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update workflows
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index.ipynb

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" </p><p>\n",
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" All of the notebooks used in this tutorial can be found on <a href=\"https://github.com/djarecka/nipype_tutorial\">github.com/djarecka/nipype_tutorial</a>.\n",
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" For the tutorial, we will use a Docker container. You need to install a <a href=\"http://www.docker.com/\">Docker</a> and download a docker image that provides you a \n",
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" neuroimaging environment based on a Debian system, with working Python 3 software (including Nipype, dipy, matplotlib,\n",
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" nibabel, nipy, numpy, pandas, scipy, seaborn and more), FSL, AFNI, ANTs and SPM12 (no license needed). \n",
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" TODO\n",
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" neuroimaging environment based on a Debian system, with working Python 3 software (including Nipype, matplotlib,\n",
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" nibabel, numpy, pandas, scipy, and more), FSL, AFNI, ANTs and SPM12 (no license needed).\n",
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" </p><p>\n",
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" For everything that isn't covered in this tutorial, check out the <a href=\"http://nipype.readthedocs.io/en/latest/\">main homepage</a>. \n",
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" </p>\n",
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython3",
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"version": "3.6.0"
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"version": "3.6.2"
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}
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},
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"nbformat": 4,

notebooks/example_1stlevel.ipynb

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notebooks/example_2ndlevel.ipynb

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notebooks/example_metaflow.ipynb

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],
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"metadata": {
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"kernelspec": {
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"display_name": "Python [default]",
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"display_name": "Python 3",
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"language": "python",
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"name": "python2"
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"name": "python3"
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},
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"language_info": {
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"codemirror_mode": {
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"name": "ipython",
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"version": 2
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"version": 3
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},
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"file_extension": ".py",
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"mimetype": "text/x-python",
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython2",
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"version": "2.7.13"
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"pygments_lexer": "ipython3",
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"version": "3.6.2"
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}
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},
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"nbformat": 4,

notebooks/example_normalize.ipynb

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notebooks/example_preprocessing.ipynb

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