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Description
scipy tests started failing today with numpy from travis-dev-wheels.
The failure is in mstats: https://travis-ci.org/scipy/scipy/builds/120882377
The failing test does this:
In [1]: from scipy.stats import mstats
In [2]: %paste
x = [1, 3, 5, 7, 9]
y = [2, 4, 6, 8, 10]
## -- End pasted text --
In [3]: mstats.kruskal(x, y)
---------------------------------------------------------------------------
ValueError Traceback (most recent call last)
<ipython-input-3-5edb46bc91da> in <module>()
----> 1 mstats.kruskal(x, y)
/home/br/virtualenvs/np/local/lib/python2.7/site-packages/scipy/stats/mstats_basic.pyc in kruskal(*args)
1047 ngrp = ranks.count(-1)
1048 ntot = ranks.count()
-> 1049 H = 12./(ntot*(ntot+1)) * (sumrk**2/ngrp).sum() - 3*(ntot+1)
1050 # Tie correction
1051 ties = count_tied_groups(ranks)
/home/br/repos/numpy/build/testenv/lib/python2.7/site-packages/numpy/ma/core.pyc in __truediv__(self, other)
3983 if self._delegate_binop(other):
3984 return NotImplemented
-> 3985 return true_divide(self, other)
3986
3987 def __rtruediv__(self, other):
/home/br/repos/numpy/build/testenv/lib/python2.7/site-packages/numpy/ma/core.pyc in __call__(self, a, b, *args, **kwargs)
1126 # Get the result
1127 with np.errstate(divide='ignore', invalid='ignore'):
-> 1128 result = self.f(da, db, *args, **kwargs)
1129 # Get the mask as a combination of the source masks and invalid
1130 m = ~umath.isfinite(result)
ValueError: operands could not be broadcast together with shapes (2,) (2,5)
and bisecting indicates
$ git bisect bad
36f76ea2e6e91062df12d3a46ccaed7822bc82f2 is the first bad commit
commit 36f76ea2e6e91062df12d3a46ccaed7822bc82f2
Author: Allan Haldane <allan.haldane@gmail.com>
Date: Sun Feb 14 02:49:19 2016 -0500
ENH: add extra kwargs and update doc of many MA methods
Updated any, all, sum, prod, cumsum, cumprod, min, max, argmin, argmax,
mean, var
:040000 040000 e41cfd58bb4bbabc11471a0bd443b24be91b45d0 7f99716492632508bc4d664d424c7cf22d6cd5cb M numpy
which is, it seems, gh-5706?
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