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Update pybids to 0.7
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+64
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Singularity

Lines changed: 2 additions & 2 deletions
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@@ -122,7 +122,7 @@ sync && conda clean -tipsy && sync
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bash -c "source activate neuro
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pip install --no-cache-dir \
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https://github.com/nipy/nipype/tarball/master \
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https://github.com/INCF/pybids/tarball/0.6.5 \
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https://github.com/INCF/pybids/tarball/0.7 \
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nilearn \
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datalad[full] \
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nipy \
@@ -232,7 +232,7 @@ echo '{
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\n ],
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\n "pip_install": [
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\n "https://github.com/nipy/nipype/tarball/master",
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\n "https://github.com/INCF/pybids/tarball/0.6.5",
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\n "https://github.com/INCF/pybids/tarball/0.7",
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\n "nilearn",
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\n "datalad[full]",
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\n "nipy",

generate.sh

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Original file line numberDiff line numberDiff line change
@@ -17,7 +17,7 @@ generate_docker() {
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conda_install="python=3.6 pytest jupyter jupyterlab jupyter_contrib_nbextensions
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traits pandas matplotlib scikit-learn scikit-image seaborn nbformat nb_conda" \
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pip_install="https://github.com/nipy/nipype/tarball/master
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https://github.com/INCF/pybids/tarball/0.6.5
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https://github.com/INCF/pybids/tarball/0.7
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nilearn datalad[full] nipy duecredit nbval" \
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create_env="neuro" \
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activate=True \
@@ -55,7 +55,7 @@ generate_singularity() {
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conda_install="python=3.6 pytest jupyter jupyterlab jupyter_contrib_nbextensions
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traits pandas matplotlib scikit-learn scikit-image seaborn nbformat nb_conda" \
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pip_install="https://github.com/nipy/nipype/tarball/master
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https://github.com/INCF/pybids/tarball/0.6.5
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https://github.com/INCF/pybids/tarball/0.7
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nilearn datalad[full] nipy duecredit nbval" \
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create_env="neuro" \
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activate=True \

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