]'' <small>Lucena ''et al.''. 2010</small>
* ''[[Faecalibacter]]'' <small>Chen ''et al.''. 2020</small>
* "''Feifantangia''" <small>Zheng ''et al.''. 2015</small>
<!-- Flagellimonas was reclassified as Muricauda. -->
* ''[[Flavicella]]'' <small>Teramoto and Nishijima 2015</small>
* ''[[Flavihalobacter]]'' <small>Yin ''et al.''. 2021</small>
* ''[[Flavimarina]]'' <small>Nedashkovskaya ''et al.''. 2015</small>
* ''[[Flaviramulus]]'' <small>Einen and Øvreås 2006</small>
<!-- Flavirhabdus was reclassified as Lacinutrix. -->
* ''[[Flavivirga]]'' <small>Yi ''et al.''. 2012</small>
* ''[[Flavobacterium]]'' <small>Bergey ''et al.''. 1923 (Approved Lists 1980)</small>
* ''[[Formosa (bacterium)|Formosa]]'' <small>Ivanova ''et al.''. 2004</small>
* ''[[Frondibacter]]'' <small>Yoon ''et al.''. 2015</small>
* "''Fucobacter''" <small>Sakai ''et al.''. 2002</small>
* ''[[Fulvibacter]]'' <small>Khan ''et al.''. 2008</small>
* ''[[Gaetbulibacter]]'' <small>Jung ''et al.''. 2005</small>
<!-- Gaetbulimicrobium was reclassified as Aquimarina. -->
* ''[[Galbibacter]]'' <small>Khan ''et al.''. 2007</small>
* ''[[Gangjinia]]'' <small>Lee ''et al.''. 2011</small>
* ''[[Gelatiniphilus]]'' <small>Tang ''et al.''. 2016</small>
* ''[[Gelidibacter]]'' <small>Bowman ''et al.''. 1997</small>
* ''[[Geojedonia]]'' <small>Park ''et al.''. 2013</small>
* ''[[Gillisia]]'' <small>Van Trappen ''et al.''. 2004</small>
* ''[[Gilvibacter]]'' <small>Khan ''et al.''. 2007</small>
* ''[[Gramella]]'' <small>Nedashkovskaya ''et al.''. 2005</small>
* ''[[Haloflavibacter]]'' <small>Feng ''et al.''. 2020</small>
* ''[[Hanstruepera]]'' <small>Hameed ''et al.''. 2015</small>
* "''Candidatus'' Hemobacterium" <small>Zhang and Rikihisa 2004</small>
* ''[[Hoppeia]]'' <small>Kwon ''et al.''. 2014</small>
* ''[[Hwangdonia]]'' <small>Jung ''et al.''. 2013</small>
* ''[[Hyunsoonleella]]'' <small>Yoon ''et al.''. 2010</small>
* ''[[Ichthyenterobacterium]]'' <small>Shakeela ''et al.''. 2015</small>
* ''[[Imtechella]]'' <small>Surendra ''et al.''. 2012</small>
* ''[[Jejudonia]]'' <small>Park ''et al.''. 2013</small>
* ''[[Jejuia]]'' <small>Lee ''et al.''. 2009</small>
* ''[[Joostella]]'' <small>Quan ''et al.''. 2008</small>
* ''[[Kordia (bacterium)|Kordia]]'' <small>Sohn ''et al.''. 2004</small>
* ''[[Kriegella]]'' <small>Nedashkovskaya ''et al.''. 2008</small>
<!-- Krokinobacter was reclassified as Dokdonia. -->
* ''[[Lacinutrix]]'' <small>Bowman and Nichols 2005</small>
* ''[[Leeuwenhoekiella]]'' <small>Nedashkovskaya ''et al.''. 2005</small>
* ''[[Leptobacterium]]'' <small>Mitra ''et al.''. 2009</small>
* ''[[Litoribaculum]]'' <small>Jin and Jeon 2015</small>
* ''[[Lutaonella]]'' <small>Arun ''et al.''. 2009</small>
* ''[[Lutibacter]]'' <small>Choi and Cho 2006</small>
* ''[[Lutimonas]]'' <small>Yang ''et al.''. 2007</small>
* ''[[Mangrovimonas]]'' <small>Li ''et al.''. 2013</small>
* ''[[Maribacter]]'' <small>Nedashkovskaya ''et al.''. 2004</small>
* ''[[Mariniflexile]]'' <small>Nedashkovskaya ''et al.''. 2006</small>
* ''[[Marinirhabdus]]'' <small>Wu ''et al.''. 2016</small>
* "''Marinitalea''" <small>Kim ''et al.''. 2011</small>
* ''[[Marinivirga]]'' <small>Park ''et al.''. 2013</small>
<!-- Maripseudobacter was reclassified as Maribacter. -->
* ''[[Maritimimonas]]'' <small>Park ''et al.''. 2009</small>
* ''[[Marixanthomonas]]'' <small>Romanenko ''et al.''. 2007</small>
* ''[[Meridianimaribacter]]'' <small>Wang ''et al.''. 2010</small>
* ''[[Mesoflavibacter]]'' <small>Asker ''et al.''. 2008</small>
* ''[[Mesohalobacter]]'' <small>Feng ''et al.''. 2020</small>
* ''[[Mesonia]]'' <small>Nedashkovskaya ''et al.''. 2003</small>
* ''[[Muricauda]]'' <small>Bruns ''et al.''. 2001</small>
* ''[[Muriicola]]'' <small>Kahng ''et al.''. 2010</small>
* ''[[Myroides]]'' <small>Vancanneyt ''et al.''. 1996</small>
* ''[[Namhaeicola]]'' <small>Jung ''et al.''. 2012</small>
* ''[[Neptunitalea]]'' <small>Yoon and Kasai 2015</small>
* ''[[Nonlabens]]'' <small>Lau ''et al.''. 2005</small>
* ''[[Oceanihabitans]]'' <small>Zhang ''et al.''. 2016</small>
* "''Ochrovirga''" <small>Kwon ''et al.''. 2014</small>
* ''[[Olleya]]'' <small>Mancuso Nichols ''et al.''. 2005</small>
* ''[[Paramesonia]]'' <small>Wang ''et al.''. 2020</small>
* ''[[Pareuzebyella]]'' <small>Huang ''et al.''. 2021</small>
* ''[[Patiriisocius]]'' <small>Kawano ''et al.''. 2020</small>
* ''[[Paucihalobacter]]'' <small>Wu ''et al.''. 2020</small>
* ''[[Pelagihabitans]]'' <small>Wang ''et al.''. 2020</small>
<!-- Persicivirga was reclassified as Nonlabens. -->
* ''[[Pibocella]]'' <small>Nedashkovskaya ''et al.''. 2005</small>
* ''[[Planktosalinus]]'' <small>Zhong ''et al.''. 2016</small>
* ''[[Polaribacter]]'' <small>Gosink ''et al.''. 1998</small>
* ''[[Pontimicrobium]]'' <small>Janthra ''et al.''. 2020</small>
<!-- Pontirhabdus was reclassified as Algibacter. -->
* ''[[Poritiphilus]]'' <small>Wang ''et al.''. 2020</small>
* ''[[Postechiella]]'' <small>Lee ''et al.''. 2012</small>
* ''[[Pricia]]'' <small>Yu ''et al.''. 2012</small>
* "''Candidatus'' Prosiliicoccus" <small>Francis ''et al.''. 2019</small>
* ''[[Pseudobizionia]]'' <small>Park ''et al.''. 2018</small>
* ''[[Pseudofulvibacter]]'' <small>Yoon ''et al.''. 2013</small>
* ''[[Pseudotenacibaculum]]'' <small>Huang ''et al.''. 2016</small>
* ''[[Pseudozobellia]]'' <small>Nedashkovskaya ''et al.''. 2009</small>
* ''[[Psychroflexus]]'' <small>Bowman ''et al.''. 1999</small>
* ''[[Psychroserpens]]'' <small>Bowman ''et al.''. 1997</small>
* "''Pukyongia''" <small>Kim ''et al.''. 2020</small>
* ''[[Pustulibacterium]]'' <small>Wang ''et al.''. 2013</small>
* ''[[Robertkochia]]'' <small>Hameed ''et al.''. 2014</small>
* ''[[Robiginitalea]]'' <small>Cho and Giovannoni 2004</small>
* ''[[Sabulilitoribacter]]'' <small>Park ''et al.''. 2014</small>
* ''[[Salegentibacter]]'' <small>McCammon and Bowman 2000</small>
* ''[[Salinimicrobium]]'' <small>Lim ''et al.''. 2008</small>
<!-- Sandarakinotalea was reclassified as Nonlabens. -->
* ''[[Saonia]]'' <small>Fagervold ''et al.''. 2017</small>
* ''[[Sediminibacter]]'' <small>Khan ''et al.''. 2007</small>
* ''[[Sediminicola]]'' <small>Khan ''et al.''. 2006</small>
* ''[[Seonamhaeicola]]'' <small>Park ''et al.''. 2014</small>
* ''[[Siansivirga]]'' <small>Hameed ''et al.''. 2013</small>
* ''[[Sinomicrobium]]'' <small>Xu ''et al.''. 2013</small>
* ''[[Snuella]]'' <small>Yi and Chun 2011</small>
* "''Spodiobacter''" <small>Tomida ''et al.''. 2019</small>
<!-- Spongiibacterium was reclassified as Muricauda. -->
* ''[[Spongiiferula]]'' <small>Yoon ''et al.''. 2016</small>
* ''[[Spongiimicrobium]]'' <small>Yoon ''et al.''. 2016</small>
* ''[[Spongiivirga]]'' <small>Yoon ''et al.''. 2015</small>
* "''Spongitalea''" <small>Mitra ''et al.''. 2012</small>
<!-- Stanierella was reclassified as Aquimarina. -->
<!-- Stenothermobacter was reclassified as Nonlabens. -->
* ''[[Subsaxibacter]]'' <small>Bowman and Nichols 2005</small>
* ''[[Subsaximicrobium]]'' <small>Bowman and Nichols 2005</small>
* "''Sufflavibacter''" <small>Kwon ''et al.''. 2007</small>
* ''[[Sungkyunkwania]]'' <small>Yoon ''et al.''. 2013</small>
* ''[[Taeania]]'' <small>Jung ''et al.''. 2016</small>
* ''[[Tamlana]]'' <small>Lee 2007</small>
* ''[[Tenacibaculum]]'' <small>Suzuki ''et al.''. 2001</small>
* ''[[Ulvibacter]]'' <small>Nedashkovskaya ''et al.''. 2004</small>
* ''[[Ulvibacterium]]'' <small>Zhang ''et al.''. 2021</small>
* ''[[Urechidicola]]'' <small>Shin and Yi 2020</small>
* "''Vaginella''" <small>Diop ''et al.''. 2017</small>
<!-- Vitellibacter was reclassified as Aequorivita. -->
<!-- Wangia is a misspelling of Zunongwangia. -->
* ''[[Wenyingzhuangia]]'' <small>Liu ''et al.''. 2014</small>
* ''[[Winogradskyella]]'' <small>Nedashkovskaya ''et al.''. 2005</small>
* ''[[Wocania]]'' <small>He ''et al.''. 2020</small>
* ''[[Xanthomarina]]'' <small>Vaidya ''et al.''. 2015</small>
* ''[[Yeosuana]]'' <small>Kwon ''et al.''. 2006</small>
* ''[[Zeaxanthinibacter]]'' <small>Asker ''et al.''. 2007</small>
* ''[[Zhouia]]'' <small>Liu ''et al.''. 2006</small>
* ''[[Zobellia]]'' <small>Barbeyron ''et al.''. 2001</small>
* ''[[Zunongwangia]]'' <small>corrig. Qin ''et al.''. 2007</small>
{{div col end}}

==Phylogeny==
The currently accepted taxonomy is based on the [[List of Prokaryotic names with Standing in Nomenclature]]<ref name="LPSN"/> and the phylogeny is based on whole-genome sequences.<ref name="García-López"/>{{efn|''Actibacter'', ''Aestuariibaculum'', ''Aestuariimonas'', ''Aestuariivivens'', ''Algitalea'', ''Amniculibacterium'', ''Antarcticibacterium'', ''Antarcticimonas'', ''Aquaticitalea'', ''Aquibacter'', ''Arcticiflavibacter'', ''Ascidiimonas'', ''Aurantiacicella'', ''Aurantivirga'', ''Aureibaculum'', ''Aureisphaera'', ''Aureivirga'', ''Changchengzhania'', ''Citreitalea'', ''Coenonia'', ''Corallibacter'', ''Costertonia'', ''Daejeonia'', ''Euzebyella'', ''Faecalibacter'', ''Flavicella'', ''Flavihalobacter'', ''Flavimarina'', ''Frondibacter'', ''Fulvibacter'', ''Gangjinia'', ''Gelatiniphilus'', ''Geojedonia'', ''Gilvibacter'', ''Haloflavibacter'', ''Hoppeia'', ''Hwangdonia'', ''Jejudonia'', ''Leptobacterium'', ''Litoribaculum'', ''Lutaonella'', ''Lutimonas'', ''Mariniflexile'', ''Marinivirga'', ''Maritimimonas'', ''Marixanthomonas'', ''Meridianimaribacter'', ''Mesohalobacter'', ''Namhaeicola'', ''Neptunitalea'', ''Paramesonia'', ''Pareuzebyella'', ''Patiriisocius'', ''Paucihalobacter'', ''Pelagihabitans'', ''Pibocella'', ''Planktosalinus'', ''Pontimicrobium'', ''Poritiphilus'', ''Postechiella'', ''Pseudobizionia'', ''Pseudofulvibacter'', ''Pseudotenacibaculum'', ''Robertkochia'', ''Sabulilitoribacter'', ''Saonia'', ''Sediminibacter'', ''Sediminicola'', ''Seonamhaeicola'', ''Snuella'', ''Spongiiferula'', ''Spongiimicrobium'', ''Spongiivirga'', ''Subsaxibacter'', ''Subsaximicrobium'', ''Sungkyunkwania'', ''Taeania'', ''Ulvibacterium'', ''Urechidicola'', ''Wocania'', and ''Yeosuana'' are not included in this phylogenetic tree.}}

{{Clade | style=font-size:75%;line-height:75%
|1={{clade
|label1='''''Flavobacteriaceae'''''
|1={{clade
|1={{clade
|1={{clade
|1=''[[Flavobacterium]]''
|2=''[[Myroides]]''
}}
|2={{clade
|1=''[[Capnocytophaga]]''
|2={{clade
|1={{clade
|1=''[[Pustulibacterium]]''
|2=''[[Imtechella]]''
}}
|2={{clade
|1={{clade
|1={{clade
|1=''[[Zhouia]]''
|2={{clade
|1=''[[Joostella]]''
|2=''[[Galbibacter]]''
}}
}}
|2={{clade
|1={{clade
|1={{clade
|1=''[[Aureitalea]]''
|2={{clade
|1=''[[Marinirhabdus]]''
|2={{clade
|1=''[[Ulvibacter]]''
|2=''[[Aequorivita]]''
}}
}}
}}
|2={{clade
|1={{clade
|1=''[[Nonlabens]]''
|2={{clade
|1=''[[Leeuwenhoekiella]]''
|2=''[[Dokdonia]]''
}}
}}
|2={{clade
|1=''[[Aquimarina]]''
|2={{clade
|1=''[[Croceibacter]]''
|2={{clade
|1={{clade
|1=''[[Psychroflexus]]''
|2=''[[Mesonia]]''
}}
|2={{clade
|1=''[[Salinimicrobium]]''
|2={{clade
|1=''[[Gillisia]]''
|2={{clade
|1=''[[Salegentibacter]]''
|2={{clade
|1=''[[Gramella]]''
|2=''[[Zunongwangia]]''
}}
}}
}}
}}
}}
}}
}}
}}
}}
|2={{clade
|1=''[[Kordia (bacterium)|Kordia]]''
|2={{clade
|1={{clade
|1=''[[Aurantibacter]]''
|2={{clade
|1={{clade
|1=''[[Mesoflavibacter]]''
|2=''[[Olleya]]''
}}
|2={{clade
|1=''[[Bizionia]]''
|2=''[[Flavirhabdus]]''
}}
}}
}}
|2={{clade
|1={{clade
|1=''[[Winogradskyella]]''
|2={{clade
|1=''[[Gelidibacter]]''
|2={{clade
|1=''[[Ichthyenterobacterium]]''
|2=''[[Psychroserpens]]''
}}
}}
}}
|2={{clade
|1={{clade
|1={{clade
|1=''[[Oceanihabitans]]''
|2=''[[Lacinutrix]]''
}}
|2={{clade
|1={{clade
|1=''[[Mangrovimonas]]''
|2=''[[Formosa (bacterium)|Formosa]]''
}}
|2={{clade
|1=''[[Xanthomarina]]''
|2={{clade
|1=''[[Hanstruepera]]''
|2="''Algorimicrobium''"
}}
}}
}}
}}
|2={{clade
|1={{clade
|1=''[[Tamlana]]''
|2=''[[Algibacter]]''
}}
|2={{clade
|1={{clade
|1={{clade
|1=''[[Gaetbulibacter]]''
|2=''[[Siansivirga]]''
}}
|2=''[[Confluentibacter]]''
}}
|2={{clade
|1=''[[Flavivirga]]''
|2={{clade
|1=''[[Flaviramulus]]''
|2={{clade
|1=''[[Arenitalea]]''
|2={{clade
|1=''[[Jejuia]]''
|2=''[[Hyunsoonleella]]''
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
|2={{clade
|1=''[[Sinomicrobium]]''
|2={{clade
|1={{clade
|1=''[[Aureicoccus]]''
|2={{clade
|1={{clade
|1=''[[Croceivirga]]''
|2=''[[Croceitalea]]''
}}
|2=''[[Muricauda]]''
}}
}}
|2={{clade
|1=''[[Robiginitalea]]''
|2={{clade
|1=''[[Zeaxanthinibacter]]''
|2={{clade
|1=''[[Muriicola]]''
|2={{clade
|1=''[[Eudoraea]]''
|2={{clade
|1=''[[Arenibacter]]''
|2={{clade
|1=''[[Cellulophaga]]''
|2={{clade
|1=''[[Maribacter]]''
|2={{clade
|1=''[[Kriegella]]''
|2={{clade
|1=''[[Pricia]]''
|2={{clade
|1=''[[Pseudozobellia]]''
|2=''[[Zobellia]]''
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
}}
|2={{clade
|1=''[[Wenyingzhuangia]]''
|2={{clade
|1=''[[Lutibacter]]''
|2={{clade
|1=''[[Tenacibaculum]]''
|2=''[[Polaribacter]]''
}}
}}
}}
}}
|label2=[[Outgroup (cladistics)|outgroup]]
|2=''[[Ichthyobacteriaceae]]''
}}
}}

==Notes==
{{notelist}}


==References==
==References==
Line 98: Line 443:


[[Category:Flavobacteria]]
[[Category:Flavobacteria]]
[[Category:Bacteria families]]

[[Category:Taxa described in 1989]]

{{bacteroidetes-stub}}

Latest revision as of 08:24, 1 November 2024

Flavobacteriaceae
Capnocytophaga canimorsus on a blood agar plate
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Bacteroidota
Class: Flavobacteriia
Order: Flavobacteriales
Family: Flavobacteriaceae
Reichenbach 1992[1]
Genera

See text.

Flavobacteriaceae is a family of rod-shaped gram negative bacteria. The family contains many environmental bacteria,[1][2] with some species being potential pathogens.[3]

History

[edit]

The family of Flavobacteriaceae was first proposed by Reichenbach in 1989,[1] it was approved by the IJSEM in 1992.[4] The description of the family was emended several times in 1996 and 2002.[4][3][citation needed] In 2020, the family was split, with several genera moved to the newly established family of Weeksellaceae.[5]

Biology

[edit]

Species of the Flavobacteriaceae are predominantly rod-shaped and stain gram-negative.[3] Many species in the Flavobacteriaceae are motile,[5] with most non-motile species formerly placed in the family now being placed in the Weeksellaceae.[5] Most species are aerobic, while some are microaerobic to anaerobic; for example Capnocytophaga and Coenonia.[6] Several members of the family are considered halophilic or psychrotolerant.[3] The predominant respiratory quinone is menaquinone-6.[3]

The majority of species of this family are known from a variety of environmental sources.[3] Select species have occurred as pathogens in humans, with more genera, notably Elizabethkingia, being formerly placed in this family.

Genera

[edit]

The family Flavobacteriaceae comprises the following genera:[4]

Phylogeny

[edit]

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature[4] and the phylogeny is based on whole-genome sequences.[5][a]

Flavobacteriaceae
outgroup

Ichthyobacteriaceae

Notes

[edit]
  1. ^ Actibacter, Aestuariibaculum, Aestuariimonas, Aestuariivivens, Algitalea, Amniculibacterium, Antarcticibacterium, Antarcticimonas, Aquaticitalea, Aquibacter, Arcticiflavibacter, Ascidiimonas, Aurantiacicella, Aurantivirga, Aureibaculum, Aureisphaera, Aureivirga, Changchengzhania, Citreitalea, Coenonia, Corallibacter, Costertonia, Daejeonia, Euzebyella, Faecalibacter, Flavicella, Flavihalobacter, Flavimarina, Frondibacter, Fulvibacter, Gangjinia, Gelatiniphilus, Geojedonia, Gilvibacter, Haloflavibacter, Hoppeia, Hwangdonia, Jejudonia, Leptobacterium, Litoribaculum, Lutaonella, Lutimonas, Mariniflexile, Marinivirga, Maritimimonas, Marixanthomonas, Meridianimaribacter, Mesohalobacter, Namhaeicola, Neptunitalea, Paramesonia, Pareuzebyella, Patiriisocius, Paucihalobacter, Pelagihabitans, Pibocella, Planktosalinus, Pontimicrobium, Poritiphilus, Postechiella, Pseudobizionia, Pseudofulvibacter, Pseudotenacibaculum, Robertkochia, Sabulilitoribacter, Saonia, Sediminibacter, Sediminicola, Seonamhaeicola, Snuella, Spongiiferula, Spongiimicrobium, Spongiivirga, Subsaxibacter, Subsaximicrobium, Sungkyunkwania, Taeania, Ulvibacterium, Urechidicola, Wocania, and Yeosuana are not included in this phylogenetic tree.

References

[edit]
  1. ^ a b c Reichenbach H. (1989). "Order 1. Cytophagales Leadbetter 1974, 99*=". In Staley JT, Bryant MP, Pfennig N, Holt JG (eds.). Bergey's manual of systematic bacteriology. Vol. 3. Baltimore: The Williams & Wilkins Co. pp. 2011–2013.
  2. ^ Boone DR, Castenholz RW, eds. (2001). Bergey's Manual of Systematic Bacteriology. Vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (2nd ed.). New York, NY: Springer-Verlag. pp. 465–466.
  3. ^ a b c d e f Bernardet, Jean-Francois; Nakagawa, Yasuyoshi; Holmes, Barry (2002). "Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family". International Journal of Systematic and Evolutionary Microbiology. 52 (3): 1049–1070. doi:10.1099/00207713-52-3-1049. PMID 12054224.
  4. ^ a b c d Euzéby JP, Parte AC. "Flavobacteriaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 29, 2021.
  5. ^ a b c d García-López M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Göker M. (2019). "Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes". Front Microbiol. 10: 2083. doi:10.3389/fmicb.2019.02083. PMC 6767994. PMID 31608019.
  6. ^ "An Introduction to the Family Flavobacteriaceae". The Prokaryotes. New York: Springer. 2006. pp. 455–480. ISBN 978-0-387-25497-5.
  7. ^ Zan J, Li Z, Tianero MD, Davis J, Hill RT, Donia MS (2019). "A microbial factory for defensive kahalalides in a tripartite marine symbiosis". Science. 364 (6445): eaaw6732. doi:10.1126/science.aaw6732. PMID 31196985. S2CID 189818260.
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