Assignment 1 Biol 1700 Winter 2021 Final
Assignment 1 Biol 1700 Winter 2021 Final
Assignment 1 Biol 1700 Winter 2021 Final
ASSIGNMENT 1
Biology I, Pre-Health Sciences - Durham College, Winter 2021
/70 marks
EVALUATION NOTES
Rationale: In this section you are required to answer content specific questions. These questions are
very similar in structure and style to Test 1 questions and will therefore be excellent study practice.
Instructions:
Answer in the spaces provided.
Read the questions carefully and thoroughly.
Consider the point value of each question as a guide for how much detail you should include
Short answers should be written in IN YOUR OWN WORDS using COMPLETE SENTENCES
2. (2 marks) Define homeostasis IN YOUR OWN WORDS. List at least 2 descriptive points.
Point 1: Homeostasis is the bodies way of keeping itself at its ideal range. It is a
stable, internal balance, which can also be called “equilibrium”, which is
important to maintain because cells will only function properly when all
physiological aspects are in the correct range.
Point 2: All of the organ systems within the body are always working to achieve
this equilibrium within the body.
UNIT 3: Cells
A. Plasma membrane
B. Nucleus
C. Nucleolus
D. Ribosome
E. Rough endoplasmic reticulum
F. Smooth endoplasmic reticulum
G. Golgi apparatus
H. Lysosome
I. Cilia
J. Flagella
K. Mitochondria
L. Centriole/centrosome
6. (2 marks) Consider the statements below regarding protein production. Put the following in
chronological order by assigning each statement a number from 1-5.
a. ___5____ A transport vesicle delivers proteins to the plasma membrane for exocytosis
b. __2_____ The ribosome manufactures the protein
c. __4_____ The Golgi apparatus “packages” proteins with carbohydrates
8. (2 marks) List TWO differences between simple and solute pumping with respect to plasma
membrane transport. [TIP: Make sure to organize your answers in the chart so that the
differences align.]
9. (3 marks) Answer the questions in the chart regarding the 3 stages of cellular respiration.
Stage Question
Glycolysis Fill-in-the-blank: By the end of glycolysis, glucose has
been broken down into __2
pyruvate______________________.
Citric acid cycle / Krebs cycle How many ATP are produced during this stage?
________2________________
Electron transport chain Where does this process take place? Be as specific as
possible. __the inner membrane of the
mitochondrion.____
10. (3 marks) The daughter cells at the end of mitosis are different than the daughter cells at the end
of meiosis. List THREE ways in which the daughter cells are different using the chart below.
[TIP 1: Be sure to list differences that specifically describe the daughter cells, NOT other
general differences between meiosis and mitosis. TIP 2: Make sure to organize your answers in
the chart so that the differences align.]
Differences
Meiosis Mitosis
There are 4 daughter cells at the end There are 2 daughter cells at the end
of meiosis Vs of mitosis
The daughter cells are haploids The daughter cells are diploids
The daughter cells are unique, will The daughter cells are identical
not be identical copies
12. (4 marks) Describe what a human female karyotype would look like for a person with Edwards
Syndrome. Include at least FOUR points in your description. [Tip 1: If you’ve never heard of
Edwards syndrome, do quick Google search to see how the chromosomes are affected. Tip 2:
This question is asking you to describe the karyotype, NOT the symptoms of this disorder]
In a human female with Edwards syndrome, their karyotype would have the sex chromosomes of XX.
This karyotype would also show 3 copies of chromosome 18, as Edwards syndrome is a trisomy.
13. (1 mark) During which stage of the cell cycle are proteins made for cell division? Be as
specific as possible. __During interphase, at Gap 2.________
14. (4 marks) Compare and contrast the structure of DNA and RNA. List ONE similarity and
THREE differences. [TIP 1: Be sure to provide structural differences and NOT differences
related to location or function. TIP 2: Make sure to organize your answers in the chart so that
the differences align.]
Differences
DNA RNA
Similarities
The building block of both DNA and RNA is the nucleotide – which contains a
sugar, a phosphate and a base.
Scenario: Hiba is a student in the Pre-Health Sciences program at Durham College. She is enjoying
being back in the classroom after several years of working as a personal support worker in the Durham
region. While the demands of school are intense, Hiba knows that her hard work and dedication will
pay off as she pursues a career in nursing.
Several weeks into the term, Hiba notices that her 7-month-old daughter, Douaa – a baby with a
contagious smile and a voracious appetite for banana and sweet potato – appears out of sorts and seems
to have painful polyps in her nose accompanied by a small wheezing sound when she breathes. Hiba
also realizes that Douaa appears smaller than other children her age and doesn’t appear to have put on
much weight over the last month or two. Worried, she brings Douaa to her local emergency room at
Lakeridge Health.
In the emergency room a friendly doctor named Dr. Raghavan is able to see them. After her initial
assessment, Dr. Raghavan tells Hiba that the polyps and lack of growth rate could indicate something
more serious. She would like to draw some blood and run a few more tests including a chest X-ray
and a sweat test. During her analysis of the test results, Dr. Raghavan notes 2 key observations in her
charts, as follows:
Note 1 = Polyp is anterior, 1 mm superior to the left nostril and lateral to the
nasal septum
Note 2 = Fluid build-up in lungs
16. (1 mark) What body cavity are the lungs a part of?
Circle or highlight ALL that apply.
a. Ventral
b. Vertebral
c. Abdominal
d. Pelvic
e. Dorsal
f. Thoracic
g. Cranial
Scenario: Dr. Raghavan comes back several hours later with the results – the tests suggest that Douaa
has a genetic mutation in her DNA causing a disruption in a transport protein within the plasma
membrane called CFTR. CFTR functions to remove chloride ions from cells and without it, sticky
mucus can build up in places like the lungs. She carefully reveals that Douaa is suffering from a
disease called cystic fibrosis and that she needs to be admitted to begin immediate treatment.
Hiba’s mind immediately begins racing with questions. What causes cystic fibrosis? How is it
treated? How does a DNA mutation impact membrane transport? What does this mean for her
daughter’s future? She takes a deep breath, fights back tears, and gives Douaa a big hug. She then
calls her parents, arranges a babysitter for her other kids, and works to get Douaa admitted and settled
in her room. As Douaa falls asleep and the hospital staff change over to the night shift, Hiba rolls up
her sleeves, settles into a hospital chair, and begins to search for more answers on her phone.
17. (1 mark) Hiba begins with a quick Google search of “cystic fibrosis mutation.” First, she
noticed that the CFTR gene was actually discovered in 1989 by a team of researchers at The
Hospital for Sick Children in Toronto, Canada. A scientist named Lap-Chee Tsui was able to
map the gene to Chromosome 7. Second, she discovered that the gene can be mutated in many
ways, including the DNA sequence listed below. Based on your knowledge of mutations, circle
or highlight the specific DNA mutation(s) that could cause cystic fibrosis. [Hint: this mutation
affects 3 nucleotides].
Healthy: ATC ATC TTT
Cystic fibrosis: ATC ATT GGT
18. (10 marks) Next, Hiba uses her Biology notes to help her visualize exactly what those 9 letters
would look like in a CFTR gene. Draw a simplified diagram of the DNA sequence, ATC ATT
GGT. Your drawing can be done by hand on paper or made digitally as long as a clear photo or a
screenshot of your work is embedded below. For simplicity, the DNA structure should be drawn
as an untwisted ladder using the check list below as a guide:
Checklist:
(1 mark each)
The sequence of the DNA strand matches the DNA code given above for cystic fibrosis
The DNA strand is 9 nucleotides long
Each nucleotide has 3 parts – phosphate, deoxyribose sugar and nitrogen base
Nucleotides within the sugar-phosphate backbone are held together by phosphodiester bonds
The 2 polynucleotide strands are antiparallel
Complementary base-pairing is accurate
The number of hydrogen bonds between nitrogenous base pairs is accurate
The double stranded DNA resembles a ladder
(2 marks)
Labels are included: nucleotide, deoxyribose sugar, phosphate, nitrogenous base, hydrogen
bond, phosphodiester bond, and DNA backbone
Scenario: Next, Hiba starts to think more about how DNA mutations lead to problems with proteins.
For example, she doesn’t understand how a small change in her daughter’s DNA could lead to a problem
with the CFTR protein. To help Hiba navigate this question, answer the questions below:
19. (1 mark) Multiple choice: Within a cell, the CFTR gene is copied into mRNA through the
process of transcription. Based on the DNA sequence given in Question 18, what is the mRNA
sequence for CFTR in a person suffering from cystic fibrosis?
a. TAG TAA CCA
b. ATC ATT GGT
c. UTC UTT GGT
d. AUC AUU GGU
e. ATC ATT UUT
20. (1 mark) Multiple choice: What organelle does the transcription of CFTR takes place in?
a. Nucleus
b. Ribosome
c. Nuclear membrane
d. Endoplasmic reticulum
e. Cytoplasm
21. (1 mark) Multiple choice: What happens immediately after the CFTR mRNA molecule is
transcribed?
a. It stays in the nucleus
b. It goes to the nucleolus to get translated
c. It goes to the ribosome
d. It undergoes endocytosis
e. It gets converted to rRNA
22. (1 mark) Multiple choice: When _________ occurs, the CFTR mRNA is used as a template to
make CFTR protein.
a. Translation
b. Replication
c. Sequencing
d. Transcription
e. Diffusion
23. (1 mark) Multiple choice: During translation, codon sequences within an mRNA molecule are
read 3 nucleotides at a time. The sequence of a codon determines what ________ will be added
to the growing protein strand.
a. Anticodon
b. Amino acid
c. Nucleotide
d. tRNA
e. rRNA
Scenario: Hiba feels the pieces connecting now. She realizes that if you change a DNA sequence (like
the case with her daughter’s mutation in the CFTR gene), the resulting mRNA also gets changed during
transcription. This then causes the ribosome to add the wrong amino acid during translation, leading to
an improperly built CFTR protein. Hiba pauses and wipes her brow. While it is starting to make more
sense, she still doesn’t get why changing amino acids in the CFTR protein dramatically alters its
function. To help her understand this, answer the following questions:
24. (4 marks) Describe the structure of the CFTR protein by filling in the chart below:
- quaternary (4o)
structure
25. (2 marks) Using the information from the chart as a guide, explain in detail how a change to an
amino acid within CFTR protein (like in Douaa’s case) could affect its ability to transport ions
across the plasma membrane. Be sure to include appropriate terminology.
Changing an amino acid within a protein can cause the entire structure of the polypeptide, and this
change in a(n) amino acid can cause a change in the entire function of that protein. This can then cause a
change in the shape of the protein – which is called denaturation. When denaturation occurs, the protein
no longer holds its unique shape and therefore can no longer bond to its substrates. It will lose its tertiary
structure. This then results in the protein being nonfunctional, which leads to human disease (ie. Cystic
fibrosis). Transport of ions will no longer be possible with this protein due to its loss of function.
Scenario: The next day, Dr. Raghavan meets them in their hospital room along with a paediatric
respirologist, Dr. Zlochower, who specializes in cystic fibrosis. They explain that cystic fibrosis is not a
curable disease but that a range of treatments can help to control the symptoms, reduce complications
and make the condition easier to live with. In particular, one drug combination, Lumacaftor/Ivacaftor,
works by helping the mutant CFTR protein to fold in a more correct shape. This allows it to move some
chloride across the plasma membrane, thus reducing some of the respiratory symptoms of cystic fibrosis.
They ask Hiba to think about it, but that they would like to begin treatment already today.
26. 1 mark) Multiple choice – A protein that has lost its shape has undergone __________.
a. Crenation d. Non-disjunction
b. Pinocytosis e. Denaturation
c. Crossing over
Scenario: After they leave, Hiba glances over at Douaa who is sleeping soundly. Hiba admits to herself
that she should probably try to sleep at least a little in order to be as fresh as possible for Douaa’s
treatment. Hiba grabs a lumpy pillow and an extra blanket and curls up beside Douaa in the small bed.
She is just about to drift off when a terrible thought occurs to her – what if SHE gave Douaa cystic
fibrosis? After all, it WAS a genetic illness. Could she have somehow passed on a gene to Douaa that
causes her to be sick? She sits back up and goes back to the chair with her biology notes on inheritance.
She grabs a pencil and cautiously begins sketching out a Punnett square – she knows she won’t be able
to fall asleep until she figures it out.
27. The trait for cystic fibrosis is recessive (f) and the trait for healthy is dominant (F). Assuming
cystic fibrosis follows a simple Mendelian pattern of inheritance, answer the following:
a. (2 marks) What would Douaa’s genotype and phenotype be?
Genotype of Douaa = _ff_________________
Phenotype of Douaa = __cystic fibrosis is present________________
b. (2 marks) If Hiba and Douaa’s father are healthy, what must both their genotypes be?
Genotype of Hiba = __Ff________________
Genotype of Douaa’s father = __Ff________________
c. (2 marks) Complete a Punnett square showing a cross between Hiba and Douaa’s father.
F f
F FF Ff
f Ff ff
Epilogue: Douaa stayed in the hospital for many weeks as she received treatment and was monitored
closely by doctors. Hiba eventually got to bring her home – her mind filled with new knowledge about
how to care for Douaa and a backpack filled with new prescriptions and gear that would help Douaa to
breathe better. It would be a long and hard road – one filled with nebulizer masks, physical therapy,
and vibrating vests – but she also felt proud of how she had educated herself about cystic fibrosis and
would therefore be able to be a better advocate for Douaa in her years ahead.
28. (1 mark) Describe TWO ways in which case study questions like these can help build your skills
and better prepare you for your future career.
- These case studies can help build skills and prepare students for future careers in healthcare because
they allow us to think about what causes the diseases to occur, and to look at all the processes that have
to occur within the body. This could also allow us to have a greater understanding of how treatments
work, rather than just know that X treatment works for Y disease, but not being able to explain why that
treatment works for that specific disease. Having the background knowledge is important for 2 reasons –
it makes you a better healthcare provider, and 2, it allows you to better explain to patients why
something has happened to their body.