(Q33262962)

24 July 2017

title

A comparative analysis of genome-wide chromatin immunoprecipitation data for mammalian transcription factors (English)

1 reference

24 July 2017

Steven A Vokes

2

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author name string

Hongkai Ji

series ordinal

1

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24 July 2017

Wing H Wong

series ordinal

3

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24 July 2017

language of work or name

English

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publication date

7 November 2006

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24 July 2017

published in

Nucleic Acids Research

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24 July 2017

volume

34

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24 July 2017

issue

21

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24 July 2017

page(s)

e146

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The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells

24 July 2017

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21 June 2018

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21 June 2018

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Genome-wide prediction of mammalian enhancers based on analysis of transcription-factor binding affinity

21 June 2018

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21 June 2018

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Core transcriptional regulatory circuitry in human embryonic stem cells

21 June 2018

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21 June 2018

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Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

21 June 2018

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Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1

21 June 2018

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Sampling motifs on phylogenetic trees

21 June 2018

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De novo cis-regulatory module elicitation for eukaryotic genomes

21 June 2018

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A boosting approach for motif modeling using ChIP-chip data

21 June 2018

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21 June 2018

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21 June 2018

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Decoding human regulatory circuits

21 June 2018

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21 June 2018

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21 June 2018

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Eukaryotic regulatory element conservation analysis and identification using comparative genomics

21 June 2018

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Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

21 June 2018

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Integrating regulatory motif discovery and genome-wide expression analysis

21 June 2018

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An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments

21 June 2018

1 reference

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Detection of cis-element clusters in higher eukaryotic DNA.

21 June 2018

1 reference

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Regulatory element detection using correlation with expression.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669715

The gene for the embryonic stem cell coactivator UTF1 carries a regulatory element which selectively interacts with a complex composed of Oct-3/4 and Sox-2.

21 June 2018

1 reference

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New POU dimer configuration mediates antagonistic control of an osteopontin preimplantation enhancer by Oct-4 and Sox-2

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669715

Identification of regulatory regions which confer muscle-specific gene expression.

21 June 2018

1 reference

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Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment

21 June 2018

1 reference

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Developmental-specific activity of the FGF-4 enhancer requires the synergistic action of Sox2 and Oct-3

21 June 2018

1 reference

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Fitting a mixture model by expectation maximization to discover motifs in biopolymers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669715

Estrogen-responsive element of the human pS2 gene is an imperfectly palindromic sequence

21 June 2018

1 reference

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The GLI gene encodes a nuclear protein which binds specific sequences in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669715

Phylogenetic motif detection by expectation-maximization on evolutionary mixtures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669715

Human-mouse genome comparisons to locate regulatory sites

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669715

31 October 2018

Identifiers

DOI

10.1093/NAR/GKL803

1 reference

24 July 2017

1 reference

24 July 2017

1 reference