Rapid Sterility Testing Using Pallchek
Rapid Sterility Testing Using Pallchek
Rapid Sterility Testing Using Pallchek
INTRODUCTION
The quality attributes of manufactured pharmaceutical product include the physical, chemical, and microbiological characteristics of the raw materials, excipients, active pharmaceutical ingredient (API) as well as the final drug product (Table 17.1). Absence of microbiological contamination is considered a critical quality attribute due to its potential to dramatically impact, directly or indirectly, the safety and/or the efficacy of the drug product. Sterile, is a medieval word derived from the Latin sterilis (unfruitful), meaning, in modern terms, free from living germs or microorganisms. In pharmaceutical manufacturing, it is critical to 433
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Table 17.1 Definitions of quality attributes Quality Attribute (QA) A physical, chemical or microbiological property or characteristic of a material Key Quality Attribute (KQA) potential to impact product quality or process effectiveness associated analytical method Critical Quality Attribute (CQA) directly or indirectly impacts the safety or efficacy of a drug product
assure sterility of sterile products in order to release aseptic and safe medicines to patients. Therefore, the importance of adequate and effective microbiological controls cannot be overstated enough. Sterility testing is performed to evaluate a finished pharmaceutical product as a batch release quality control test by following the requirements delineated in the compendia (USP <71>, 2011a; EP Section 2.1.6, 2010a; JP, 2006). The test is used to determine the presence or absence of viable, multiplying microorganisms (bacteria, yeast and fungi) under standardized growth conditions. As the sterility test is a very exacting procedure, it is performed by qualified personnel under tightly controlled environmental conditions where strict asepsis is ensured, maintained and monitored (USP, <71> 2011a; FDA, 2004). Current harmonized compendial sterility test methods using either membrane filtration or direct inoculation require at least 14 days of incubation. In cases where drug products either possess an intrinsic turbidity, or because of their formulation become opaque or cloudy during the incubation period, identification of microbial contamination based on visual confirmation of turbidity of growth media becomes difficult. In such instances, at the end of the 14-day incubation, a portion of the sample is sub-cultured into fresh medium for an additional 45 days to allow detection, further extending the incubation period. This and similar transfer/dilution
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steps used for sterility testing of suspension products are time consuming and may compromise test integrity by introducing additional risk for contamination. In general, the complexity of the test procedure and required lengthy test period contribute to increased cost of manufacturing. The replacement or the supplement of the conventional sterility test by a rapid microbiology test will have significant benefits. A rapid method has the potential to produce test results much faster at enhanced sensitivity. In addition, a test based on current technologies can increase throughput and allow better data handling. The shortened time to results would allow the reduction of warehousing, a timely distribution of the drug product to the market, a better understanding and control of the manufacturing process and most importantly, a greater assurance of product safety. Currently, a number of alternative rapid microbiology methods that are based on various biophysical principles including ATP bioluminescence, nucleic acid amplification, vital dye/auto florescence, pH change and spectroscopic detection, are available. An ideal rapid method for sterility testing of a particular group of products, in addition to being equivalent and/or better than the traditional method, must be simple, economic and relatively easy to implement.
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A large number of alternative microbiological test platforms were evaluated, trying to identify the best match between QC and manufacturing process requirements and the capabilities of a particular rapid assay. Some of the characteristics considered in the rapid system selection process are summarized as follows. A method compatible with an initial membrane filtration step therefore allowing flexibility in the sample volume. Good references from previous customers and excellent vendor technical support. Relatively low maintenance and cost. Portable, requiring minimum laboratory bench space. Simple training and ease of use. Easy verification of proper system operation prior to use. Standard specific kit allowing corroboration of calibration and operation. Results in units that can be reasonably correlated to Colony Forming Units (CFU) of the traditional method. Previous validation experience. Detection of viable cells, including those that cannot grow in the compendia media or they could be injured or stressed as a result of manipulations or sanitization procedures applied during manufacturing (i.e., viable but non culturable (VBNC)), assuring better QC. A method compatible with the addition of a short growth step (enrichment) prior to assay to differentiate viable and culturable cells from those VBNC. Simple qualitative (presence/absence) procedure. Sensitivity down to one CFU-equivalent (see below) with enrichment. Minimal sample manipulation.
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Upon consideration, the Pallchek Rapid Microbiology system (Pall Life Sciences, Port Washington, NY) was selected because it matched most of the criteria described above. For our application, where very low levels of microbial contamination were expected in the samples submitted to the sterility test, the incubation of the membrane filter in liquid growth medium (enrichment) prior to the bioluminescence assay processing, mimics the traditional test (i.e., a growth based method using similar media and incubation conditions), making the comparability study easier to interpret. This enrichment step has the intention to allow detection down to one microbial cell or cell aggregate (i.e., the equivalent of 1 CFU detected in a conventional agar plate method) present in the original sample in a period of time shorter than the 14 days required in the traditional method for a broad range of microorganisms. The work detailed in the next sections was designed to demonstrate the previous assertion and, if verified, determine the shortest incubation time needed for detection of very low counts of a broad range of microorganisms.
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of ATP used and can be measured in Relative Light Units (RLU) by a luminometer. In microbiological tests using bioluminescence, where microorganisms are the source of ATP in the reaction, the luminescence measured in RLU can be correlated to the number of microbial cells present in a sample.
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(enrichment step). This enrichment step allows detection down to one cell (the equivalent to one CFU as counted on a traditional agar plate) for a broad range of microorganisms.
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Organism Escherichia coli Aspergillus brasiliensis Bacillus subtilis Candida albicans Clostridium sporogenes Pseudomonas aeruginosa Staphylococcus aureus Bacillus subtilis Acinetobacter baumannii Aspergillus fumigatus Methylobacterium rhodesianum Micrococcus luteus Paenibacillus macerans Penicillium chrysogenum Ralstonia pickettii Propionibacterium acnes
2025
FTM
3035
Gram negative Mold Gram negative slow grower Gram positive Gram positive spore former Mold Gram negative Gram positive, anaerobic, slow grower Gram negative, anaerobic
Environmental
TSB
2025
Environmental
FTM
3035
Bacteroides vulgatus
negative bacteria (aerobic and anaerobic) to represent a wide spectrum of possible microbial contaminants. The use of reference microorganisms offers various advantages, including comparability of data and commercial availability in convenient formats. However, it is important that studies also include organisms that reflect the typical bioburden of manufacturing environment and the test material to allow proper interpretation of test data. In total 16 strains were used in these studies (Table 17.2). The cultures were diluted to
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<1, 5 or 50 CFU per 100 L as required. Growth promotion of nutrient media, as well as identification of challenge organisms were performed as appropriate. In principle, any growth media and incubation condition may be used and validated for a method which utilizes the Pallchek Rapid Microbiology System. However, it is advisable to restrict growth conditions to those that are well established and recognized by regulatory authorities, unless a different growth condition offers a special advantage. The following commonly used media and rinse agents were used Tryptone Soy Agar (TSA), Sabouraud Dextrose Agar (SDA), Fluid Thioglycollate Medium (FTM), Fluid A and Sodium Chloride 0.9% w/v Solution. Samples were filtered using GN-6 membrane (0.45 m) (Pall Life Sciences PN 4800). The use of disposable MicroFunnel filter funnels allows the filtration of sample, washing of filter membrane and incubation of the membrane in growth media all in one filter unit, without the need to transfer the filter membrane. MicroFunnel filter funnels are convenient to use and also minimize the risk of contamination.
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holder, and bioluminescence measured as described by the manufacturer (Pall Life Sciences USTR 2358). The output in RLU was recorded. The time it took to obtain a reading was less than one minute including the reagent addition. The presence of microorganisms is determined when the RLU value is greater than the background RLU value as determined, based on a predefined threshold value. For studies that required multiple sampling from an enrichment culture, a proportionately larger volume of sample and media were used for incubation.
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Table 17.3 System Suitability Test Sample Aluminum Plate Aluminum Plate + Sample Holder Aluminum Plate + Sample Holder + Pallchek Reagents Enzyme activity; positive control: Aluminium plate + sample holder +100L ATP (109 M)+ 100L Enzyme TSB Negative Control (membrane filtrated, two washes of saline) RLU 11 (<20) 11 (<20) 14 (<80) 105 (105) 220 ( 1000)
Measurements are the average of duplicates. Acceptance criteria are shown in parenthesis
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value was established at a RLU value higher than eight times the average background level (Table 17.4). A value above this threshold value indicates presence of microorganism.
Table 17.4 Background Luminescence value Mean Standard Deviation 95% Confidence Interval Threshold RLU value 131.4 60.5 103.1159.7 1000
Sterile TBS samples were incubated for 24hrs at 35C, membrane filtered, washed with sterile saline and assayed.Values are expressed in RLU, n= 20.
Linearity
The bioluminescence based sterility test as outlined here is a qualitative presenceabsence test. Test for linearity is a validation parameter generally reserved for a quantitative assay (USP <1223>, 2011b). However, the designation of presence or absence using Pallchek depends on an initial quantitative determination of RLU by the luminometer. It is therefore important to determine if within the range of the detection limits of equipment, a predictable relationship exists between RLU and concentration of ATP. Figure 17.2 shows a typical RLU/ATP correlation curve where a very good linear relationship is observed (R2 > 0.95).
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Figure 17.2 Linearity
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ATP and enzyme stability: correlation curve using ATP and enzyme preparation exposed to room temperature for various times, R2 is shown in parenthesis
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Bioluminescence undergoes decay with time. The signal is more stable at higher ATP concentration and starts to diminish after 30 seconds particularly at lower ATP concentrations. The data are consistent with those obtained by Pall (Pall Life Sciences). It is therefore very important to perform the detection within 10 seconds of the initiation of the reaction to assure accurate and repeatable measurements (Pall Life Sciences USTR 2359) (Figure 17.5).
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TSB negative control 105 106 107 108 109 1010 1011
The results shown in Table 17.6 correspond to a study using the Acinetobacter baumannii culture. The rapid sterility test method was able to detect 5 cells of A. baumannii within 17 hrs, which was faster than the time to visual detection (Table 17.6). No visual growth was observed at 17 hrs in the enrichment sample spiked with 5 cells of A. baumannii (time to visual observation of growth was within 48 hrs). However, the sample was confirmed to be positive by Pallchek Rapid Microbiology System at that earlier time. In summary, the Pallchek Rapid Microbiology System provided faster sterility results for A. baumannii than the traditional sterility method of visual observation for microbial growth. Contamination by all challenge organisms was detected in all instances (specificity) at a very low microbial inoculum level. Table 17.7 summarizes the time to detection for various microorganisms. The length of incubation time (enrichment) for a starting count of 15 cells of any of the listed microorganisms required to achieve a detection using the bioluminescence assay was 48 hours. Under similar conditions, the time to visual detection for the traditional method was 96 hours.
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Table 17.7 Time to detection of samples spiked at time 0 with 15 cells Organism Time to detection (hrs) Pallchek 24 20 20 20 48 48 28 48 17 24 22 22 24 18 22 17 Time to detection (hrs) Visual 24 20 20 20 96 48 28 96 48 24 24 48 24 48 72 48
Escherichia coli Bacillus subtilis Staphylococcus aureus Pseudomonas aeruginosa Aspergillus brasiliensis Candida albicans Bacteroides vulgatus Propionibacterium acnes Paenibacillus macerans Ralstonia pickettii Micrococcus luteus Methylobacterium rhodesianum Bacillus pumilus Penicillium chrysogenum Aspergillus fumigatus Acinetobacter baumannii
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The next two sections describe the feasibility studies of the rapid sterility test using pharmaceutical samples (eight commonly-used excipients and one drug product). Sterile samples were spiked with inocula containing a low count (<5 cells) of a number of compendial reference and environmental strains, and tested after various times of incubation (enrichment) either by a traditional method (membrane filtration and/or plate count) or the rapid method (bioluminescence).
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Table 17.8 Bioluminescence assays conducted in the presence of excipients (1% in TSB)
Excipient Gram Positive B. subtilis S. aureus Gram Negative E. coli P. aeruginosa S. enterica Yeast/Mold C. albicans A. brasiliensis
Microcrystalline Cellulose Lactose Gelatin Magnesium Stearate Ethanol Polypropylene Glycol Mannitol Starch
Checkmark represents successful detection comparable to parallel controls run in the absence of excipient
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shown). These results were reproduced over several experiments. In the presence of DP, M. rhodesianum could not be detected at the end of 120 hrs of incubation (Figure 17.6). An additional attempt to detect M. rhodesianum in the presence of DP was done by running parallel samples incubated either in TSB or in FTM. A weak value barely above the threshold value was obtained after 120 hours of incubation in FTM. A control culture of M. rhodesianum in TSB alone was also run and confirmed the identity of the isolate by colony morphology and Gram stain. All suitability controls and confirming plate counts were within expected ranges for all of the above experiments.
SUMMARY
Release sterility testing is the critical quality control test that defines the acceptability of a manufactured drug product as aseptically safe to be administered to a patient. This assay, therefore, must be designed, validated and executed following the most stringent QC guidance and aseptic techniques. Technicians competence, the ability of media used in sterility test to support microbial growth, the conformity of the test environment to the requirements of the Pharmacopoeia in terms of viable microbial air and surface counts must be demonstrated and documented. In addition, procedures for sampling, testing and follow-up must be defined in the validation procedures. The validation and implementation of a rapid method must also comply with the previous requirements and new parameters must be validated so that they relate more directly to the characteristics inherent to the mechanism of detection of the new assay. In addition, important consideration must be assigned to demonstrate that the new procedure does not have any chance of producing either false positives or, very importantly, false negatives (FDA, 2004). Based on the data presented and discussed in this chapter, the Pallchek system constitutes a reliable rapid method for sterility testing that is equivalent or better than the traditional assay. Overview schematics of a rapid sterility test using the Pallchek Microbiology System is shown in Figure 17.7.
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Figure 17.7 Overview of sterility test using Pallchek Rapid Microbiology System
The results of the feasibility study on the application of the rapid microbiological Pallchek Rapid Microbiology System to a rapid sterility test for a selected drug product were shown to be very encouraging. This drug product is a suspension which confers turbidity to the culture media and prevents visual inspection at the end of the 14-day incubation period. According to the traditional procedure, an aliquot of the incubated sample is inoculated into fresh, sterile media at day 14 and further tested for an additional five days. Since the inherent turbidity of the product does not interfere with the bioluminescence assay, the use of the Pallchek Rapid Microbiology System allows readings in samples from the original incubation container and detects contaminants in a period of time as short as five days, instead of the required 14+5 days prescribed in the traditional standard operating procedure (SOP) developed for this drug product. Of the 16 reference and environmental isolate microorganisms tested all but one (M. rhodesianum) were detected by 120 hr. One possible explanation may be that DP1 is not amenable to growth of M. rhodesianum. This particular isolate was not available at the time of the original validation studies for the traditional test. Therefore, there is no data
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precedent to this study. Additional studies will be required to confirm this initial observation. Rapid microbiological methods can be applied to a broad range of quality control operations, such as purified and process water testing, raw materials and excipients testing, environmental monitoring, in-process monitoring, manufacturing process design, investigations and final products release testing. The latter is arguably the most critical test because of the immediate impact that any failure or undetected contamination could have in the patient population. The data discussed throughout the chapter strongly suggest that a rapid sterility test using the Pallchek Rapid Microbiology System provides results in a timely manner that are equivalent to or better than those obtained in the traditional method. The use of an incubation (enrichment) phase during a period of time significantly shorter that the 14 days of the conventional method contribute to an easier interpretation and comparability of the results since both the rapid and the traditional assays rely on growth of the microorganisms under conditions similar to those described in the pharmacopoeia (USP <71>, 2011a; EP Section 2.1.6, 2010a; JP, 2006). In addition, the implementation of the rapid method described here potentially presents the following advantages: Reduced warehouse space and costs for raw materials Intermediates and final products fast final-product release shorter product release cycle times time and labor savings in the lab, during manufacturing Decreased plant downtime Reduced cycle times reduction of backorders reduction or elimination of product losses increased manufacturing capabilities Risk reduction in manufacturing Increased business and production flexibility
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Rapid Sterility Testing Increased product development capabilities Robust understanding of manufacturing processes Proactive control: move from QC to QA procedures Immediate detection and correction of contamination Immediate cleaning validation Better protection of customers and company image.
In the decision making for the implementation of a rapid sterility test, a translation from the potential advantages delineated above to actual return of investment (ROI) dollars is essential. The ROI exercise should comprise calculations on the cost of the traditional test, the cost of implementing the rapid method, and a detailed analysis of the savings generated by the RMM (Yvon, 2008; Gadal and Yvon, 2009). The analysis should apply to a period of time from one to five years and should include comparative data between conventional and rapid methods, including: number of tests per year and price per test total testing time (hours) and labor cost (per hour) equipment (investment in new equipment, depreciation, calibration, qualification) lab space and environment test requirements disposal of used plates, reagents, etc. cleaning, preparation and downtime operation time time to results validation documents training maintenance contracts.
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We have found that the relatively low cost and simplicity of the Pallchek luminometer, along with the time and cost savings from early contaminant detection, significantly facilitates the required calculations, showing ROI figures that can be realized in just 12 years, depending on test volumes, cost of warehousing and cost avoidances on additional investigations. Overall, the results described in this chapter demonstrate that the Pallchek Rapid Microbiology System provides a significant time saving for the detection of microorganisms within media that are visually occluded due to the cloudy suspension characteristics of the drug product studied in the work reported here. Based on the encouraging results that the Pallchek Microbiology System provided with this drug product, plans are being considered to running a comparability study of this method in parallel to the harmonized compendial sterility test method at a manufacturing site for a period of three to six months, using actual batch samples of manufactured product.
Acknowledgments
We would like to thank Michael Baumstein, Amber Dellar, Karen Boeve and John Shabushnig for their support and insightful information and advice during the development of this work. In addition, we are grateful to Michael Boquet for his excellent technical assistance during the early stage of these studies.
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Microbiology, P. E. Stanley, B. J. McCarthy, and R. Smither, Eds., Blackwell Scientific Publications, Oxford, England, 111. Pall Life Sciences. Testing Procedures and Applications for the Pallchek Rapid Microbiology System, USTR 2358, Pall Life Sciences, Port Washington, New York. Pall Life Sciences. Validation Guide for the Pallchek Rapid Microbiology System. USTR 2359. Pall Life Sciences, Port Washington, New York. USP (2011a) Chapter <71> Sterility Tests. USP 34-NF 29. The United States Pharmacopeial Convention/National Formulary, Rockville, MD. USP (2011b) Chapter <1223> Validation of Alternative Microbiological Methods. USP 34-NF 29. The United States Pharmacopeial Convention/National Formulary, Rockville, MD. White, E.W., McCapara, F., Field, G.F., McElroy W.D. (1961) The Structure and Synthesis of Firefly Luciferin. Journal of American Chemical Society 83: 24022403. Yvon, P. (2008) Rapid Methods: Return of Investments. Podium Presentation at Plenary Session 4 Rapid Methods. PDA 3rd Global Conference on Pharmaceutical Microbiology, Chicago, IL.
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Team Achievement Award, Pfizer Global R&D Individual Achievement Award, two Pfizer Individual Performance Awards, two Supply Chain Recognition Awards, and the United States National Hispanic Corporate Achiever Award. He has received distinguished fellowships and visiting investigator positions from the Public Health Research Institute of the City of New York, the University of Sao Paulo, the Autnoma University of Madrid, and the PNUD-UNESCO. He has authored over 250 patents, book chapters, journal articles and technical presentations in the areas of biochemistry, microbiology, cell and molecular biology, and pharmaceutical sciences. Dr. Denoya holds a Ph.D. in Biochemistry and Molecular Genetics of Animal Viruses, a M.S. in Biochemistry and Microbiology, and a B.S. in Clinical Biochemistry from the University of Buenos Aires.
Jennifer Reyes is a Microbiologist who joined Pfizer in 2006 and has worked on the development of Rapid Microbiological Methods (RMMs) in the area of detection of microbial contaminants in pharmaceutical products. Prior to Pfizer, Jennifer worked as a Microbiologist for Amgen and before that for Monsanto in the area of Quality Control Assay Development. Jennifer received her B.S. and M.S. degrees in Microbiology from the University of Rhode Island.
Maitry Ganatra is Global Product Manager with Pall Life Sciences and is responsible for managing the process monitoring product portfolio and directing global cross functional team on new products. She has more than 10 years of business development experience with Life Sciences products. Prior to joining Pall, she led Microbiology Validation Program at Claris Life Sciences. She has authored many scientific publications and is committee member of PDA Task force for Revision of Technical Report No. 13 on Environmental Monitoring. Dr. Ganatra holds a Diploma in Pharmacy, Ph.D. in Microbiology (Gujarat University) and currently pursuing MBA at Long Island University.
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Daniel A. Eshete M,D. PhD., holds a Doctor of Medicine (Addis Ababa University), M.Sc. in Biochemistry (Addis Ababa University/KI) and Ph.D. in Chemical Pathology (University of Cape Town) with Post-Doctoral studies in Microbiology/ Immunology at Karoliniska Institute, Microbiology and Tumour Biology Centre (Stockholm) and St. Louis University Division of Infectious Diseases (St Louis, MO). Prior to moving to the Biomedical Industry he worked in academia teaching Biochemistry, Clinical Chemistry and Instrumentation. His research works have been focused on cellular signal transduction, and the molecular basis of host parasite interaction and microbial infection. Since joining the industry his focus has mainly been on Pharmaceutical Quality Control with particular emphasis in rapid microbiological methods development and validation. Dr. Eshete is currently a staff scientist and a member of the Process Monitoring and Pharmaceutical QC team at Pall Life Sciences, Scientific & Laboratory Services.
Reprinted from Rapid Sterility Testing, edited by Jeanne Moldenhauer. Copyright 2011, co-published by PDA and DHI. All rights reserved.