FastQCFastQC Report
Sat 11 May 2024
EGAF00008073056

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008073056
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20666032
Total Bases3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCC451930.2186825221213245No Hit
CTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATGGCCC314060.15196918305362153No Hit
GAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATGGCCCTGTGGATG261630.12659904910628225No Hit
GCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATGGCC243680.11791329849871518No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)