MNT bump to Cython=3.0.10 (#28743)

lorentzenchr · web-flow · commit 713cacac2e74 · 2024-04-03T16:39:38.000+02:00
diff --git a/asv_benchmarks/asv.conf.json b/asv_benchmarks/asv.conf.json
@@ -78,7 +78,7 @@
     "matrix": {
         "numpy": ["1.25.2"],
         "scipy": ["1.11.2"],
-        "cython": ["3.0.9"],
+        "cython": ["3.0.10"],
         "joblib": ["1.3.2"],
         "threadpoolctl": ["3.2.0"],
         "pandas": ["2.1.0"]
diff --git a/build_tools/azure/debian_atlas_32bit_lock.txt b/build_tools/azure/debian_atlas_32bit_lock.txt
@@ -8,7 +8,7 @@ attrs==23.2.0
     # via pytest
 coverage==7.4.4
     # via pytest-cov
-cython==3.0.9
+cython==3.0.10
     # via -r build_tools/azure/debian_atlas_32bit_requirements.txt
 iniconfig==2.0.0
     # via pytest
diff --git a/build_tools/azure/debian_atlas_32bit_requirements.txt b/build_tools/azure/debian_atlas_32bit_requirements.txt
@@ -1,7 +1,7 @@
 # DO NOT EDIT: this file is generated from the specification found in the
 # following script to centralize the configuration for CI builds:
 # build_tools/update_environments_and_lock_files.py
-cython==3.0.9  # min
+cython==3.0.10  # min
 joblib==1.2.0  # min
 threadpoolctl==2.2.0
 pytest==7.1.2  # min
diff --git a/build_tools/azure/pylatest_pip_openblas_pandas_linux-64_conda.lock b/build_tools/azure/pylatest_pip_openblas_pandas_linux-64_conda.lock
@@ -45,7 +45,7 @@ https://repo.anaconda.com/pkgs/main/linux-64/pip-23.3.1-py39h06a4308_0.conda#685
 # pip ninja @ https://files.pythonhosted.org/packages/6d/92/8d7aebd4430ab5ff65df2bfee6d5745f95c004284db2d8ca76dcbfd9de47/ninja-1.11.1.1-py2.py3-none-manylinux1_x86_64.manylinux_2_5_x86_64.whl#sha256=84502ec98f02a037a169c4b0d5d86075eaf6afc55e1879003d6cab51ced2ea4b
 # pip numpy @ https://files.pythonhosted.org/packages/54/30/c2a907b9443cf42b90c17ad10c1e8fa801975f01cb9764f3f8eb8aea638b/numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl#sha256=f870204a840a60da0b12273ef34f7051e98c3b5961b61b0c2c1be6dfd64fbcd3
 # pip packaging @ https://files.pythonhosted.org/packages/49/df/1fceb2f8900f8639e278b056416d49134fb8d84c5942ffaa01ad34782422/packaging-24.0-py3-none-any.whl#sha256=2ddfb553fdf02fb784c234c7ba6ccc288296ceabec964ad2eae3777778130bc5
-# pip pillow @ https://files.pythonhosted.org/packages/87/0d/8f5136a5481731c342a901ff155c587ce7804114db069345e1894ab4978a/pillow-10.2.0-cp39-cp39-manylinux_2_28_x86_64.whl#sha256=b6f491cdf80ae540738859d9766783e3b3c8e5bd37f5dfa0b76abdecc5081f13
+# pip pillow @ https://files.pythonhosted.org/packages/f5/6d/52e82352670e850f468de9e6bccced4202a09f58e7ea5ecdbf08283d85cb/pillow-10.3.0-cp39-cp39-manylinux_2_28_x86_64.whl#sha256=1dfc94946bc60ea375cc39cff0b8da6c7e5f8fcdc1d946beb8da5c216156ddd8
 # pip pluggy @ https://files.pythonhosted.org/packages/a5/5b/0cc789b59e8cc1bf288b38111d002d8c5917123194d45b29dcdac64723cc/pluggy-1.4.0-py3-none-any.whl#sha256=7db9f7b503d67d1c5b95f59773ebb58a8c1c288129a88665838012cfb07b8981
 # pip pygments @ https://files.pythonhosted.org/packages/97/9c/372fef8377a6e340b1704768d20daaded98bf13282b5327beb2e2fe2c7ef/pygments-2.17.2-py3-none-any.whl#sha256=b27c2826c47d0f3219f29554824c30c5e8945175d888647acd804ddd04af846c
 # pip pyparsing @ https://files.pythonhosted.org/packages/9d/ea/6d76df31432a0e6fdf81681a895f009a4bb47b3c39036db3e1b528191d52/pyparsing-3.1.2-py3-none-any.whl#sha256=f9db75911801ed778fe61bb643079ff86601aca99fcae6345aa67292038fb742
diff --git a/build_tools/azure/pymin_conda_defaults_openblas_environment.yml b/build_tools/azure/pymin_conda_defaults_openblas_environment.yml
@@ -20,4 +20,4 @@ dependencies:
   - ccache
   - pip
   - pip:
-    - cython==3.0.9  # min
+    - cython==3.0.10  # min
diff --git a/build_tools/azure/pymin_conda_defaults_openblas_linux-64_conda.lock b/build_tools/azure/pymin_conda_defaults_openblas_linux-64_conda.lock
@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 3101707abf2e5303981d1a1f9f49fa86dd30ecb408ccf0c708f243008e4deb55
+# input_hash: 3d6bcb087065974114c1567c8dccd947a7376a7503b3514d82904299b651692d
 @EXPLICIT
 https://repo.anaconda.com/pkgs/main/linux-64/_libgcc_mutex-0.1-main.conda#c3473ff8bdb3d124ed5ff11ec380d6f9
 https://repo.anaconda.com/pkgs/main/linux-64/blas-1.0-openblas.conda#9ddfcaef10d79366c90128f5dc444be8
@@ -96,4 +96,4 @@ https://repo.anaconda.com/pkgs/main/linux-64/pyamg-4.2.3-py39h79cecc1_0.conda#af
 https://repo.anaconda.com/pkgs/main/linux-64/qt-main-5.15.2-h53bd1ea_10.conda#bd0c79e82df6323f638bdcb871891b61
 https://repo.anaconda.com/pkgs/main/linux-64/pyqt-5.15.10-py39h6a678d5_0.conda#52da5ff9b1144b078d2f41bab0b213f2
 https://repo.anaconda.com/pkgs/main/linux-64/matplotlib-3.3.4-py39h06a4308_0.conda#384fc5e01ebfcf30e7161119d3029b5a
-# pip cython @ https://files.pythonhosted.org/packages/77/0c/4e9ead9733a92d96d2638fce41450d94f36d091a81e1d97b4fd51b6ad09c/Cython-3.0.9-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl#sha256=2fd198c1a7f8e9382904d622cc0efa3c184605881fd5262c64cbb7168c4c1ec5
+# pip cython @ https://files.pythonhosted.org/packages/a7/f5/3dde4d96076888ceaa981827b098274c2b45ddd4b20d75a8cfaa92b91eec/Cython-3.0.10-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl#sha256=651a15a8534ebfb9b58cb0b87c269c70984b6f9c88bfe65e4f635f0e3f07dfcd
diff --git a/build_tools/azure/python_nogil_lock.txt b/build_tools/azure/python_nogil_lock.txt
@@ -11,7 +11,7 @@ contourpy==1.1.1
     # via matplotlib
 cycler==0.12.1
     # via matplotlib
-cython==3.0.9
+cython==3.0.10
     # via -r /scikit-learn/build_tools/azure/python_nogil_requirements.txt
 exceptiongroup==1.2.0
     # via pytest
diff --git a/build_tools/azure/ubuntu_atlas_lock.txt b/build_tools/azure/ubuntu_atlas_lock.txt
@@ -4,7 +4,7 @@
 #
 #    pip-compile --output-file=build_tools/azure/ubuntu_atlas_lock.txt build_tools/azure/ubuntu_atlas_requirements.txt
 #
-cython==3.0.9
+cython==3.0.10
     # via -r build_tools/azure/ubuntu_atlas_requirements.txt
 exceptiongroup==1.2.0
     # via pytest
diff --git a/build_tools/azure/ubuntu_atlas_requirements.txt b/build_tools/azure/ubuntu_atlas_requirements.txt
@@ -1,7 +1,7 @@
 # DO NOT EDIT: this file is generated from the specification found in the
 # following script to centralize the configuration for CI builds:
 # build_tools/update_environments_and_lock_files.py
-cython==3.0.9  # min
+cython==3.0.10  # min
 joblib==1.2.0  # min
 threadpoolctl==2.0.0  # min
 pytest<8
diff --git a/build_tools/circle/doc_linux-64_conda.lock b/build_tools/circle/doc_linux-64_conda.lock
@@ -103,7 +103,7 @@ https://conda.anaconda.org/conda-forge/linux-64/zlib-1.2.13-hd590300_5.conda#68c
 https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.5-hfc55251_0.conda#04b88013080254850d6c01ed54810589
 https://conda.anaconda.org/conda-forge/linux-64/blosc-1.21.5-h0f2a231_0.conda#009521b7ed97cca25f8f997f9e745976
 https://conda.anaconda.org/conda-forge/linux-64/brotli-bin-1.1.0-hd590300_1.conda#39f910d205726805a958da408ca194ba
-https://conda.anaconda.org/conda-forge/linux-64/c-blosc2-2.13.2-hb4ffafa_0.conda#976aaf1afd331ed7346d649da5c5c1ee
+https://conda.anaconda.org/conda-forge/linux-64/c-blosc2-2.14.0-hb4ffafa_0.conda#ffe4b89c7e3335f2e12faf13fa077115
 https://conda.anaconda.org/conda-forge/linux-64/freetype-2.12.1-h267a509_2.conda#9ae35c3d96db2c94ce0cef86efdfa2cb
 https://conda.anaconda.org/conda-forge/linux-64/gcc-12.3.0-h95e488c_3.conda#413e326f8a01d041ffbfbb51cea46a93
 https://conda.anaconda.org/conda-forge/linux-64/gcc_linux-64-12.3.0-h6477408_3.conda#7a53f84c45bdf4656ba27b9e9ed68b3d
diff --git a/build_tools/circle/doc_min_dependencies_environment.yml b/build_tools/circle/doc_min_dependencies_environment.yml
@@ -8,7 +8,7 @@ dependencies:
   - numpy=1.19.5  # min
   - blas
   - scipy=1.6.0  # min
-  - cython=3.0.9  # min
+  - cython=3.0.10  # min
   - joblib
   - threadpoolctl
   - matplotlib=3.3.4  # min
diff --git a/build_tools/circle/doc_min_dependencies_linux-64_conda.lock b/build_tools/circle/doc_min_dependencies_linux-64_conda.lock
@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 52b954ec9f522fd3b628f8be5b431f2f482e6abae2fca6ae31af8d727a337609
+# input_hash: 32601810330a8200864f7908d07d870a3a58931be4f833691b2b5c7937f2d330
 @EXPLICIT
 https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81
 https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.2.2-hbcca054_0.conda#2f4327a1cbe7f022401b236e915a5fef
@@ -117,7 +117,7 @@ https://conda.anaconda.org/conda-forge/noarch/click-8.1.7-unix_pyh707e725_0.cond
 https://conda.anaconda.org/conda-forge/noarch/cloudpickle-3.0.0-pyhd8ed1ab_0.conda#753d29fe41bb881e4b9c004f0abf973f
 https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_0.tar.bz2#3faab06a954c2a04039983f2c4a50d99
 https://conda.anaconda.org/conda-forge/noarch/cycler-0.12.1-pyhd8ed1ab_0.conda#5cd86562580f274031ede6aa6aa24441
-https://conda.anaconda.org/conda-forge/linux-64/cython-3.0.9-py39h3d6467e_0.conda#82f4e576cbe74921703f91d3b43c8a73
+https://conda.anaconda.org/conda-forge/linux-64/cython-3.0.10-py39h3d6467e_0.conda#76b5d215fb735a6dc43010ffbe78040e
 https://conda.anaconda.org/conda-forge/linux-64/dbus-1.13.6-h5008d03_3.tar.bz2#ecfff944ba3960ecb334b9a2663d708d
 https://conda.anaconda.org/conda-forge/linux-64/docutils-0.19-py39hf3d152e_1.tar.bz2#adb733ec2ee669f6d010758d054da60f
 https://conda.anaconda.org/conda-forge/noarch/exceptiongroup-1.2.0-pyhd8ed1ab_2.conda#8d652ea2ee8eaee02ed8dc820bc794aa
diff --git a/pyproject.toml b/pyproject.toml
@@ -34,7 +34,7 @@ classifiers=[
 ]
 
 [project.optional-dependencies]
-build = ["numpy>=1.19.5", "scipy>=1.6.0", "cython>=3.0.9", "meson-python>=0.15.0"]
+build = ["numpy>=1.19.5", "scipy>=1.6.0", "cython>=3.0.10", "meson-python>=0.15.0"]
 install = ["numpy>=1.19.5", "scipy>=1.6.0", "joblib>=1.2.0", "threadpoolctl>=2.0.0"]
 benchmark = ["matplotlib>=3.3.4", "pandas>=1.1.5", "memory_profiler>=0.57.0"]
 docs = [
@@ -84,7 +84,7 @@ build-backend = "mesonpy"
 # Minimum requirements for the build system to execute.
 requires = [
     "meson-python>=0.15.0",
-    "Cython>=3.0.9",
+    "Cython>=3.0.10",
     "numpy>=1.25",
     "scipy>=1.6.0",
 ]
diff --git a/sklearn/_min_dependencies.py b/sklearn/_min_dependencies.py
@@ -8,7 +8,7 @@
 JOBLIB_MIN_VERSION = "1.2.0"
 THREADPOOLCTL_MIN_VERSION = "2.0.0"
 PYTEST_MIN_VERSION = "7.1.2"
-CYTHON_MIN_VERSION = "3.0.9"
+CYTHON_MIN_VERSION = "3.0.10"
 
 
 # 'build' and 'install' is included to have structured metadata for CI.

Original file line number	Diff line number	Diff line change
`@@ -4,7 +4,7 @@`
`4`	`4`	`#`
`5`	`5`	`# pip-compile --output-file=build_tools/azure/ubuntu_atlas_lock.txt build_tools/azure/ubuntu_atlas_requirements.txt`
`6`	`6`	`#`
`7`		`-cython==3.0.9`
	`7`	`+cython==3.0.10`
`8`	`8`	`# via -r build_tools/azure/ubuntu_atlas_requirements.txt`
`9`	`9`	`exceptiongroup==1.2.0`
`10`	`10`	`# via pytest`