Discovering Chemistry Printable PDF
Discovering Chemistry Printable PDF
● explain what is meant by isotopes, atomic numbers and mass numbers of the atoms
of chemical elements
● indicate ways in which the chemical periodicity represented by the periodic table is
reflected in the electronic structure of atoms
● explain how the molecular structure of chemical compounds is linked to their
macroscopic properties
● understand ionic, covalent and metallic bonding
● construct balanced chemical equations for reactions
● use the Lewis structures of some simple chemical substances to illustrate the ideas
of the octet rule, the electron-pair bond, and rationalise the three-dimensional
structure of molecules
● select a set of organic molecules, each of which contains the same functional group,
and use its reactions to show why the functional group concept is useful
● understand the use of the mole as a measure of the amount of a substance
● appreciate various facets of chemical reactions, why they occur and how fast they
go, and the role of catalysts.
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Get started with Session 1 .
Learning Outcomes
After studying Session 1 you should be able to:
● describe the structure of atoms in terms of protons, neutrons and electrons
● understand what is meant by a chemical element and how they are arranged in the
periodic table
● explain what is meant by atomic number and relative atomic mass of a chemical
element
● appreciate the impact of quantum mechanics on understanding how electrons are
arranged in atoms.
1 Atoms
The idea that everything that you can see is an assembly of tiny particles called atoms is
chemistry’s greatest contribution to science.
But this isn’t a new idea.
In fact an early proposal came from the Greek philosopher Democritus (460 – 370BC),
often known as the ‘laughing philosopher’ as he was always keen to promote the
importance of being cheerful, although other accounts suggest he was laughing at and
ridiculing the misfortunes of others and refer to him as the ‘mocker’.
Democritus proposed that no matter how many times you cut something in half, and half
again, and half again, eventually you will reach a point when you cannot divide it up any
further. This led him to propose that everything is built up from tiny individual particles. In
fact atom in Greek translates as ‘not’ and ‘cut’. Democritus along with another philosopher
of the time Epicurus (340-270BC) believed in a world made of tiny, hard atoms in endless
motion.
It wasn’t until the 19th century, and the work of English chemist, physicist and
meteorologist John Dalton that atoms became part of modern science; even in 1900 there
were eminent scientists who did not believe that atoms are real. However, between
1900 and 1920 phenomena as varied as the motion of pollen grains in water, diffusion in
liquids, radioactivity and the diffraction of X-rays by crystals, all gave similar values for the
sizes of atoms. The merging of evidence from such different directions pretty much
destroyed any serious opposition to the existence of atoms.
The final nail in the coffin of the doubters was the emergence of instruments capable of
producing images of atoms and molecules. This was realised in the 1980s, with the
invention of the Scanning Tunnelling Microscope (STM). Importantly, atomic sizes
measured using this technique agreed with those obtained from the earlier experiments.
Figure 1 shows a ring of 48 iron atoms on a copper surface observed by STM.
However, despite being originally thought to be indivisible, atoms are built up from a
number of smaller components.
If you look inside the atom you will find at its centre the nucleus, this is positively charged
and contains nearly all of its mass. Around the nucleus move much tinier negatively
charged particles called electrons. The positive charge of the nucleus is balanced by the
negative charge of the electrons, so overall an atom carries no electrical charge. The
electrons themselves circle huge distances from the nucleus, moving at speeds close to
the speed of light.
So, in fact most of an atom is empty space!
Returning to the nucleus, its positive charge is provided by positively charged particles
called protons. These are very tightly packed in the nucleus, and your immediate thought
might be they would repel one another. However, although we won’t go into details here,
there exists a force which holds the nucleus together – a sort of atomic ‘superglue’
ensuring this doesn’t happen.
The number of protons in its nucleus, is used to define a unique atomic number for each
atom.
Answer
As atoms are neutral, the number of positive charges has to equal the number of
negative charges, so the number of electrons = number of protons. Thus atomic
number must also equal the number of electrons.
So far, you have focussed on the submicroscopic, invisible (to the naked eye) world of an
atom.
How does this translate into something you can actually see?
This question will be answered in the next section.
The atomic number of the element lithium is 3, How many protons are in the nucleus,
and how many electrons are orbiting the nucleus?
Answer
There are 3 protons, and given the atom is an uncharged (neutral) species this charge
must be balanced by 3 electrons.
The elements may solids, liquids or gases at room temperature, and some examples,
together with their chemical symbols are shown in Figure 2.
Figure 2 Some chemical elements (a) aluminium, (b) sodium, (c) sulfur, (d) bromine, (e)
chlorine, (f) copper. Note that sodium is extremely reactive and as shown here, it is kept
under oil to prevent reaction with air or water
What is the state of matter of each of the elements shown in Figure 1.2?
Answer
Aluminium, sodium, sulfur and copper are solids. Bromine is a liquid and chlorine is
a gas.
So at this point you have a picture of the basic structure of an atom, however there is one
further subatomic particle to consider. This will be introduced in the next section.
But there are further particles that can reside there; these have the same mass as protons
but carry no charge. They are called neutrons.
Why is the word ‘can’ used above? Which atom does not contain any neutrons in its
nucleus?
Answer
Hydrogen. You’ll recall this has an atomic number of one. So its nucleus can only
contain one proton.
The relative charges and relative masses of electrons, protons and neutrons are shown in
Table 1. Notice how tiny electrons are compared to protons and neutrons.
So in addition to an atomic number, atoms are also defined by their mass, or more
precisely what is know as their mass number, where.
Mass number = number of protons + number of neutrons.
And elements can be represented as follows:
1.3 Isotopes
You will recall, way back in the nineteenth century, John Dalton popularised the idea of
matter being composed of atoms. More specifically he proposed that the atoms of each
element are identical, especially in mass.
The discovery of isotopes meant this description, whilst fine up to a point, doesn’t tell the
whole story.
All atoms of the same element have identical atomic numbers. But sometimes the number
of neutrons in the nucleus can vary for a particular element. This means you can have
atoms of the same element with different mass numbers.
Atoms having identical numbers of protons but different numbers of neutrons are called
isotopes.
Let's have another look at hydrogen.
You’ve seen hydrogen represented as , but there are also two isotopes of hydrogen which
contain neutrons. These are deuterium having one proton and one neutron, and tritium
with 1 proton plus two neutrons.
Figure 3 The distribution of protons, neutrons and electrons in the atoms of the two
isotopes of copper
To reiterate, even though they have different numbers of neutrons, both of the atoms in
Figure 3 are still copper.
Account for the mass numbers of the two copper isotopes shown in Figure 2.
Answer
Adding up the protons and neutrons we get: 29 + 34 = 63 and 29 + 36 = 65.
Figure 4 Symbol showing the number of neutrons, protons and electrons in one of the
isotopes of copper
Answer
Six protons and six neutrons.
Answer
24
Consider again copper, if you look it up on a periodic table you’ll find its relative atomic
mass is quoted as 63.5.
But what does this figure represent? How can you have half a proton or half a neutron?
The answer is, you can’t.
In fact this is an average value, and what the number represents is the relative abundance
of each isotope, in other words how much there is of each one in a sample of the element
concerned.
Sticking with copper for the moment; the atoms of natural copper are about 70% and 30%
. So, the relative atomic mass of natural copper (63.5) lies between 63 and 65, but closer
to 63 because that is the relative atomic mass of the more abundant isotope.
Chlorine has two naturally occurring isotopes, 35Cl and 37Cl. On average, out of every
four chlorine atoms you will find three are 35Cl and one is 37Cl. What is the average
relative atomic mass of a chlorine atom?
Answer
(3/4 X 35) + (1/4 X 37) = 35.5
To summarise then, the relative atomic mass of an element is the weighted average of the
masses of its isotopes relative to one twelfth of the mass of an atom of carbon-12.
1.5 Ions
Now let’s look at electrical charges associated with atoms.
Answer
The number of positively protons in the nucleus is balanced by the number of
negatively charged electrons orbiting it.
However electrically charged versions of atoms do exist – these are ions. And as you’ll
see later, molecules can also form ions.
Take, for example an atom of lithium.
When it forms compounds (Session 2), lithium exists as lithium ions, represented by Li+.
These are positively charged species formed by the removal of an electron from the
lithium atom. Taking away an electron means there is an overall positive charge on the
species as the positive charge of the nucleus is now greater than the negative charge due
to the electrons.
Answer
No the composition of the nucleus is unchanged, you are just taking away an electron
– remember these are located outside the nucleus.
How does this observation support the picture of the atom described in section 1.1?
Answer
Remember that alpha particles are positively charged; any deflection would be due to
interaction with other positive charges. The beams that occasionally bounced back
suggest there is a concentrated centre of positive charge – the nucleus. And as most
alpha particles passed through the foil, this supports the idea that ‘an atom is mainly
empty space’.
With the exception of the lowest energy level (n=1), shells are divided into sub-shells (or
sub-levels of energy), and each sub-shell is specified by a second quantum number l. This
is also known as the orbital quantum number, or the angular momentum quantum number.
So how are n and l related?
For each shell of principle quantum number n, l can take integer values from zero up to
(n-1).
How many subshells are there in a shell having principle quantum number 3? Assign
an l value to each sub-shell.
Answer
There are 3, which take values l= 0, 1 and 2.
An alternative way of specifying sub-shells uses letters in place of the quantum number l.
The following letters are used:
So in the previous question, the 3 sub-shells in the n = 3 energy level are: 3s, 3p and 3d.
What sub-shells are found in the shell having principal quantum number, n = 4?
Answer
4s, 4p, 4d and 4f.
Figure 6 The sub-shells in the shells of principal quantum numbers 1-4, and the maximum
number of electrons that each type of sub-shell can hold
Answer
One
So the question is; into what sub-shell does this electron go?
The answer is pretty intuitive – it goes into the lowest available energy level.
The lowest energy shell is defined by the principal quantum number n = 1, and this
contains an s sub-shell (only). So that’s where the single electron in hydrogen goes.
This is denoted 1s1, where 1 represents the main energy level (the shell) and s is the
subshell. The superscript 1 represents the single electron occupying this energy level.
But what about more complicated atoms, i.e. those with greater atomic numbers than
one? This is covered in the next section.
Figure 7 A pathway showing the order in which the sub-shells should be filled when
writing out the electronic configurations of atoms
Consider fluorine, this has an atomic number of 9, which means there are 9 electrons to fit
into the subshells shown in Figure 7.
Bearing in mind the maximum number of electrons a sub-shell can hold (shown in
Figure 6), the electrons in a fluorine atom will be arranged as follows:
Two electrons will be in the lowest energy 1s subshell.
Two electrons will be in the higher energy 2s subshell.
This leaves another five electrons which occupy the 2p subshell.
So using the notation introduced earlier, the electronic configuration for fluorine may be
written:
1s2 2s2 2p5.
Now have a go at the following examples (remember you’ll need to refer back to
Figure 7 ).
What are the electronic configurations of lithium (atomic number 3), silicon (atomic
number 14) and potassium (atomic number 19)?
Answer
Lithium: 1s2 2s1
Silicon: 1s2 2s2 2p6 3s2 3p2
Potassium: 1s2 2s2 2p6 3s2 3p6 4s1
You probably noticed a quirk in the expected order of energy level filling which became
apparent when you got to potassium. The 4s sub-shell is at lower energy than the 3d
subshell. So this means the 4s shell fills with electrons before the 3d.
Try the following example which also highlights this point.
Answer
1s2 2s2 2p6 3s2 3p6 4s2 3d2
What are the electronic configurations of the following elements (these are the ones
shown in Figure 1)?
(a) aluminium (atomic number 13), (b) sodium (atomic number 11), and copper (atomic
number 29).
Answer
Al: 1s2 2s2 2p6 3s2 3p1
Na: 1s2 2s2 2p6 3s1
Cu: 1s2 2s2 2p6 3s2 3p6 4s2 3d9
What is the origin of the colours when solutions of metal ions in alcohol were sprayed
into the flame of a gas burner?
Answer
The heat of the flame excites electrons in the metal ions to higher energy levels, when
they drop back down light having wavelengths characteristic of the specific metal ion is
emitted.
Answer
An atomic orbital describes an allowed distribution in space, about the nucleus where
there is a high probability of finding an electron
But how are electrons arranged within each subshell; how many electrons will each orbital
contain?
Consider the formula for the sub-shell electron capacities, which is 2(2l + 1), l being the
orbital quantum number.
The factor (2l + 1) tells you the number of atomic orbitals in the sub-shell.
How many atomic orbitals are there in an s sub-shell, and how many in a p subshell?
Answer
For an s sub-shell l=0, so (2l + 1) = 1. An s sub-shell contains one orbital.For a p sub-
shell l=1, so (2l + 1) = 3. A p sub-shell contains three orbitals.
So looking at the atom as a whole, the lowest energy level (n=1) contains one s-orbital
only. However, moving to the next highest shell (n=2) you will find one s-orbital (the 2s)
and a set of three 2p orbitals.
Answer
A 3s orbital, a set of three 3p orbitals and a set of five 3d orbitals.
Answer
As l =1 for a sub-shell, the factor (2l + 1) tells you that it contains three atomic orbitals.
Each of the three orbitals can accommodate up to two electrons with opposed spins.
So a p sub-shell can contain a maximum of 2 × 3 = 6 electrons.
The final piece of the jigsaw, when building up a picture of how electrons occupy the
energy levels of atoms is connected to a property of the electron called spin. You will be
looking at this in the next section.
Answer
As an s sub-shell contains one orbital, this means that it can contain up to two
electrons.
Two such electrons with opposed spins are said to be paired and are conveniently
represented in a so called box diagram.
Given a full atomic orbital can contain up to two electrons with opposing spins. This may
be simply represented by writing one electron as an upward-pointing half-headed arrow,
and the other as a downward pointing half-headed arrow.
And each orbital is drawn as a box into which these half-headed arrows are drawn.
For example, the helium atom has the electronic configuration 1s2. As the 1s sub-shell
contains just one orbital, this can be depicted by a single box containing the two electrons
(Figure 10).
Answer
1s22s22p3
The 1s and 2s sub-shells contain one orbital each, and the 2p sub-shell contains three.
The box diagram that must be filled therefore takes the form shown in Figure 11:
The oxygen atom has atomic number 8. Draw a box diagram for oxygen.
Answer
As there are four 2p electrons and only three 2p boxes, the fourth 2p electron cannot
have a spin parallel to the other three. It must go into a box that is already occupied by
one electron with opposite spin (Figure 13):
How does the reactivity with water vary on going from lithium to caesium?
Answer
The reaction becomes progressively more vigorous (and spectacular).
● 0.934% argon
● 0.0018% neon
● 0.00052% helium
● 0.00011% krypton
● 0.000009% xenon
The noble gases are all characterised by being extremely unreactive (in fact they are often
called the inert gases). This is illustrated in the following video clip.
2.2 Allotropes
Different solid forms of the same element are called allotropes (or polymorphs).
Carbon, sulfur and phosphorous are examples of elements that form a number of
allotropes.
Let’s focus on carbon.
Diamond is an allotrope of carbon. The arrangement of its atoms is shown in Figure 15;
for each atom are four surrounding carbon atoms at the corners of a regular tetrahedron,
and the C—C distance is 154 pm.
Figure 15 The structure of diamond. Note here distances are reported in picometeres
(pm), where 1pm ≡ 10-12m
Figure 16 shows the structure of graphite, the form of carbon used in pencil leads. In this
allotrope, there are regular hexagons of carbon atoms arranged in parallel sheets. Within
the sheets, the C—C distance is only 142 pm, but the shortest distances between the
sheets is 340 pm.
In 1985 Robert Curl, Harry Kroto and Richard Smalley discovered a further form of
carbon. This is known as buckminsterfullerene and its structure is shown in Figure 17.
There are sixty carbons in its structure.
Answer
The atoms are arranged in pentagons and hexagons. In fact there are twelve
pentagons and twenty hexagons, and the structure resembles a football – hence the
frequently used term buckyball.
There is in fact a bigger family of fullerenes comprising cage-like molecules (such as C60)
and tube fullerenes called nanotubes.
In addition to carbon, other elements that exist as allotropes include, phosphorus, sulfur
and tin . At this point take a look at the following video which shows you the allotropes of
sulfur and how they can be interconverted.
11
Consider for example sodium Na. What is the electronic configuration of this atom?
Answer
1s2 2s2 2p6 3s1
In atoms it is the outer electrons, known as valence electrons which get involved in
bonding. The outermost shell is often referred to as the valence shell.
In the case of sodium the 3s electron is the valence electron.
The remaining electrons (those which don’t get involved in bonding) are known as core
electrons. In the case of sodium these are the 1s2 2s2 2p6 electrons.
Answer
Neon
So in fact for sodium, the core electrons correspond to the electronic configuration of the
preceding noble gas neon. This may be represented as [Ne] and the electronic
configuration of sodium may be simplified to [Ne] 3s1.
So now you have a sort of shorthand method of writing out electronic configurations.
Have a go at the following examples.
Using the shorthand notation described above, write the electronic configurations of
the following elements, carbon (6C), aluminium (13Al) and potassium (19K).
Answer
Carbon: [He] 2s2 2p2 , aluminium: [Ne] 3s2 3p1 , potassium: [Ar] 4s1
What is the similarity in terms of electronic structure, between sodium and potassium?
Answer
They both have a single electron in the valence shell, in an s-subshell.
In fact the answer to the above question applies to all the elements in the Group 1- all the
alkali metals have a single valence electron. However as you go down the group the
principle quantum number (n) of the outer shell increases. So you can write the general
valance electronic configuration as ns1.
Moving along to Group 2, the valence electrons are given by ns2. Starting from the top,
beryllium will be 2s2, magnesium will be 3s2, calcium will be 4s2 and so on.
What is the valence electronic configuration of oxygen, phosphorus and bromine?
Oxygen: 2s2 2p4 phosphorus 3s2 3p3 bromine: 4s2 4p5
So to reiterate the key point; it is the valence electrons that are involved in bond formation
during chemical reactions, and you will look at the nature of chemical bonding in electronic
terms later in the course. But before this, in the next session you will be looking at the way
atoms combine to form molecules and the huge richness and variety of chemical
compounds.
Summary of session 1
1. All matter is made up of tiny particles called atoms which are composed of a central
positively charged nucleus surrounded by negatively charged electrons.
2. The nucleus comprises positively charged protons and neutrons carrying no charge.
The masses of protons and neutrons are the same, but the mass of electrons is
negligible in comparison. The number of protons must equal the number of electrons,
where there is an imbalance the species are referred to as ions.
3. The number of protons in the nucleus is the atomic number of an atom, and a
substance made up of atoms of the same atomic number is an element.
4. Atoms of the same element that differ only in the number of neutrons they contain are
known as isotopes. They have different atomic masses to other isotopes of the same
element.
5. Electrons are not located in a precise orbits around the nucleus, rather in regions of
space where there is a high probability of finding them – these are atomic orbitals.
6. Electrons in atoms are labelled by a unique set of quantum numbers.
7. The arrangement of electrons in the atomic orbitals of an atom is known as its
electronic configuration. The outermost electrons which are involved in chemical
bonding are known as valence electrons. The remainder are the core electrons.
8. In the periodic table, elements are arranged into horizontal rows called periods and
vertical columns called groups. Patterns in the chemical and physical properties of
the elements is revealed by the appearance of similar elements in the same Group.
9. Different solid forms of the same element are known as allotropes.
Session 2: Chemical
compounds
1 From elements to compounds
Atoms of different elements can combine in a seemingly infinite variety of ways to form
chemical compounds. Each one can be represented by a formula that shows how many
atoms of each element there are in the compound.
Some examples of compounds and their constituent elements are given in Table 1.
For some of the examples in this table, you may be thinking (not unreasonably) that the
link between the compound and what elements it is made from is not clear.
A fair point.
However the structure and origin of the names and formulas of compounds will be the
focus of this session’s study, which together with an introduction to chemical bonding and
the useful concept of valency, should go a long way to addressing this point, and giving
you a fundamental understanding of the nature of chemical compounds in general.
■ In session 1, you met charged versions of atoms; what are they called?
� These are ions (positively charged ions are called cations and negatively charged
ions are called anions).
■ Look again at the formula for magnesium chloride; what is the charge on the
magnesium cation?
� In MgCl2, because you have two Cl- ions per magnesium ion, the cation must be Mg2
+
to ensure the compound is electrically neutral.
So far in this introduction to chemical compounds you have met examples of substances
made up of ions.
But this isn’t always the case.
Instead substances may be made of molecules – this is the topic of the next section.
198pm separating the chlorine atoms in the actual Cl2 molecules, and is illustrated in
Figure 1(a), where the green/grey spheres represents chlorine atoms.
In other words the distance between the atoms in the chlorine molecule is small compared
with the average distance between the molecules in a jar of chlorine gas. This disparity is
less extreme, but still evident in liquid bromine and solid iodine, which are in the same
group of the periodic table as chlorine.
Suggest why Cl2, Br2, I2and CO2 are referred to as molecular substances?
Answer
They have structures which allow discrete molecules to be picked out.
■ Describe the reaction of aluminium with bromine – state your observations in a single
sentence.
� In amongst your observations you will most probably have noted that aluminium (a
solid) was mixed with liquid bromine. There was a short interval before the reaction
got going, but when it did it was pretty spectacular (flames and smoke were
produced). It’s perhaps worth adding here, that not all chemical reactions are quite so
dramatic!
The product of this reaction is a white solid called aluminium bromide, which consists of
three bromine atoms for every aluminium atom.
Actually this is an unfair question, because if you examine the crystal structure of solid
aluminium bromide you’ll find it is actually made up of Al2Br6 molecules (Figure 3). The
two aluminium atoms, and four of the bromine atoms at the ends of the molecule, lie in the
same plane (at right-angles to the plane of the paper). The two bromines that bridge the
aluminium’s lie above and below this plane.
But, note the ratio of Al to Br is still 1:3.
■ Do these molecules have the same empirical formula as the solid in which they are
found?
� Yes; the molecular formula is Al2Br6 but in both the molecules and the solid, the ratio
of aluminium atoms to bromine atoms is 1:3.
As is the case here the empirical formula need not necessarily be the same as the
molecular formula, the latter shows the actual number of atoms in one molecule of a
compound.
Don’t worry about the names used for organic compounds either here or elsewhere in this
course. Where such compounds are discussed, you will only be looking at differences in
the structure of their molecules; just view the names as labels.
Let’s now return to where we started and look in a bit more detail at compounds that can
be described as non-molecular.
But how are these ions arranged to form a crystal of sodium chloride?
This is built up from tiny cubes shown in Figure 5 consisting of sodium cations (Na+) and
chloride anions (Cl-)
Figure 5 (a) Structure of common salt or sodium chloride; (b) a regular octahedron whose
corners represent the positions of the chloride anions around each sodium cation
Look first at the sodium at the centre of the cube. The six chloride anions lie at the corners
of a regular octahedron Figure 5(b).
The formula NaCl is an empirical formula; so it is telling you that in sodium chloride there
are equal numbers of sodiums and chlorines. This condition is automatically fulfilled by
joining many of the cubes shown in Figure 5(a) through their faces.
But, Figure 5 provides no evidence that NaCl is the molecular formula of sodium chloride.
In fact quite the opposite.
■ What atoms, and how many atoms surround each silicon atom in SiO2?
� Silicon is surrounded by four oxygen atoms.
A better description would be to say; each silicon atom sits at the centre of a tetrahedron
of oxygen atoms: and as shown in Figure 6 they are all at the same distance (162pm).
There is no evidence of discrete SiO2 molecules.
Figure 6 The structure of silica, SiO2, in the form of quartz. One SiO4 tetrahedron is
highlighted in green
Figure 7 The environment of each atom in (a) the diamond form of the element carbon; (b)
aluminium
■ Looking at diamond (Figure 7a), describe the environment around each carbon atom.
� There are four surrounding carbon atoms at the corners of a tetrahedron, and as
shown in the figure the C-C distance is 154pm.
In aluminium (Figure 7b) each atom has twelve surrounding aluminium atoms, and the Al-
Al distance is 286pm.
The key point is, there is no justification for dividing the structure up into molecules
containing two or more atoms. The individual units shown here extend throughout a
crystal of the substance, and its formula will vary with crystal size.
For this reason the term extended structure is used to describe non-molecular
substances of this type.
In Figure 7 (a and b), the extension is in three dimensions, but it may sometimes occur in
one or two.
Sticking with carbon, let’s look again at one of its other allotropes – graphite (Figure 8).
So graphite is an extended structure, but this time the extension is in two dimensions.
Although not considered here substances do exist which may be described as one
dimensional structures.
atoms together are strong. But, the longer distance between different pairs (molecules)
tells us that the forces acting between one I2 molecule and another are much weaker.
Now, iodine melts at only 114oC, and boils at 185oC.
This also explains another property of iodine: it dissolves fairly easily in an organic solvent
like petrol. This is telling you the solid crystal falls apart and individual I2 molecules drift off
into solution.
As organic compounds are molecular, they too, often dissolve in petrol. For example
organic polymers you meet in everyday life although having unusually large molecules,
being molecular this could cause problems! An example is illustrated in Figure 9.
Figure 9. From the Daily Telegraph, 6 April 2001 (note the erroneous use of ‘melt’ for
‘dissolve’ in this extract)
By contrast, in salt, silica or aluminium (all non-molecular), the bonding is more evenly
distributed through the crystal, and there are no points of weakness where discrete
molecules can be prised apart.
So the melting and boiling temperatures of non-molecular substances tend to be greater
than those of molecular ones. Salt, silica and aluminium, for example, melt at 801oC,
1713oC and 660oC, respectively.
■ Why is the central oxygen atom larger than the hydrogen atoms?
� Hydrogen has just one electron whereas oxygen has eight, so the space occupied by
the electrons in oxygen, and hence the size of the atom is much larger.
The second view (Figure 10 b) is called a ball-and-stick model. It is perhaps less ‘realistic’
but has the major advantage that the relative positions of the centres of the atoms in the
water molecule can be seen more easily. It also represents the geometry of the molecule.
The angle between the three atoms in the water molecule is about 104o. This is called the
bond angle.
Figure 10 (a) Space-filling model of a water molecule. (b) Ball-and-stick model of a water
molecule
So in the formula (H2O), the atoms of the molecule are represented by their chemical
symbols: H for hydrogen and O for oxygen. As you saw earlier, the subscript 2 indicates
that there are two hydrogen atoms in the formula. So a subscript applies to whatever
element comes immediately before the subscript. And where there is no subscript shown
there is assumed to be a subscript 1. So in the formula H2O for water, two hydrogen
atoms and one oxygen atom are represented.
Formulas don’t have to include subscripts, for example carbon monoxide CO where there
is simply one carbon atom bonded to one oxygen atom.
A more complex formula is that of calcium nitrate, Ca(NO3)2 . This is an ionic solid and the
components are Ca2+ and NO3-.
Breaking the formula down – ignoring the charges for the moment.
There is no subscript following Ca, so the assumption is that there is just one calcium
represented in the formula.
However the unit ‘(NO3)2’, needs a little unravelling.
There are three oxygen atoms and one nitrogen atom N (no written subscript so assumed
to be 1) in the NO3 unit.
The subscript 2 indicates there are two of everything that comes before it. In other words
what’s inside the brackets is doubled up – there are two (NO3) units for every calcium.
To summarise, the formula represents one calcium atom, two nitrogen atoms and six
oxygen atoms. The reason for writing Ca(NO3 )2 rather than CaN2O6 is that, in the
compound calcium nitrate, each one of the two nitrogen atoms is attached to three oxygen
atoms.
Thus the chemical formula can convey some structural information too.
■ In terms of the ions involved, can you suggest why the contents of the brackets are
multiplied by 2?
� Calcium nitrate itself (has to be) un-charged, and looking at its components, the
calcium cations have a charge of +2 and the nitrate group has a charge of -1, so you
need two of the latter for every calcium cation to satisfy this condition.
Now you have a feel for what formulas represent, let’s now have a look at why compounds
have specific formulas.
Carbon forms many compounds with hydrogen and their formulas are consistent with
carbon having four ‘hooks’.
Here the number of valence electrons corresponds directly to the number of hooks, the
link is not always so simple, as you will see.
The simplest compound of carbon and hydrogen is the gas methane, CH4: a formula that
would be obtained if it were assumed that carbon had four ‘hooks’ and hydrogen had one.
Similarly the chlorine atom also has one ‘hook’, so the prediction for the formula of the
compound from carbon and chlorine is CCl4.
This tendency for atoms to behave as though they have a specific number of ‘hooks’ is
known as valency, and is sometimes referred to as the combining power of an atom (or a
group of atoms).
The usual valency values of some elements are shown in Table 2. You should note the
pattern here compares with the layout of the periodic table.
Similarly, when magnesium cations, Mg2+, combine with chloride anions, Cl −, there must
be twice as many chloride anions as magnesium cations in order for the charges to
balance each other. The chemical formula of magnesium chloride is MgCl2.
■ Using Table 2 predict the ions that will be formed from the following atoms: K, Ca, Al,
S, F and Br.
� K+, Ca2+, Al3+, S2-, F- and Br-
■ Give the formulas of the compounds that will be formed when calcium forms an ionic
compound with fluorine..
� Calcium has a valency of 2, so you are dealing with Ca2+ cations. Fluorine has a
valency of 1, so forms F- anions, thus an electrically neutral ionic compound will be
CaF2.
■ In the case of oxygen you have O2- anions, what is the formula of the oxide it will form
with aluminium?
� This is a bit more involved. Remember you need to form an electrically neutral
compound.So given you have Al3+ ions, you have to multiply Al by two and O by
three. The formula will be Al2O3.
Table 3 gives the formulas and charges on some other ionic groups.
■ Give the formulas of the ionic compounds that comprise the following pairs of ions:
�
i. NaOH
ii. KNO3, note here, as there is only one nitrate group, the brackets around the
NO3 unit tend to be left out.
iii. NH4NO3, as above, this could reasonably be written (NH4)(NO3), but again as
these ionic groups combine in a 1:1 ratio the brackets are omitted.
!Warning! not supportedSo far you have seen how valency may be used to rationalise the
formulas of compounds, but as was alluded to above to really get to grips with how (and
why) compounds form you need to consider the electrons on atoms that get involved in
bonding. This is the focus of the next session.
Summary of session 2
● Chemical compounds are combinations of the atoms of two or more chemical
elements. The empirical formula of a compound tells us the ratio in which the atoms
of its elements are combined.
● Molecular substances have structures from which discrete molecules can be picked
out by using interatomic distance as a criterion; non-molecular substances do not.
The formula of these discrete molecules is called the molecular formula. Most
molecular compounds contain just one type of molecule, which then has the same
empirical formula as the compound. Most organic compounds are molecular
substances.
● Molecular substances usually have lower melting and boiling temperatures than non-
molecular ones. They also tend to dissolve more easily in organic solvents such as
petrol.
● The valency of an atom can be described as the number of ‘hooks’ each atom has
which it can use to attach to other atoms.
● In ionic compounds valency gives an indication of the charge on cations and anions
(or ionic groups).
Learning Outcomes
After studying Session 3 you should be able to:
● understand the common themes running through ionic, covalent and metallic
descriptions of chemical bonding
● understand how the concept of electronegativity and its variation over the periodic
table can be used to rationalise the nature of the bonding in substances
● appreciate how chemical substances can be described (and classified) in terms of
structure and bond type.
These ideas were the brainchild of American chemist G.N. Lewis and will be considered in
the next section.
■ Are the following compounds molecular or non-molecular? Chlorine (Cl2) and sodium
chloride (NaCl).
�
Chlorine (Cl2) is a molecular compound – it is made up of discrete Cl2
molecules.
Sodium chloride (NaCl) a non-molecular compound, is made up of Na+ and Cl-
ions.
Starting with Cl2, how do two chlorine atoms form a bond to make a chlorine molecule?
You will look at simple bonding theory applied to chlorine in the next section.
Because chlorine has an electronic configuration 1s2 2s2 2p6 3s2 3p5, all it needs is a
single electron to give it 8 electrons in its outer shell, and thus the electronic configuration
of argon.
Sodium has the electronic configuration, 1s2 2s2 2p6 3s1 (or [Ne] 3s1) so it has one
valence electron. It can acquire a filled outer shell by transferring its outer electron to the
chlorine atoms.
And you know, adding one electron to a chlorine atom will give it a noble gas
configuration.
■ How will the charges on sodium and chlorine be changed by this transfer of an
electron?
� Remember electrons are negatively charged, so if sodium is losing an electron it
must become a positively charged ion – it forms a cation. Likewise when chlorine
gains an electron it will become negatively charged – an anion.
So the transfer of the electron to chlorine in NaCl produces ions, each of which can exist
independently of any one partner. As they are oppositely charged there will be an
attraction between them – this attraction is the ionic bond.
In sodium chloride, each ion is surrounded by as many ions of opposite charge as space
allows. In this case the number is six (Figure 1).
Figure 1 An ionic picture of solid sodium chloride – an assembly of Na+ and Cl- ions
It is worth making the point here that although this is the way ionic bonding is usually
taught, and has stood the test of time, it is rather an unrealistic situation in practice, rather
is a convenient ‘thought experiment’.
Yes – you can pass chlorine gas over sodium and a reaction will take place to form sodium
chloride. But generally speaking you don’t get sodium atoms and chlorine atoms
interacting together and electron transfer occurring as described above. A much more
likely process is for ionic compounds form from solutions in water in which the ions are
already present and crystallise out of solution when water is evaporated.
However – this apart – the basic definition of the ionic bond still stands – that is the
electrostatic attraction between cations and anions.
of properties
Consider a crystal of sodium chloride.
As a consequence of the strong attractive forces existing between the closely packed ions
of opposite charge, the sodium chloride structure is not easily broken down: it has a high
melting temperature and does not dissolve in organic solvents like the liquid hydrocarbons
found in petrol. When it does melt, or dissolve in water, the ions separate and the resulting
ionic fluid conducts electricity.
Figure 2 shows a simple experimental set-up to show molten sodium chloride (or indeed a
solution of sodium chloride in water) conducts electricity. A battery is connected to two
metal rods. The electrode attached to the negative terminal of the power source is called
the cathode, and the anode is the electrode connected to the positive terminal.
Figure 3(a) below shows the Lewis structure for the Cl2 molecule. The valence electrons
are grouped in pairs, to reflect the pairing of electrons you’ve previously seen for atomic
orbitals.
Figure 3 Lewis structures for (a) Cl2 and (b) the ions in solid NaCl
The shared pair is shown as a dot and a cross in the centre. The remaining electrons in
the valance shell of each atom are distributed in pairs, so taking the shared electrons into
account there are eight electrons around each chlorine atom in the molecule. Note that
the use of a dot or a cross is just to indicate where a particular electron originates, they are
purely symbols. There’s no difference between an electron represented by a cross and
one allocated a dot.
Likewise the ions in sodium chloride have also been represented in this way in
Figure 3(b).
The chloride anion has eight outer electrons; recall the chlorine atom has gained an
electron to complete its octet. Similarly sodium loses its outer electron to form a cation, so
the Lewis structure of the cation has no electrons shown.
In both structures, the formation of a chemical bond involves the production of a new
electron pair in the outer shell of chlorine. However, in Cl2, because the two atoms are
identical, the electron pair must be equally shared between the two atoms. In contrast you
can view the electron pair as being located on the chloride anion in NaCl.
You will return to this point later, but first a look at a molecule which does not follow the
octet rule.
The link between ionic and covalent bonding is highlighted with reference to the concept
of electronegativity, you will be looking at this in the next section.
3 Electronegativity
The electronegativity of an element is a measure of the power of its atoms to attract
electrons when forming chemical bonds.
The greater the power to attract electrons, the greater the electronegativity.
Let’s look at how this idea applies to chlorine and sodium chloride.
In the Cl2 molecule the two identical atoms have an equal ‘appetite’ for electrons: their
electronegativities are equal, so the electron pair is shared equally between them.
But this clearly can’t be the case for sodium chloride.
In fact in sodium chloride, the electron pair has been completely taken over by chlorine,
which forms a chloride ion.
■ Account for the variation in electronegativity shown in Figure 4. (Hint: think back to
what you know about the structure of atoms).
� Across a period of the periodic table, the atomic number, or positive charge on the
nucleus, increases. This increases the attraction of the outer electrons to the
nucleus, so the electronegativity of the elements also increases.
The principle quantum number of the outer electrons decreases from the bottom to the top
of the group. This means that they get closer to the positively charged nucleus. The result
is, again, that the outer electrons are attracted more strongly, and the electronegativity
increases.
■ Suggest why the noble gases have been omitted from Figure 4
� These are completely unreactive, in fact at normal temperatures helium, neon and
argon form no compounds; hence electronegativities are not assigned to them.
So taking everything into account, top of the league table for electronegativity is fluorine,
followed by oxygen and chlorine. The three most electronegative elements are shown on
a green background in Figure 4.
But how does electronegativity impact on bonding?
This will be considered in the next section.
Because of this large difference in electronegativity, the electron pair (x●) spends all of its
time on chlorine, the charges on sodium and chlorine are +1 and -1 respectively, and NaCl
is ionic.
In Cl2, by contrast, the electronegativity difference between the bound elements is zero;
the shared electrons spend equal times on each chlorine atom, both chlorines are
uncharged, the substance is molecular and held together by covalent bonding.
Covalently bonded molecular substances such as Cl2, I2 and CO2 are combinations from
the right of Figure 4, because, although for these elements the individual electro-
negativities are large, the electronegativity differences between them are small.
These two cases deal with combinations of elements with very different electronegativities
from the left and right of Figure 4 (ionic bonding), and with combinations of elements of
high but similar electronegativity from the right (covalent bonding). And throughout the
discussion so far it has been implied that compounds are either ionic or covalent – but this
is not necessarily the case.
If you consider the water molecule (H2O), this consists of two H-O bonds, these may be
described as covalent with both atoms contributing one electron to the bond. However,
because oxygen is more electronegative than hydrogen, the two electrons in the bond are
more likely to be found closer to the oxygen. This unequal distribution of electrons results
in what is known as a polar covalent bond; the bonding electrons are skewed towards the
oxygen and as a result, in water, oxygen will have a partial negative charge (often
represented as !Warning! Symbol not supporteddδ-), and hydrogen a partial positive
charge (dδ+).
Taking the water molecule as a whole, and noting it has V shape (for reasons which will
become clear later in this course), the polar nature of water may be represented by
Figure 5.
■ If a plastic pen is rubbed vigorously with a woollen cloth, and held next to a slow,
steady stream of water the water is deflected towards it (Figure 6). Suggest why.
● The pen becomes electrostatically charged on rubbing, and attracts the oppositely
charged end of the water molecules.
4 Bonding in metals
Elements on the far left of the periodic table combine together in a different way to what
you’ve seen so far. They are metals and their bonding is somewhat different.
Two familiar properties of metals make for a good starting point for developing a model of
bonding in metals.
i. Metals have a strong tendency to form positive ions. Thus, when sodium reacts with
water, and when magnesium and aluminium react with acids, hydrogen gas is
evolved and the ions Na+, Mg2+ and Al3+, respectively, are formed.
ii. Metals are good conductors of electricity: when a voltage difference is applied across
two points on a piece of metal, there is a movement of electrons between the two
points, and an electric current flows.
The key feature of the bonding in sodium and indeed metals in general is the fact that the
electrons so removed are no longer tied to individual metal ions, and are allowed to move
freely throughout the entire volume of the metallic substance.
The low electronegativities mean that none of the atoms present will readily take on these
electrons, either by forming a negative ion, or by accepting a share in electron-pair bonds.
Consequently, a pool of free electrons is created which is like hot money: they are passed
quickly from hand to hand, and can find no permanent home!
These free electrons, sometimes described as an 'electron gas', are responsible for the
ability of metals to conduct electricity. At the same time, they occupy the space between
the positive ions, so their negative charge acts like a binding glue pulling the metal sites
together. The metallic bond is an attraction between these positive and negative
charges.
Figure 7 In the electron gas model of metallic bonding for metals and alloys, an array of
positive ions is steeped in a pool of negatively charged free electrons (indicated by the
■ What were your observations when sodium was added to liquid ammonia?
� Sodium dissolved to give a blue solution. The blue colour is thought to arise from
electrons surrounded by ammonia molecules. On increasing the concentration of
sodium a shiny bronze colour was oberved.
4.1 Alloys
To conclude this section on metals, one final point.
So far, consideration has only been given to cases where all the atoms are the same, and
a metallic element is the result. However, such metallic substances can be formed from
two or more elements, and they are then called alloys.
One of the earliest examples is bronze, an alloy of copper and tin.
Copper and tin are fairly soft metals, but from about 3000 BC a harder metal was
produced by heating mixed ores of copper and tin with charcoal, to form bronze. At the
atomic level, copper atoms are mixed with tin atoms, a situation which increases the
hardness of the material, and consequently bronze was widely used as blades in daggers,
the tips of spears or the heads of axes, where copper or tin alone would have been too
soft to use.
■ Consider the compounds IBr, CaCl2 and CaMg2. One is ionic, one is covalent, and
one is metallic. Identify which is which, and match each compound to one of the
descriptions below. In each case, suggest whether the compound is molecular or
non-molecular.
i. White solid that melts at 782°C. It is a poor conductor of electricity in the solid
state, but a good one when melted or dissolved in water.
ii. Brown-black solid that melts at 41°C to give a liquid with low electrical
conductivity.
iii. Silvery-looking solid that melts at 720°C. Whether solid or molten, it is an
excellent conductor of electricity.
So, up to this point you’ve met some elementary ideas about chemical bonding, you’ll be
developing these further in the next session and find out more about how the type of
bonding affects the properties of chemical substances, in other words a link between
what’s happening on the atomic and molecular scale and the world we can see.
Summary of session 3
1. The chemical formulae of many substances can be understood by arguing that their
atoms attain noble gas structures by chemical combination.
2. In ionic compounds, this is achieved by the transfer of electrons from one atom to
another; in molecular substances, it happens through the sharing of electron pairs in
covalent bonds. But in both cases, bonds between atoms consist of shared pairs of
electrons. In covalent compounds the sharing is fairly equitable; in ionic compounds
it is much less so.
3. In metals, the sharing takes a different form. An 'electron gas' is created by removing
electrons from the atoms of the metallic elements. The result is an array of ions
steeped in a pool of free electrons. The negatively charged electron gas occupies the
space between the ions and pulls them together.
Learning Outcomes
After studying Session 4 you should be able to:
● understand how the concept of valency can account for, and predict the formulas of
compounds
● sketch Lewis structures of molecules and ions
● identify situations where and appreciation of dative bonding is required to account for
the bonding in certain molecules and ions
● appreciate some molecules are not adequately represented by a single Lewis
structure and seem to be a composite of two or more resonance structures.
H2 and Cl2 are simply represented as a single line between the two atoms, both hydrogen
and chlorine have a valency of one.
Recalling that nitrogen has a valency three, and chlorine a valency of one; NCl3 is shown
with three bonds emerging from the nitrogen atom and one from each chlorine atom.
■ Account for the structure of methane CH4 (4.4) in terms of the valency of its atoms.
� Carbon has a valency of four, so will form four bonds to hydrogen, which has a
valency of one.
At this point, check that you are comfortable with these bonding ideas by attempting the
following.
■ Draw structural formulas for the following molecular substances: hydrogen chloride
(HCl), ammonia (NH3), water (H2O), oxygen (O2), carbon dioxide (CO2), ethane
(C2H4), hydrogen cyanide (HCN), ethyne (C2H2) and ethanal (CH3CHO).
� The structural formulae are as shown below:
So in order to achieve the shell structure of the nearest noble gas – neon, a nitrogen atom
must gain three electrons. Likewise hydrogen attains the shell structure of helium, with 2
outer electrons.
Therefore, if nitrogen shared three of its valence electrons with hydrogen atoms, it can
indeed acquire an octet in its valence shell. This is shown in structure 4.14.
Note that the electron pairs in these Lewis structures are of two types.
The pairs shared between atoms represent chemical bonds and are called bond pairs.
But there are also pairs that remain on just one atom and are unshared. These are called
non-bonded electron pairs or lone pairs.
■ How many bond pairs and non-bonded electron pairs are there in the ammonia
molecule?
� NH3 contains three bond pairs and one non-bonded pair.
■ Draw the Lewis structure for the water molecule (H2O). How many bond pairs and
non-bonded pairs are there?
� Oxygen has six electrons in its valence shell, and so it can acquire an octet by
sharing electrons with two hydrogen atoms, which in turn fills its valence shell, see
structure 4.15 resulting in two bond pairs and two non-bonded pairs.
Figure 1 Lewis structures (bottom) and structural formulas (top) for CO2 and N2
In carbon dioxide, the two electron pairs between each oxygen atom and the central
carbon atom represent each carbon-oxygen double bond.
Turning now to the Lewis structure of the nitrogen molecule, the three shared pairs in the
nitrogen molecule are equivalent to a triple bond.
As an aside, it is worth adding that nitrogen, N2, is chemically very unreactive, in fact
almost as inert as the noble gases. This stems from the great strength of this triple bond.
Indeed, gaseous nitrogen finds applications where inert atmospheres are required,
including manufacture of air-sensitive chemicals, and in the liquid form when extreme cold
is essential (Figure 2), such as the preservation of blood and semen, and rapid freezing of
food.
■ Oxygen gas and sulfur dichloride contain the molecules O2 and SCl2 respectively.
Draw a Lewis structure for each molecule. Which noble gas structure is achieved by
each atom in the molecules?
� With six outer electrons each, the two oxygen atoms in the O2 molecule must form a
double bond (two shared electron pairs, structure 4.16) with each other if each is to
attain a noble gas configuration. SCl2 contains single bonds (structure 4.17 ).
In these Lewis structures, oxygen attains the neon configuration, and sulfur and
chlorine the argon configuration. When drawing Lewis structures, shape is
unimportant; the important point is to show the correct number of bonds (shared
electron pairs) formed by each atom. As either form of structure 4.17 does the job,
both are acceptable.
■ What shell structure in the ammonium ion is adjusted in order to write a Lewis
structure?
� Nitrogen has a higher valency than hydrogen, so the single positive charge on the
ammonium ion requires the removal of one electron from the nitrogen atom shell
structure.
In fact it is remarkable how many molecules and ions can be represented by Lewis
structures in which each atom has a noble gas shell structure.
Nevertheless, many exceptions do exist and you will look at a few examples in the next
section.
■ In how many of these Lewis structures do all the atoms have noble gas shell
structures?
� In only one, namely PF3.
Looking first at BF3, you can see around the boron atom there are six electrons – it is two
electrons short of the shell structure of neon. In contrast there are five electron pairs
around the phosphorus atom in PF5, which is two more than the shell structure of argon.
Clearly things aren’t as neat and tidy as they first appeared.
■ Describe the appearance of the product of the reaction of NH3 and BF3.
� The product appears as a dense white smoke.
Now let’s try to explain this reaction using the Lewis structures of the reacting molecules.
As you have seen already, ammonia (NH3) comprises three electron pair bonds to
hydrogen atoms and one non-bonded pair being allocated to nitrogen (Structure 4.14).
And in the last section you also saw that the Lewis structure of boron trifluoride left the
boron atom two electrons short of a noble gas configuration Structure 4.21.
The Lewis structures of these two molecules are reproduced below.
A bond in which the electron pair is provided by just one of the bonded atoms, as is the
case here, is called a dative bond (or coordinate bond).
Note that, in order to focus attention on the bonding electrons, the non-bonded electron
pairs on the fluorine atoms have been omitted from Structure 4.26 - this is common
practice.
In order to differentiate dative bonds from the more familiar bonds in which each bound
atom contributes an electron to the electron pair, dative bonds are represented as arrows
running from the ‘donor’ atom (in this case nitrogen) to the 'receptor' atom (in this case
boron) (4.27).
■ A student was asked to sketch the Lewis structure for CO, and came up with
structure 4.28.
�
Suppose that in addition, a dative bond is formed by allowing one of the oxygen non-
bonded pairs to become shared between oxygen and carbon, then carbon can achieve a
filled shell configuration.
This is represented by structures 4.29 and 4.30.
There are now three shared electron pairs between carbon and oxygen, so this is an
example of a triple bond.
Note again the use of an arrow to denote the donation of a pair of electrons from oxygen
to carbon.
Dative bonds are also useful when writing Lewis structures for ions such as carbonate,
CO32−. Beginning in the usual way by adding the overall charge to the atom with highest
valency, namely carbon, this means adding two electrons to carbon, which gives the atom
eight electrons in its outer shell. Formation of one C=O double bond and two C→O dative
bonds then gives Lewis structure 4.31, which is equivalent to structural formula 4.32.
Before leaving dative bonds, consider now an alternative way you often see them
represented.
Suppose that atom A forms a dative bond with atom B by donating a non-bonded electron
pair to it, this is represented by A→B.
But consider atom A before the bond is formed.
■ If you were to remove one of the lone pair of electrons on atom A and put it on atom
B, what would be the result?
� You would end up with the separate ions [A•] +
and [B•]−.
Suppose you now form a conventional shared electron-pair bond from the odd electrons
on the two ions. The electrons are shared between the A and B sites in just the way as
before, but the bond would now be written as .
Thus, A→B and are equivalent ways of writing the dative bond between A and B, and both
are equally valid. The structures H3N→BF3 and CO can therefore also be written as H3
−F3 and respectively.
■ Transform Structure 4.32 for the carbonate ion into this new dative bond
representation.
� See Structure 4.33; each C→O bond is replaced by −, and as the carbon atom forms
two dative bonds, a charge of +2 must be added to the double negative charge on
carbon in Structure 4.32. This gives zero charge on carbon in the new version, but as
there is now a single negative charge on each of the two singly bonded oxygens, the
total charge on the ion is −2 as before.
2 Resonance Structures
Gaseous oxygen occurs as O2 molecules. But ultraviolet light or an electric discharge
converts some of the oxygen to ozone, this is a naturally occurring allotrope of oxygen
with the molecular formula O3.
For ozone, a Lewis structure can be written which gives each atom a noble gas shell
structure. This is shown in Figure 3 along with a corresponding structural formula.
Figure 3 The ozone molecule: (a) a Lewis structure, (b) and (c) show structural formulas
with alternative representations of the dative bond
■ Do the representations shown in Figure 3 suggest that the lengths of the two bonds in
the ozone molecule should be equal or unequal?
� Unequal; one is a double bond and the other a single dative bond. It would be
expected this difference would impact on their lengths.
But experimental measurement shows that both bonds have the same length (127.8 pm).
To account for this, you need to realise that the structures shown in Figure 3 have
counterparts in which the double and single bonds have simply been exchanged.
The real structure of the molecule with its equal bond lengths is a sort of average of the
two. In situations like this, where a molecule is not adequately represented by a single
Lewis structure and seems to be a composite of two or more, the competing structures
are written down and linked by a double-headed arrow.
The two structures are called resonance structures, and the real structure of ozone is
said to be a resonance hybrid of the two. This is shown in Figure 4.
■ In the nitrate ion, NO3-, all three nitrogen-oxygen bonds are of equal length. Is this
consistent with the Lewis representation of this molecule?
� No, this contains one double bond and two single bonds (Structure 4.34). The atom
of highest valency is nitrogen, so the single negative charge on the NO3− ion is
assigned to nitrogen, giving it a full outer shell. All atoms gain the shell structure of
neon if nitrogen forms one double bond and two single dative bonds to oxygen.
■ In the light of your answer to the previous question, account for the fact that in the
nitrate ion, NO3-, all three nitrogen-oxygen bonds are actually of equal length.
� The nitrate ion can be represented as a resonance hybrid (4.35)
To develop this discussion of resonance structures further, an example from the world or
organic chemistry will be considered in the next section.
This is precisely the case: all carbon—carbon bond lengths in benzene are 140 pm!
Number the carbon—carbon bonds in a benzene ring of Figure 5 clockwise from 1 – 6. All
bonds contain at least one pair of electrons. However, in one of the resonance structures,
bonds 1, 3 and 5 are double bonds, each containing a second electron pair; in the other
resonance structure, the double bonds and extra pair of electrons are found at bonds 2, 4
and 6.
The implication of Figure 5 is that in the resonance hybrid these three extra pairs of
electrons are not confined to, or localised within, just half of the bonds in the ring. Instead,
they are delocalised around the ring and equally shared within all six bonds.
If you take the Lewis structure of the oxygen molecule at face value, then it looks like all
the bonding electrons are arranged in pairs, and there is a double bond between the two
oxygen atoms. However, the following video suggests otherwise.
Note: the term paramagnetism won’t be discussed in detail here, suffice to say this is a
weak form of magnetism as opposed to the effect you experience in magnetic materials
made of iron, or rare-earth elements for example.
■ What were your observations of the behaviour of liquid oxygen in a magnetic field?
� Liquid oxygen was attracted to the poles of the magnet (in contrast to liquid nitrogen
which passed straight through).
Without going into details here, the implication of the above result is that the oxygen
molecule contains one or more unpaired electrons.
The Lewis structure indicates all electrons are paired, so clearly is not an adequate
representation of the bonding in O2.
So although they are very useful (in fact later in this course you will see how drawing a
Lewis structure is the basis for predicting the shape of molecules) and routinely used,
chemists often have to use more sophisticated theories to provide a more detailed and
refined picture of the bonding in molecules.
In the next session you will start to look at the principles underpinning reactions and the
reactivity of substances.
Summary of session 4
1. In Lewis structures, each covalent bond is represented by a shared electron pair.
Double bonds require two shared pairs; a triple bond requires three. These
allocations often leave some atoms with non-bonded electron pairs.
2. Generally this operation provides each atom with a noble gas shell structure,
especially if dative bonds in which both electrons are contributed by one atom are
introduced. But in some cases, such as PF5, it does not.
3. Sometimes the bond lengths in a molecule are such that it cannot be represented by
a single Lewis structure or structural formula. It is better described as a resonance
hybrid-an average or superposition of two or more structural formulae called
'resonance structures'.
You are now half way through the course. The Open University would really appreciate
your feedback and suggestions for future improvement in our optional
end-of-course survey, which you will also have an opportunity to complete at the end of
Week 8. Participation will be completely confidential and we will not pass on your details
to others.
Session 5: Chemical
reactions
Introduction
At the heart of chemistry is the chemical reaction, the transformation of one type of matter
into another – a chemical change.
The ancient alchemists were obsessed with the transformation of base metals into gold,
and the synthesis of an elixir of immortality. Today chemists carry out reactions, less
rooted in the realms of fantasy to produce useful substances such as new drugs,
electronic materials and fabrics.
So far in this course you have seen a number of examples of how chemists convert one
substance to another.
In this session you will be looking at several facets of reactions and reactivity, and meet
another example of the chemist’s language, the chemical equation. Finally, building on
what you already know about molecular structure you will look at how reactivity is
focussed at particular parts of molecules.
To set this topic in context a running theme will be the chemistry of what you might
consider to be the archetypal reactive chemicals – explosives.
Learning Outcomes
After studying Session 5 you should be able to:
● understand what is meant by a chemical reaction
● construct balanced chemical equations to represent reactions
● be aware that the reactivity of molecules is, generally speaking, focused at certain
parts of a molecule.
1 Chemical reactions
A chemical reaction produces some sort of change in a substance.
The substances you start out with are called reactants and the new substance or
substances formed following reaction, are called products.
For example, a classic demonstration you might have seen at school is burning
magnesium ribbon in air. The silvery strip of metal burns with an intense white flame to
leave you with a powdery white solid, this is magnesium oxide.
All very impressive, but the point to remember is the physical and chemical properties of
the product are very different from the material you started out with. For example, in
addition to the obvious change in appearance; magnesium metal conducts electricity,
magnesium oxide does not.
But what reaction is taking place?
The air in which the magnesium burns is a mixture of gases. (Table 1).
Nitrogen 78%
Oxygen 21%
Argon 0.9%
Carbon dioxide 0.03%
Other gases 0.003%
Water variable
However the component of air that reacts with magnesium, is oxygen (in fact to be
absolutely precise there will be some reaction with nitrogen too, but to keep things simple
we will ignore this).
If you were to carry this reaction out in a sealed container with exactly the right amount of
oxygen present to react with the amount of magnesium used, then there would be no
oxygen left over afterwards. In other words you would get complete conversion to
magnesium oxide.
In fact this is telling you what chemical reactions are all about.
Chemical reactions simply involve the rearrangement of atoms, in this case magnesium
atoms are combining with oxygen atoms, to form magnesium cations and oxide anions,
which form an ionic solid, magnesium oxide (note the link with your study of chemical
compounds in Session 2).
This means there is no change in the total mass from that present before reaction – this is
the Law of conservation of mass which is the cornerstone of any chemical reaction.
The mass of reactant(s) you start with must equal the mass of product(s) you end up with.
While reading a textbook of chemistry, I came upon the statement, nitric acid
acts upon copper, and I was determined to see what this meant. Having located
some nitric acid, I had only to learn what the words act upon meant. In the
interests of knowledge, I was even willing to sacrifice one of the few copper
cents then in my possession. I put one of them on the table, opened the bottle
marked “nitric acid”, poured some of the liquid on the copper, and I prepared to
make an observation. But what was this wonderful thing which I beheld? The
cent was already changed, and it was no small change either. A greenish-
yellow liquid formed and fumed over the cent on the table. The air became
coloured dark-red. How could I stop this? I tried by picking up the cent and
throwing it out of the window. I learned another fact: nitric acid acts on fingers.
The pain led to another unpremeditated experiment. I drew my hands across
my trousers and discovered nitric acid acts on trousers. This was the most
impressive experiment I have ever performed. I tell of it even now with interest.
It was a revelation to me. Plainly the only way to learn about such remarkable
kinds of action is to see the results, to experiment, to work in a laboratory.
Chemists represent reactions by writing equations, and for Ira Remsen’s reaction this is
as follows:
(5.1)
At first sight this may appear unintelligible, something akin to a foreign language, and that
is essentially what it is. A chemical equation is written in a different language from that
used for everyday communication. However the basic tools to enable you to unravel
equations such as these are covered in Section 2.
2 Chemical equations
Chemical equations are representations of chemical reactions.
At this point you do have some experience of the use of numbers and symbols to
represent elements and compounds (chemical formulas), chemical equations use these
as a starting point.
Let’s begin by writing an equation for a simple reaction, one which is crucial to our
everyday lives; the combustion of natural gas in air. Natural gas is almost pure methane
whose molecules are made up of carbon and hydrogen atoms (i.e. it is hydrocarbon). And,
methane burns in (reacts with) oxygen to yield the molecules carbon dioxide and water
along with the production of heat.
In writing a chemical equation to represent this process, the first step is to identify the
reactants and the products.
The reactants are written on the left and the products on the right to give, initially, a word
‘equation’:
Even this simple word equation carries a lot of useful information in a relatively concise
form, but you can go further. You know already that a formula reveals much more about a
particular substance than does a name.
The molecular formula of methane is CH4.
■ What does the formula CH4 tell you about the methane molecule?
� CH4 indicates that the methane molecule comprises one carbon atom and four
hydrogen atoms.
So the next step is to replace the names of the compounds in the equation with
appropriate formulas.
■ What other formulas do you need to write the equation for the combustion of
methane?
� You also need oxygen O2, and carbon dioxide CO2 and water H2O.
The word and can be replaced by the plus sign, +, and the reaction representation
becomes:
Even at this early stage of development of the equation, there is useful information about
the chemistry going on.
It is important to note that the relationship provides information about the overall reaction.
It does not say anything about how the reaction actually occurs, such as the way in which
bonds are broken and formed to give the final products. Essentially it provides a summary
of the reaction.
To represent two water molecules, the number 2 is placed immediately before the formula
for water. This number indicates there is two of everything that comes after the number.
So above there are two water molecules, i.e. two H2O units. Where a number is not shown
(such as in front of CH4), you should assume (as with formulas) that a number 1 is implied.
Now a final check on the numbers of atoms: on the left (before the go to), there are 4
hydrogen atoms, 4 oxygen atoms and 1 carbon atom.
On the right, there are 4 hydrogen atoms, 4 oxygen atoms and 1 carbon atom.
There is a balance in the numbers of atoms of each type on each side – which is as it
should be.
Finally, the words ‘go to’ can be replaced with an equals sign to give:
(5.2)
The equals sign indicates that the representation is a balanced chemical equation. This is
why the words go to were retained earlier because, at that point, the reaction
representation was not balanced. Note, instead of an equals sign you will often find an
arrow (à) used.
It’s also important to realise that you cannot balance equations by changing chemical
formulas. For example, methane molecules always contain one carbon atom and four
hydrogen atoms, CH4. It is only the relative numbers of formula units in the equation that
are changed in the balancing process.
An additional piece of information that is often included in chemical equations is an
indication of the physical states of the species.
Gas is represented by (g) coming immediately after the species, (l) represents liquid and
(s) solid. These are called state symbols. You’ll also frequently come across (aq) short for
aqueous – this is used to indicate species that are dissolved in water.
At 25 °C, methane, oxygen and carbon dioxide are gases and water is a liquid.
So following all these steps, you end up with the following balanced chemical equation:
(5.3)
■ If you watched the ‘trailer’ for this module, you will have seen a young chemist
combining hydrogen (H2) and oxygen (O2) to form water (with a bang!). Write a
balanced chemical equation for this reaction.
�
(5.3)
Next, a chemical equation to represent a reaction on which our very existence depends.
The reaction of the simple sugar glucose is vital to the generation of energy within the
body. Glucose has a complicated molecular structure but it can be represented by the
formula C6 H12O6.
■ The chemical equation for the reaction between glucose and oxygen to give carbon
dioxide and water is:
(5.4)
So, up to this point, you have seen how a balanced chemical equation can encompass a
lot of information about a reaction.
It not only identifies the reactants and products and their respective formulas but also
indicates the relative numbers of each reactant molecule and the relative numbers of each
product molecule. It also shows, in the example above, that carbon from the glucose
molecules ends up in carbon dioxide molecules, the hydrogen produces water and the
oxygen in the product molecules comes both from the glucose molecules and from
molecular oxygen.
Now for some more practice.
FeO + H2 go to Fe + H2O
Fe2O3+ H2 go to Fe + H2O
CH4+ Cl2 go to CH2Cl2+ HCl
� The balanced equations are as follows.
FeO + H2= Fe + H2O (5.5)
Fe2O3+ 3H2 = 2Fe + 3H2O (5.6)
N2+ 3H2= 2NH3 (5.7)
CH4+ 2Cl2= CH2Cl2+ 2HCl (5.8)
As promised in the introduction, in this part of the module you will be making a few
excursions into the word of explosive materials and looking at the chemical reactions
involved. Your starting point, in the next section is gunpowder.
‘By the flash and combustion of fires, and by the horror of sounds, wonders can
be wrought, and at any distance that we wish, so that a man can hardly protect
himself or endure it.’
5 Reactivity of molecules
Reactivity is not spread evenly over a molecule; it tends to be concentrated at particular
sites within its structure.
The consequences of this idea are particularly apparent in the chemistry of carbon and its
compounds (known as organic chemistry), and has proved so valuable that it receives
specific recognition through the concept of the functional group.
(Note that in the formulas in this equation all the bonds apart from the ones connecting the
functional groups to the rest of the molecule have been omitted; these are known as
condensed structural formulae.)
An example of a change in both the functional group and its adjacent atoms is the reaction
of hexan-1-ol with chromic acid, H2CrO4, which yields hexanoic acid:
Here, the —CH2OH fragment of the original molecule has been converted into —COOH.
So this molecule now has a different functional group. This is now the carboxylic acid
functional group.
■ What bond types are contained within the carboxylic acid functional group?
� Note, in addition to a single bond attaching it to the chain of five carbon atoms, there
is one carbon oxygen double bond, and a single bond to an –OH group.
Note that an arrow has been used, rather than an equals sign.
This type of equation allows you to concentrate attention on the way in which one
molecular fragment, in this case—CH2OH, is transformed into another, —COOH.
Organic chemists often write equations of this sort, the reagent that brings about the
change is written above the arrow.
■ Based on what you’ve seen so far, organic molecules can be divided into three parts
– what are these?
� (i) functional groups, (ii) the immediate environment of the functional group, and (iii)
the rest of the molecule.
To a first approximation, the functional group and its immediate environment would be
expected to respond to a reactant in exactly the same way whatever the rest of the
molecule is like.
Thus, if you write the many molecules containing an alcohol functional group as R—OH,
the general form of Reaction 5.12 becomes:
Likewise, if we write the many molecules that terminate in the unit —CH2OH as R—
CH2OH, then the general form of Reaction 5.13 becomes:
In principle therefore, Reactions 5.14 and 5.15 allow us to predict the response of many
very different molecules to thionyl chloride and chromic acid.
These reactions show how a mixture of concentrated nitric and sulfuric acid replaces all of
the —OH groups with —O—NO2 groups, leaving the rest of the molecules unchanged.
Thus reinforcing the point made earlier, that reactivity tends to be concentrated at specific
sites in a molecule.
Finally, consider cotton, whose fibres consist of the polymer cellulose – a polymer being a
very large molecule made up of many repeated building blocks.
Cellulose is made of glucose molecules linked via oxygen atoms to form long chains. Two
molecules joined this way are shown in brackets on the left hand side of Figure 3 and this
unit repeats many times. The linking together of these groupings into long chains is
indicated by n, the value of which varies, but may be as large as 2000.
Chemical reactions often occur in steps; in each step, groups of atoms attach themselves
to the molecule, undergo change, and then depart. Attractive points of attachment in a
molecule will therefore make a reaction more likely.
Such bonds cannot be formed by carbon and hydrogen atoms in hexan-1-ol, because all
their outer electrons are used to form strong C—H and C—C bonds. This, then, is one
reason why the —OH functional group in 5.1 is the most probable site for a reaction.
Another arises from the fact that functional groups often introduce electronegativity
differences into an organic system.
In phenol, on the left of Reaction 5.19, an —OH group is attached to a benzene ring. Here
if you react it with a mixture of concentrated nitric and sulfuric acid, in complete contrast to
the examples you looked at earlier, the —OH group is untouched, and hydrogen atoms at
three points on the benzene ring are replaced by the nitro group, —NO2.
The product is a yellow crystalline solid known as 2, 4, 6-trinitrophenol or picric acid,
whose explosive power exceeds that of TNT.
Clearly expectations about the nitration of —OH functional groups were worked up from
cases where the hydrocarbon skeleton is saturated; that is, all carbon valencies in the
skeleton are used to form single bonds to either hydrogen or other carbon atoms.
Evidently, the benzene ring, which is not saturated, enhances the reactivity of the
hydrogen atoms attached to it, and simultaneously diminishes that of the attached —OH
group. So the behaviour of a functional group can in actual fact be affected by its
immediate environment.
In the next session you will be developing some ideas around molecular shape you met
earlier, and finding out how the arrangement of atoms in three dimensions plays a key role
in understanding chemical reactions.
Summary of session 5
● In a chemical reaction, the total mass of the reactants equals the total mass of the
products.
● Balanced chemical equations are used to concisely represent chemical reactions.
● The structural formulas of organic molecules can be divided into the carbon-
hydrogen framework or skeleton, and the functional group(s). In the first
approximation, the functional groups are the sites where reaction occurs, the
framework remaining unreactive.
● The above approximation works best when the framework consists of saturated
carbon atoms.
Learning Outcomes
After studying Session 6 you should be able to:
● appreciate the link between molecular shape and chemical reactivity
● understand what steric effects are
● predict the shapes of simple molecules.
■ If you take bromomethane (Figure 2b) and successively replace each hydrogen atom
by a methyl group, CH3, what are the formulas of the resulting molecules?
� CH3CH2Br, (CH3)2CHBr and (CH3)3CBr.
Figure 3 The molecules (a) bromomethane, CH3Br; (b) bromoethane, CH3CH2Br; (c) 2-
So the molecules are of the general type, RBr, where R is the framework to which the
functional group is attached.
When such bromo compounds are treated with a solution of lithium iodide (LiI) in the
solvent propanone (acetone, Structure 6.1), they often undergo a reaction in which the
bromo group is replaced by an iodo group (equation 1)
■ Why is the R-Br bond polar? (Hint: think back to what you know about
electronegativity)
� Bromine is more electronegative than carbon, so the carbon atom in this bond carries
a partial positive charge, written δ+, and the bromine atom a partial negative charge,
written δ− (Structure 6.2).
Given the polarity of the bond, the negatively charged iodide ion will then tend to
approach, and become attached to, the positive carbon. As a carbon-iodine bond is
formed, the carbon-bromine bond breaks and a bromide ion is ejected. The reaction is
therefore a good illustration of an important point made in Session 5; electronegativity
differences often contribute to the reactivity of functional groups.
What is interesting however, is that in this case, the four bromo compounds react at very
different speeds.
■ Figure 3 gives the relative rates of reaction of the four bromo compounds with iodide,
what does this tell you?
� The rate of reaction decreases from left to right. For example, CH3Br reacts 221 000
times as quickly as (CH3)2CHBr, and the reaction of (CH3)3CBr is so slow that it
appears not to take place at all.
In order to find a reasonable explanation for this, take another look at the space-filling
depiction of these molecules in Figure 2.
The reaction involves an iodide ion approaching and attaching to the carbon atom that is
bound to the bromine atom.
Logically there must be room for this to happen.
There is most room for such an approach on the side of the carbon atom that is opposite
to the bulky bromine atom – in other words, according to the direction of view depicted in
Figure 3.
■ Why do you think the reaction with iodide should be easier for CH3Br than for (CH3)
3CBr?
� In CH3Br, the carbon atom is very exposed to the incoming iodide, because hydrogen
atoms are small. But if they are replaced by bulkier methyl groups, this exposure
diminishes, until at (CH3)3CBr the carbon atom attached to bromine lies at the bottom
of a small cavity created by the three surrounding methyl groups. The iodide cannot
reach this carbon atom, so effectively, no reaction occurs.
The “blocking” effect that an organic group produces by virtue of its bulk is described as
steric or steric hindrance. This chosen example is a crude one, but it illustrates an
important idea.
In the next section you will see how these same ideas can be extended to more complex
molecules.
Figure 4 A model for enzyme action: only one of the three molecules has the shape
required to fit the cavity on the enzyme surface; the other two are excluded
Figure 7 The shapes of some fluoride molecules: (a) BeF2; (b) BF3; (c) CF4; (d) PF5; (e)
SF6; (f) IF7 (Note the “flying wedge” notation is used here)
Beryllium difluoride (BeF2) is a glassy non-molecular solid at room temperature, but the
BeF2 molecule (Figure 7a) is obtained when the solid is vaporised by heating it to 1 200 °
C. It is linear; that is, the sequence of atoms F—Be—F lies on a straight line. The spatial
arrangement of the neighbouring atoms around a particular atom is said to be the
coordination of that atom.
At 25 °C, BF3, CF4, PF5, SF6 and IF7 are all gases containing molecules with the shapes
shown in Figure 7b-f.
In BF3, all four atoms lie in the same plane, the boron atom forming three B—F bonds to
three fluorine atoms at the corners of an equilateral triangle This arrangement of fluorines
around boron is called trigonal planar.
In CF4 there is tetrahedral coordination of the four fluorine atoms around carbon. This is
the situation which you have already met in the methane molecule.
The coordination in PF5, SF6 and IF7 is a little more complicated and perhaps best
described by starting with the horizontal planes containing the central atom of these
molecules.
In PF5, this plane contains three P—F bonds directed towards the corners of an
equilateral triangle as in BF3; in SF6, it contains the sulfur atom with four surrounding
fluorines at the corners of a square.
In all three cases, the coordination is then completed by two other bonds to fluorine at 90°
to those in the horizontal plane, one pointing up, and the other pointing down. These
arrangements in PF5, SF6 and IF7 are called trigonal bipyramidal, octahedral and
pentagonal bipyramidal, respectively.
In the octahedral molecule SF6, all the fluorine atoms are equivalent. From each of the
fluorine atoms, the “view of the rest of the molecule” looks the same. But in PF5 and IF7,
this is not so. There are two kinds of fluorine position: equatorial positions in the horizontal
plane, and axial positions at right-angles to it. In Figure 8, these two kinds of position are
labelled for the trigonal-bipyramidal arrangement in PF5.
As bonds comprise negatively charged electrons, and two negatively charged objects will
repel each other, logically you would expect bonds to repel each other.
As a result they adopt positions where they are as far apart in space as possible.
Consider now the molecule SF6 – sulfur hexafluoride, a potent ‘greenhouse gas’.
Looking simply at its forumula, you might expect SF6 would have the shape shown in
Structure 6.3. The sulfur atom has six S—F bonds directed towards the corners of a
regular hexagon, and all seven atoms are in the same plane. However experiment shows
this isn’t the case and the actual shape is the octahedral one shown in Figure 7e.
But, of course, you are aware of the nature of electrostatic repulsion so,
All the shapes shown in Figure 7 conform to this principle by enforcing a good separation
of the bonds in space. The principle looks even more reasonable if you recall that bonds
comprise pairs of electrons; the like charges of these electron pairs lead to an expectation
that one pair will repel another.
However, two very common molecules will soon dispel the notion that repulsion between
bonding pairs of electrons is the sole determinant of molecular shape. These are water,
H2O, and ammonia, NH3 and will be considered in the next section.
■ What would be the shapes of the H2O and NH3 molecules if they were dictated only
by bond-bond repulsions?
� The two O—H bonds of H2O and the three N—H bonds of NH3 would get as far apart
as possible: H2O would be linear like BeF2, and NH3 would be trigonal planar like BF3
(see Figure 7).
The observed (experimentally determined) shapes are shown in Structures 6.4 and 6.5.
H2O is V-shaped and NH3 is pyramidal. In both cases the inter-bond angle is much closer
to the tetrahedral angle of 109.5° than to the possible value of 180° and 120°,
respectively.
■ What is present in H2O and NH3 that might explain these differences?
� In H2O and NH3, the O and N, carry non-bonded electron pairs.
You have previously looked at the Lewis structures for these molecules, and noted that in
order to make up an octet of electrons around the central atoms you had ‘left over’ non-
bonded electrons.
Specifically, for H2O around the oxygen atom there are two bonding pairs of electrons and
two non-bonded pairs. And in NH3 there are three bonding pairs and one non-bonded
pair.
Thus, both central atoms are surrounded by four pairs of electrons, and if these four pairs
repel one another, they will be directed towards the corners of a tetrahedron like the four C
—F bonds of CF4 in Figure 7c. The resulting arrangements are shown in Figure 9, both
consistent with the idea that the four pairs of electrons around the central atoms try to get
as far apart as possible. The non-bonded pairs as well as the bonding pairs are involved
in this repulsion
Figure 9 The shapes of the H2O (left) and NH3 (right) molecules
Overall the prediction is for a V-shaped H2O and a pyramidal NH3 molecule, with inter-
bond angles close to the tetrahedral angle.
Summary of session 6
1. Molecules have a three-dimensional shape which plays a crucial role in the way it
reacts.
2. Bulky irregularities in the shape of a molecule around a reactive site can exclude a
potential reactant. Such effects are described as steric.
3. A sufficient refinement of the molecular shape in the region of the reactive site can
make that site specific to just one particular reactant. Many enzymes operate in
this way.
4. The shapes of simple molecules can be predicted by taking into account the
repulsions between electron pairs surrounding a central atom.
5. So far you have seen there is a link between the shapes of molecules and chemical
reactivity. Indeed this course concludes with a look in more detail at reactions in
general. However to carry out a reaction in the laboratory it is important to mix
reactants in the correct proportions, and this entails having some means of doing this
on the basis of the number of atoms or molecules of the substances reacting. You will
be exploring this requirement in more detail in the next session.
Learning Outcomes
After studying Session 7 you should be able to:
● appreciate how mass and volume are measured in the laboratory
● understand the concept of the mole and its link to chemical equations
● understand what is meant by a solution, and how concentration is measured.
1 Units of measurement
The international system of units (Le Système International d’Unites, abbreviated to SI)
was developed in France during the 18th century in an effort to create a unified and
rational system of weights and measures. The SI system was adopted as the world
standard in 1960.
Mass and volume (of liquids) are the quantities chemists most often work with and later in
this session you will look at how these are determined in the laboratory, but first a look at
their SI units.
■ Express 2 µl in litres.
� 2 µl = 2 × 10−6 l
Originally a ‘pound’ was the monetary value given to a pound mass of sterling silver (an
alloy of 92.5% silver and 7.5% copper), hence ‘pound sterling’.
In practice, the most commonly used units differ from each other by a factor of 1000. For
example, in Figure 1 you can see how the units of mass – tonne (t), kilogram (kg), gram
(g), milligram (mg) and microgram (µg) – differ from each other by a factor of 1000.
Figure 2 (a) A general-purpose (or top pan) balance; (b) an analytical balance; (c) a
microbalance
Simply looking at the external appearance of both main types reveals a very obvious
difference: the analytical balance has an enclosed weighing compartment, the general-
purpose balance does not. However, the operational difference lies in the accuracy you
require.
General-purpose balances read to two or three decimal places in grams, i.e. their zeroed
display will show 0.00 g or 0.000 g respectively. You may come across the terms two-
place or three-place used in this context.
However, an analytical balance is far more accurate and reads to four or five decimal
places. Microbalances that measure to six decimal places are also quite common
(Figure 2c).
■ What will be the zero reading on four-place and five-place analytical balances?
� The readings will be 0.0000 g and 0.00000 g respectively.
The correct choice of balance for the job you are required to carry out is essential.
For example, if you were asked to weigh a 5 g sample of a substance to ±0.01g then a
general-purpose balance measuring to two decimal places would be ideal. Alternatively, if
you were asked to weigh a sample to a much higher degree of accuracy, say 0.5 g of a
substance to 0.0001 g, you would need to use an analytical balance measuring to four
decimal places.
In addition, the humble Pasteur pipette (Figure 5) is probably one of the most commonly
used items in the laboratory. These are used for the transfer of liquids (often dropwise)
where accuracy is not required.
So having had a glimpse inside the laboratory, in the next section you will return to the
problem posed at the start of this session, how do chemists quantify amounts of atoms
and molecules?
■ Calculate the relative molecular mass of water, given the relative atomic masses of
hydrogen and oxygen are, 1.01 and 16.0 respectively.
� RMM (H2O) = [2 x RAM(H)] + RAM (O)]
= (2 x 1.01) + 16.0
= 18.02.
■ What is the relative formula mass of sodium chloride (NaCl), given the relative atomic
masses of sodium and chlorine are 23.0 and 35.5 respectively.
� RFM (NaCl)= (23.0 + 35.5) = 58.5.
■ What is the difference between a molar mass and the relative mass?
� The former has units, the latter does not.
Thus helium has a relative mass of 4 (no units), meaning the helium atom is, relatively
speaking, 4 times heavier than a hydrogen atom. Helium has a molar mass of 4 g mol-1,
meaning that each mole of helium atoms has a mass of 4 g.
The definition of molar mass leads to two simple mathematical equations which help in
performing calculations involving moles (they are in fact two forms of the same equation):
If you were asked to find the number of moles of water in 100 g, this is one way you might
go about it.
Choose which form of the equation you need to use.
As you want to find the number of moles, you should use equation 2:
−1
You have previously worked out the molar mass of H2O = 18.0 g mol , so putting the
numbers and units in the equation you get:
Number of moles of water = 100 g/18.0 g mol−1 = 5.56 mol
■ How many moles are there in 0.769 g of CaF2, given RAM (Ca) = 40.08 and RAM (F)
= 19.00?
�
RFM CaF2 = 40.08 + (19.00 x 2)
= 78.08
Molar Mass CaF2 = 78.08 g mol-1
Number of moles of CaF2
= 0.769/78.08
= 0.01 mol.
This is the molecular interpretation of the equation, but you could also view it somewhat
differently.
The equation can also represent a process in which one mole of methane molecules and
two moles of oxygen molecules react together to form one mole of carbon dioxide and two
moles of water.
This is a molar interpretation of the equation.
Using the mole, it is possible to calculate quantities of reactants and products from a
chemical equation.
Methane is the major component of natural gas. The average house in the UK burns
about 1000 kg of methane each year. How much carbon dioxide enters the atmosphere
from this source?
The relative molecular mass of methane is 16.0 and that of carbon dioxide is 44.0.
So the mass of one mole of methane molecules is 16.0 g and the mass of one mole of
carbon dioxide molecules is 44.0 g.
One mole CH4 is converted to one mole CO2.
So 16.0 g CH4 are converted to 44.0 g CO2.
1.00 g CH4 is converted to 44.0/16.0 g CO2
And
1.00 kg CH4 is converted to 44.0/16.0 kg CO2
1000 kg CH4 is converted to 1000 × 44.0/16.0 kg CO2= 2.75 × 103 kg
So on average, each house adds 2750 kg of carbon dioxide to the atmosphere each year.
So have seen that using the concept of the mole in conjunction with balanced chemical
equations allows the masses of reactants and products to be calculated. However much
of the work carried out by chemists take place in solution, and as such there is a need to
be able to quantify how much of a particular substance is dissolved in a liquid – to this
end, being able to work in moles is crucial. This is the focus of the next section.
substance is defined as the maximum amount of solute that will dissolve in a given
amount of solvent.
For example, when common salt (sodium chloride, the solute) is dissolved in water (the
solvent) this gives a solution of sodium chloride. The solubility of a substance varies with
temperature and is usually expressed as the maximum amount of a substance that will
dissolve in 100 g of water at a particular temperature. However, it is often more usual (and
more useful) to express the amount of solute that is dissolved in a specific volume of
solution at a particular temperature.
This is known as the concentration of a solution, which is expressed as the amount of
solute in 1dm 3.
Thus, if 10.0 g of sodium chloride is dissolved in water to give 1 dm3 of solution, the
concentration would be 10.0 g per dm3 and so we would write 10.0 g dm−3.
One important point: it is essential to define concentration as the amount of solute in
exactly 1 dm 3, that is in 1 dm 3 of the final solution rather than the amount of solute
dissolved in 1 dm3 of water. If you did dissolve 10.0 g of sodium chloride in 1 dm3 of water
then the final volume would in effect be greater than 1 dm3. Therefore to make up a
solution with a particular concentration of a solute, the required amount of solute is firstly
dissolved fully in a suitable amount of water (less than 1 dm3) and then sufficient water is
added to achieve the correct final volume of 1 dm3 .
Note 1dm3 = 1 litre
This is a label from a bottle of mineral water. It shows the concentration of each of the
solutes expressed as mg/l.
So when sodium chloride dissolves in water, the resulting solution will contain equal
numbers of sodium and chloride ions:
Thus, if 1.0 mole of sodium chloride is dissolved in water to form 1 dm 3, giving a 1 mol dm
−3
solution, the solution will contain 1.0 mol dm−3 of Na+(aq) ions and 1.0 mol dm−3 Cl−(aq)
ions.
Next consider what would happen if you dissolved calcium chloride (CaCl2) in water.
The resulting solution has two chloride ions for every calcium ion. So if you have a 1 mol
dm−3 solution of calcium chloride, this means there is a concentration of 1 mol dm−3 of
Ca2+(aq) ions and 2 mol dm−3 of Cl −(aq) ions. In this example, you would multiply the
concentration by 2 for the chloride ions as there are twice as many.
Finally, having been introduced to the mole, and how it can be used to “count” atoms,
molecules and ions; in the next section you will see how you can take this concept and
answer a question posed at the very start of the course.
So using the Avogadro constant you arrive at an atomic size (2.6 x 10-10 m) in line with
what was given in Session 1, and if you want to visualise how small this number is; you
could set about 30 million gold atoms in a line across your fingernail!
Summary of session 7
1. The mole is used to quantify the number of atoms or formula units involved in a
reaction or contained in a volume of gas or solution.
2. The mole is the amount of substance containing the number of particles equal to
Avogadro’s constant, 6.02 x 1023.
3. To calculate quantities of reactants and products, it is essential to start with a
balanced chemical equation that is viewed from a molar rather than a molecular
perspective. The relative molecular mass values for the substances involved must be
calculated and, from this information, the masses of the substances involved in the
reaction can be determined.
4. Concentration is a measure of the amount of solute dissolved in a solution and is
measured in mol dm-3.
Session 8. Chemical
reactions and why they
happen
Introduction
So far, you have been largely concerned with atoms, molecules and their electronic and
spatial structures, you have not looked in much detail up to this point at chemical
reactions themselves and why they happen at all. This will be the topic of this session.
Rather than just discuss this in theoretical terms, to put some of the ideas you will be
presented with in context, you will concentrate on one particular reaction which occurs in
the modern motor car.
Learning Outcomes
After studying Session 8 you should be able to:
● appreciate the concept of chemical equilibrium and equilibrium constant
● recognise that at equilibrium the amounts of reactants and products are constant but
not necessarily the same
● appreciate that at equilibrium the rate of the forward reaction is the same as the rate
of the reverse reaction
● understand what is meant by rate of reaction and the influence of catalysts.
Looking at Table 1, the main concern stems from the release of carbon monoxide, CO,
and nitric oxide (strictly known as nitrogen monoxide), NO into the environment. Both are
very poisonous gases.
For example, when nitric oxide emerges from the exhaust into the open air and cools
down, it reacts with oxygen to form nitrogen dioxide, NO2. This causes respiratory
problems even at very low concentrations .You may recall (from Session 3) that NO2 is a
product of the reaction of copper with concentrated nitric acid (Figure 1).
Figure 1 Brown nitrogen dioxide gas being produced, in this case, by the reaction of
copper with concentrated nitric acid
However these dangers apart, there is a reaction that could be very beneficial:
2NO(g) + 2CO(g) = N2(g) + 2CO2(g) (1)
If NO and CO reacted like this, then the nitric oxide in the exhaust would disappear, and
take a substantial amount of poisonous carbon monoxide with it. Unfortunately, the
reaction does not seem to happen in practice. To understand why, you need to be
introduced to a concept fundamental to an appreciation of chemical reactions - chemical
equilibrium.
2 Chemical equilibrium
By and large chemical reactions do not go to completion, and they are reversible.
This means they take place in two ways; reactant(s) going to product(s), and product(s)
going to reactant(s). The forward and reverse reactions occur at the same time, and never
stop.
When the rate of the forward reaction is equal to the rate of the reverse reaction, the
reaction is said to have reached equilibrium.
In general, a chemical reaction that proceeds to equilibrium, can be represented by:
This possibility can be tested by examining the equilibrium constant, K, for the reaction.
The equilibrium constant, K, is obtained by dividing the result for the products by the result
for the reactants:
(1)
■ Given this information, does the equilibrium position lie to the left or right of
Equation (2)?
� K is immense, so at equilibrium, the concentrations of the products must be much
greater than those of the reactants (which appear on the bottom). The equilibrium
position for Reaction 7.2 at 525 °C therefore lies well over to the right.
Note: the units here are mol-1 litre for this equilibrium, mol is shorthand for moles, which
as you know is a measure of an amount of substance.
So up to this point, the issue of why the polluting gases NO and CO predominate hasn’t
been addressed, as the equilibrium is in fact favourable.
Another factor must be coming into play.
This is considered in the next section.
Figure 2 A simplified version of the change that takes place in the internal energy of the
molecules as nitric oxide and carbon monoxide change into nitrogen and carbon dioxide.
The upper (red) curve shows the change in the absence of a catalyst; the lower (blue)
curve, the change when a catalyst is present
Between the reactants and products, the internal energy does not decrease gradually as
the reaction progresses; instead, it rises initially, reaches a maximum, and then declines.
The upper curve shows the situation in the absence of a catalyst. The internal energy of
the reacting molecules must first increase by an amount marked 'energy barrier' in
Figure 2.
■ How might the reactants, NO and CO, acquire this additional energy?
� One possible source is the kinetic energy of other molecules. Lucky collisions may
provide some NO and CO molecules with unusually high energies. If these high-
energy molecules then chance to collide with each other, they might be able to
surmount the energy barrier and react together.
This also explains why an increase in temperature increases the rate of a reaction: a
temperature rise increases the speed of the molecules, and the required increase in
internal energy following collisions then becomes more probable.
But as we have seen, in this case the rate is not great even at 525 °C, the energy barrier
must be very high.
■ The main reason is a property of nitric oxide, looking at Reaction 1, can you suggest
what this might be?
� In Reaction 1, the nitrogen and oxygen atoms in NO must be separated at some
point, this involves breaking the bond between the two atoms, a reasonable thought
is that this bond is strong.
Indeed the bond that holds the nitrogen and oxygen atoms together is very strong – it is a
triple bond. A large input of energy is therefore needed to bring the separation about, so
the energy barrier is high and the reaction is slow.
The solution to the high energy barrier for Reaction 1 is to involve a third party – a catalyst.
What happens at the molecular level, and how the catalyst is considered, is covered in the
next section.
Figure 3 A three-way catalytic converter; the metal shell has been partially cut away,
exposing a gauze lining, inside which is the cylindrical grid of exhaust channels. A
separate grid of this type is shown above and to the left. It is black because the platinum-
rhodium catalyst has been dispersed over its surfaces. Before the catalyst is spread over
it, the ceramic grid is white, as shown above and to the right
The converter is called 'three way' because it removes all three main types of pollutant:
nitrogen oxides, carbon monoxide plus unburnt hydrocarbons.
3 Catalysts in action
Catalysts are widely used in the industrial manufacture of bulk commodity chemicals.
One example is in the preparation of nitric acid, a chemical which has many uses, but
most is combined with ammonia to produce ammonium nitrate a widely used fertilizer.
Nitric acid, HNO3, is made on a huge industrial scale by the Ostwald process in which
gaseous ammonia is converted first to NO and then to NO2 over a catalyst made from
platinum metal. This reaction, where combination with oxygen is occurring is known as
oxidation, and is demonstrated on the laboratory scale in the following video.
■ In the video, what evidence was there that a catalytic reaction (involving the spiral of
platinum metal) was occurring?
� The platinum wire was initially heated in a flame until red-hot. On lowering it into the
flask of ammonia (through which oxygen was bubbling) it continued to glow red
(accompanied by the occasional explosion!)
The NO2 is then dissolved in water to give a concentrated aqueous solution of the acid,
and the NO produced in this step is recycled back into earlier stages.
Now attempt the following question.
■ The combination of sulfur dioxide with oxygen, and the decomposition of steam into
hydrogen and oxygen are both reactions of great potential value. These reactions
and their equilibrium constants at 427oC (700K) are as follows.
The data show that K2 is tiny: at equilibrium, the concentrations of the hydrogen and
oxygen in the numerator (the top line of the fraction) are minute in comparison with
the concentration of steam in the denominator (the bottom line of the fraction). So in a
closed system at 700 K, significant amounts of hydrogen and oxygen will never be
formed from steam.
By contrast, K1 is large, so the equilibrium position at 700 K lies well over to the right
of the equation, and conversion of sulfur dioxide and oxygen to sulfur trioxide is
favourable. The fact that the reaction does not occur must be due to a slow rate of
reaction. We may therefore be able to obtain sulfur trioxide in this way if we can find a
suitable catalyst to speed up the reaction. A suitable catalyst is vanadium pentoxide,
V2O5, and at 700 K, this reaction is the key step in the manufacture of sulfuric acid
from sulfur, oxygen and water.
So there is a crucial distinction between the equilibrium constant and the rate and this
reveals itself in Figure 2.
The figure shows two different pathways by which the reactants can change into the
products, but both routes begin at the same reactant energy level, and finish at the same
product energy level. Regardless of reaction pathway, the energy difference between
reactants and products is the same.
It is an energy difference between reactants and products that determines the equilibrium
constant of a reaction, and therefore the equilibrium position. The fact that both pathways
have the same energy difference, and therefore the same equilibrium constant, shows
that the equilibrium constant in a reaction is not affected by how reactants change into
products. With equilibrium constants, the nature and energies of the initial and final states
are everything; what happens in between is immaterial.
When we turn to reaction rates, this is not so. In Figure 2, both routes start with the same
reactants, and end with the same products, but the intervening stages along each
pathway are very different. Such sequences of intervening stages are called reaction
mechanisms, and the mechanism in the presence of a catalyst delivers a smaller energy
barrier and a faster rate than the one that pertains when the catalyst is absent. With rates
of reaction, therefore, the mechanism is crucial.
Summary of session 8
1. The equilibrium constant of a reaction is fixed at any particular temperature. It
depends only on the natures of the initial reactants and the final products; what
happens as reactants change into products has no effect on the equilibrium constant
or position of equilibrium.
2. The rate of a chemical reaction is affected both by the temperature and by the
pathway (reaction mechanism) through which reactants change into products. This
pathway can sometimes be altered, for example by the introduction of a catalyst.
3. The catalyst causes a change in the reaction mechanism which leads to a lowering of
the energy barrier and to a greater rate of reaction.
Additional resources
You may be interested in exploring OpenLearn’s Elements of the periodic table
interactive. You’ll also find more science related content on the
Science, Maths & Technology pages.
Acknowledgements
This free course was written by Rob Janes.
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