FIX: fixes ICBM template clean-up command

miykael · miykael · commit 2893c70211c6 · 2018-03-24T08:01:41.000+01:00
diff --git a/create_dockerfile.sh b/create_dockerfile.sh
@@ -22,7 +22,7 @@ docker run --rm kaczmarj/neurodocker:master generate -b neurodebian:stretch-non-
 --run 'mkdir /output && chmod 777 /output && chmod a+s /output' \
 --user=neuro \
 --run-bash 'source activate neuro && cd /data && datalad install -r ///workshops/nih-2017/ds000114 && cd ds000114 && datalad get -r sub-01/ses-test/anat sub-01/ses-test/func/*fingerfootlips*' \
---run-bash 'curl -L https://files.osf.io/v1/resources/fvuh8/providers/osfstorage/580705089ad5a101f17944a9 -o /data/ds000114/derivatives/fmriprep/mni_icbm152_nlin_asym_09c.tar.gz && tar xf /data/ds000114/derivatives/fmriprep/mni_icbm152_nlin_asym_09c.tar.gz -C /data/ds000114/derivatives/fmriprep/. && rm /data/ds000114/derivatives/fmriprep/mni_icbm152_nlin_asym_09c.tar.gz && find /data/ds000114/derivatives/fmriprep -type f -not -name ?mm_T1.nii.gz -not -name ?mm_brainmask.nii.gz -not -name ?mm_tpm*.nii.gz -delete -delete' \
+--run-bash 'curl -L https://files.osf.io/v1/resources/fvuh8/providers/osfstorage/580705089ad5a101f17944a9 -o /data/ds000114/derivatives/fmriprep/mni_icbm152_nlin_asym_09c.tar.gz && tar xf /data/ds000114/derivatives/fmriprep/mni_icbm152_nlin_asym_09c.tar.gz -C /data/ds000114/derivatives/fmriprep/. && rm /data/ds000114/derivatives/fmriprep/mni_icbm152_nlin_asym_09c.tar.gz && find /data/ds000114/derivatives/fmriprep/mni_icbm152_nlin_asym_09c -type f -not -name ?mm_T1.nii.gz -not -name ?mm_brainmask.nii.gz -not -name ?mm_tpm*.nii.gz -delete' \
 --copy . "/home/neuro/nipype_tutorial" \
 --user=root \
 --run 'chown -R neuro /home/neuro/nipype_tutorial' \
