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Revision as of 09:29, 3 December 2017
Srinivas Aluru | |
|---|---|
| Born | Bethlehem, PA, US |
| Nationality |  American |
| Citizenship | American |
| Alma mater | Iowa State University |
| Awards | John V. Atanasoff Discovery Award (2017) IEEE Fellow (2010) AAAS Fellow (2010) Swarnajayanti Fellowship (2007-2012) IEEE Computer Society Golden Core IEEE Computer Society Meritorious Service NSF Career (1997) |
| Scientific career | |
| Fields | High performance computing, data science, bioinformatics, scientific computing, string algorithms |
| Institutions | Iowa State University Georgia Institute of Technology |
| Thesis | Distribution-independent hierarchical N-body methods |
| Doctoral advisor | John Gustafson, G.M. Prabhu |
Srinivas Aluru is a professor in the School of Computational Science and Engineering at Georgia Institute of Technology, and co-Executive Director for the Georgia Tech Interdisciplinary Research Institute in Data Engineering and Science.[1][2] His main areas of research are high performance computing, data science, bioinformatics and systems biology, combinatorial methods in scientific computing, and string algorithms. Aluru is a Fellow of the American Association for the Advancement of Science (AAAS) and the Institute for Electrical and Electronic Engineers (IEEE). He is best known for his research contributions in parallel algorithms and applications, interdisciplinary research in bioinformatics and computational biology, and particularly the intersection of these two fields.[3][4]
Education
Aluru completed his B.S. in Computer Science at the Indian Institute of Technology Madras in the year 1989. He then received M.S. and Ph.D. degrees in Computer Science in 1991 and 1994, both from Iowa State University. His doctoral thesis was "Distribution-independent hierarchical N-body methods”.
Others
- Fellow, American Association for the Advancement of Science[5]
- Fellow, Institute for Electrical and Electronics Engineers (IEEE) and IEEE Computer Society
- Member, International Society of Computational Biology
- Distinguished Member, Association for the Computing Machinery
- Member, Society for Industrial and Applied Mathematics
Selected publications
- Schnable, Patrick S.; Ware, Doreen; Fulton, Robert S.; Stein, Joshua C.; Wei, Fusheng; Pasternak, Shiran; Liang, Chengzhi; Zhang, Jianwei; Fulton, Lucinda (2009-11-20). "The B73 Maize Genome: Complexity, Diversity, and Dynamics". Science. 326 (5956): 1112–1115. doi:10.1126/science.1178534. ISSN 0036-8075. PMID 19965430.
- Ko, Pang; Aluru, Srinivas (2003-06-25). "Space Efficient Linear Time Construction of Suffix Arrays". Combinatorial Pattern Matching. Lecture Notes in Computer Science. Springer, Berlin, Heidelberg: 200–210. doi:10.1007/3-540-44888-8_15. ISBN 3540448888.
- Huang, Xiaoqiu; Wang, Jianmin; Aluru, Srinivas; Yang, Shiaw-Pyng; Hillier, LaDeana (2003-09-01). "PCAP: A Whole-Genome Assembly Program". Genome Research. 13 (9): 2164–2170. doi:10.1101/gr.1390403. ISSN 1088-9051. PMID 12952883.
- Kim, Dong Kyue; Sim, Jeong Seop; Park, Heejin; Park, Kunsoo (2003-06-25). "Linear-Time Construction of Suffix Arrays". Combinatorial Pattern Matching. Lecture Notes in Computer Science. Springer, Berlin, Heidelberg: 186–199. doi:10.1007/3-540-44888-8_14. ISBN 3540448888.
- Yu, Xiaofei; Li, Lei; Zola, Jaroslaw; Aluru, Maneesha; Ye, Huaxun; Foudree, Andrew; Guo, Hongqing; Anderson, Sarah; Aluru, Srinivas (2011-02-01). "A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana". The Plant Journal. 65 (4): 634–646. doi:10.1111/j.1365-313X.2010.04449.x. ISSN 1365-313X.
- Aluru, Srinivas (2005-12-21). Handbook of Computational Molecular Biology. CRC Press. ISBN 9781420036275.
- Yang, X.; Chockalingam, S. P.; Aluru, S. (2013-01-01). "A survey of error-correction methods for next-generation sequencing". Briefings in Bioinformatics. 14 (1): 56–66. doi:10.1093/bib/bbs015. ISSN 1467-5463.
- Aluru, Srinivas. "Space efficient linear time construction of suffix arrays". Journal of Discrete Algorithms.
- Yang, X.; Dorman, K. S.; Aluru, S. (2010-10-15). "Reptile: representative tiling for short read error correction". Bioinformatics. 26 (20): 2526–2533. doi:10.1093/bioinformatics/btq468. ISSN 1367-4803.
- Ott, Michael; Zola, Jaroslaw; Stamatakis, Alexandros; Aluru, Srinivas (2007). "Large-scale Maximum Likelihood-based Phylogenetic Analysis on the IBM BlueGene/L". Proceedings of the 2007 ACM/IEEE Conference on Supercomputing. SC '07. New York, NY, USA: ACM: 4:1–4:11. doi:10.1145/1362622.1362628. ISBN 9781595937643.
- Kalyanaraman, A. (2003-06-01). "Efficient clustering of large EST data sets on parallel computers". Nucleic Acids Research. 31 (11): 2963–2974. doi:10.1093/nar/gkg379. ISSN 0305-1048.
- Rajko, S.; Aluru, S. (December 2004). "Space and time optimal parallel sequence alignments". IEEE Transactions on Parallel and Distributed Systems. 15 (12): 1070–1081. doi:10.1109/TPDS.2004.86. ISSN 1045-9219.
- Rajko, S.; Aluru, S. (December 2004). "Space and time optimal parallel sequence alignments". IEEE Transactions on Parallel and Distributed Systems. 15 (12): 1070–1081. doi:10.1109/TPDS.2004.86. ISSN 1045-9219.
References
- ^ "Srinivas Aluru's Home". www.cc.gatech.edu. Retrieved 2017-12-03.
- ^ "Georgia Tech Meets Big Data Challenges by Uniting Under New Institute". www.news.gatech.edu. Retrieved 2017-12-03.
- ^ "NSF Announces Interagency Progress on Administration's Big Data Initiative | NSF - National Science Foundation". www.nsf.gov. Retrieved 2017-12-03.
- ^ "News - Video - Srinivas Aluru of Iowa State University works at the intersection of the life sciences and big data. | NSF - National Science Foundation". www.nsf.gov. Retrieved 2017-12-03.
- ^ "Aluru, Srinivas". AAAS - The World's Largest General Scientific Society. 2016-08-29. Retrieved 2017-12-03.