Nitrogen Cycle Report

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The Biogeochemical Cycles

Nitrogen Cycle
Nitrogen

Nitrogen
-one of the most essential elements
-used to produce a number of complex molecules like
amino acids, nucleic acids and lipids
- covers 78% of the earth atmosphere
-cannot be used by most of the living organisms until
fixed
Nitrogen

+
N2 AMMONIFICATION
SYNTHESIS
FIXATION NH
Amino
NH43
Ammonium
Atmospheric
Nitrogen
acids
Ammonia
Nitrogen Cycle

Nitrogen Cycle
-the movement of nitrogen between the earth and the
atmosphere
-consists of a series of processes that convert nitrogen
gas to organic substances and these back to nitrogen in
nature
- nitrogen cycle can be broken down into five types of
reactions
Anammox
Reactions of Nitrogen Cycle
• Nitrogen fixation
• Ammonification
• Nitrification
• Denitrification
• Anammox
Nitrogen Fixation

Nitrogen Fixation
N2 FIXATION
NH3
Atmospheric Ammonia
Nitrogen
-reduction of atmospheric nitrogen to ammonia
-requires alot of energy to break the N2 bond
Nitrogen Fixation

Ways to Fix Nitrogen


1. Atmospheric Fixation- using enormous energy of lightning
to break nitrogen molecules
2. Industrial Fixation- use of atmospheric nitrogen and
hydrogen as a catalyst under a great temperature(600°C)
3. Biological Fixation- fixation of nitrogen-fixing bacteria
Nitrogen Fixation

Nitrogen-Fixing Bacterias
-contain an enzyme complex called nitrogenase
- use at least 16 ATP on each N2
Nitrogenase
-catalyst in the nitrogen-fixation
-it supplies oxygen and ATP
-consists of two distinct proteins, dinitrogenase and
dinitrogenase reductase
Examples of nitrogen-fixing bacteria (*photosynthetic bacterium)

Nitrogen Cycle
Free living Symbiotic with plants
Aerobic Anaerobic Legumes Other plants
Azotobacter Clostridium (some) Rhizobium Frankia
Beijerinckia Desulfovibrio Azospirillum
Klebsiella (some) Purple sulphur bacteria*
Cyanobacteria (some)* Purple non-sulphur
bacteria*
Green sulphur bacteria*

*Examples of nitrogen-fixing bacteria (*photosynthetic bacterium)


Red nitrogen-fixing nodules on the roots of a black alder
tree. The nodules contain symbiotic Frankia sp. bacteria

Nodules on the roots


of soybean plants
containing
Rhizobium sp. bacteria
Desulfovibrio sapovorans

Desulfovibrio vulgaris

Desulfovibrio desulfuricans
Ammonification

Ammonification
-decomposition process that converts organic nitrogen
into ammonia (NH3) or ammonium in neutral environment
-performed by a large variety of organism, aerobes and
anaerobes as well as fungi(decomposers)
Ammonification

Ammonification Process
1. Initially done through the action of extracellular
proteolytic enzymes
2. The breakdown products goes into the cell
3. Release of ammonium
Streptomyces coelicolor colonies

Bacillus cereus colonies on
sheep blood agar plate
Nitrification

Nitrification
-oxidation of ammonia or ammonium to nitrate
-done by a group of bacteria collectively known as nitrifiers
-a cooperative two-step process
Nitrification

Nitrification Process
1. Nitrosomonas (ammonia-oxidizing bacteria), oxidizes
ammonia to nitrite(Nitritation)
2. Nitrospira (nitrite-oxidizing bacteria) oxidizes nitrite to
nitrate (Nitratation)
- -
NH3 NITRITATION
NO 2
NITRATATION
NO 3
Ammonia Nitrite Nitrate
Nitrosomonas sp. bacteria
Uptake of Pyruvate by
Nitrosomonas(green) and Nitrospira(red).
Taken via microautoradiography
Denitrification

Denitrification
-conversion of nitrates into primarily nitrogen gas but also
nitrous oxide
-done by denitrifying bacterias

- N2 + N2O
NO 3
NITRITATION

Nitrate Atmospheric Nitrous


Nitrogen Oxide
Denitrification

Environmental Consequences of Denitrification


-N2O can be photochemically oxidized to NO in the
atmosphere. NO reacts with the ozone (O 3) in the to form
nitrite (NO2-), and this returns to Earth as nitric acid
(HNO2).
thinning of ozone layer
formation of acid rain
Pseudomonas aeruginosa (XLD)Xylose Paracoccus denitrificans
lysine deoxycholate agar plate
Annamox

Annamox
-oxidation of ammonium under anaerobic conditions to
form atmospheric nitrogen(N2)
-bacteria capable of this process possess a special
membrane-bound organelle called annamoxosomes
+ N2 +2H2O
NH + NO2-
4
ANNAMOX

Ammonium Atmospheric water


Nitrate
Nitrogen
Groups of annamox bacteria
• Brocadia
• Kuenenia
• Anammoxoglobus
• Jettenia (all fresh water species)
• Scalindua(marine species)
Reaction Microorganism Conditions Process
Nitrogen Nitrogen-fixing Aerobic/ The first step in the synthesis of virtually all
fixation bacteria e.g. anaerobic nitrogenous compounds. Nitrogen gas is fixed into
Rhizobium forms other organisms can use.

Ammonification Ammonifying bacteria Aerobic/ The decomposers, certain soil bacteria and fungi,
(decay) (decomposers) anaerobic break down proteins in dead organisms and animal
wastes, releasing ammonium ions which can be
converted to other nitrogen compounds.

Nitrification Nitrifying bacteria Aerobic Nitrification Nitrifying bacteria Aerobic Nitrification


(e.g. Nitrosomonas, is a two-step process. Ammonia or ammonium ions
Nitrobacter) are oxidized first to nitrites and then to nitrates,
which is the form most usable by plants.

Denitrification Denitrifying bacteria Anaerobic Nitrates are reduced to nitrogen gas, returning
nitrogen to the air and completing the cycle.

Annamox Bacterias with Anaerobic Ammonium ions are oxidize to nitrogen gas, thus
annamoxosomes returning the nitrogen in the atmosphere
Anammox

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