Merge pull request #1 from satra/julia-mp2rage

juhuntenburg · web-flow · commit 49dee4327f41 · 2017-06-06T12:04:57.000+02:00
fix: check before commit
diff --git a/README.rst b/README.rst
@@ -33,7 +33,7 @@ NIPYPE: Neuroimaging in Python: Pipelines and Interfaces
 .. image:: https://img.shields.io/badge/gitter-join%20chat%20%E2%86%92-brightgreen.svg?style=flat
     :target: http://gitter.im/nipy/nipype
     :alt: Chat
-    
+
 .. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.581704.svg
    :target: https://doi.org/10.5281/zenodo.581704
 
diff --git a/nipype/interfaces/fsl/ICA_AROMA.py b/nipype/interfaces/fsl/ICA_AROMA.py
@@ -109,7 +109,7 @@ def _list_outputs(self):
         else:
             outputs['out_dir'] = self._gen_filename('out_dir')
         out_dir = outputs['out_dir']
-        
+
         if self.inputs.denoise_type in ('aggr', 'both'):
             outputs['aggr_denoised_file'] = os.path.join(out_dir, 'denoised_func_data_aggr.nii.gz')
         if self.inputs.denoise_type in ('nonaggr', 'both'):
@@ -120,4 +120,4 @@ def _gen_filename(self, name):
         if name == 'out_dir':
             return os.getcwd()
 
-    
+
diff --git a/nipype/interfaces/mipav/tests/test_auto_JistIntensityMp2rageMasking.py b/nipype/interfaces/mipav/tests/test_auto_JistIntensityMp2rageMasking.py
@@ -26,16 +26,16 @@ def test_JistIntensityMp2rageMasking_inputs():
     ),
     null=dict(argstr='--null %s',
     ),
-    outMasked=dict(argstr='--outMasked %s',
+    outMasked=dict(argstr='--outMasked_T1_Map %s',
     hash_files=False,
     ),
-    outMasked2=dict(argstr='--outMasked2 %s',
+    outMasked2=dict(argstr='--outMasked_T1weighted %s',
     hash_files=False,
     ),
-    outSignal=dict(argstr='--outSignal %s',
+    outSignal=dict(argstr='--outSignal_Proba %s',
     hash_files=False,
     ),
-    outSignal2=dict(argstr='--outSignal2 %s',
+    outSignal2=dict(argstr='--outSignal_Mask %s',
     hash_files=False,
     ),
     terminal_output=dict(nohash=True,
