En TissueLyser LT Handbook
En TissueLyser LT Handbook
En TissueLyser LT Handbook
TissueLyser LT Handbook
Storage
The TissueLyser LT should be stored upright in a dry environment at 5–40°C.
Technical Assistance
At QIAGEN, we pride ourselves on the quality and availability of our technical
support. Our Technical Service Departments are staffed by experienced
scientists with extensive practical and theoretical expertise in sample and assay
technologies and the use of QIAGEN products. If you have any questions or
experience any difficulties regarding the TissueLyser LT or QIAGEN products in
general, please do not hesitate to contact us.
QIAGEN customers are a major source of information regarding advanced or
specialized uses of our products. This information is helpful to other scientists as
well as to the researchers at QIAGEN. We therefore encourage you to contact
us if you have any suggestions about product performance or new applications
and techniques.
For technical assistance and more information, please see our Technical
Support Center at www.qiagen.com/Support or call one of the QIAGEN
Technical Service Departments or local distributors (see back cover or visit
www.qiagen.com).
Safety Information
When working with chemicals, always wear a suitable lab coat, disposable
gloves, and protective goggles. For more information, please consult the
appropriate material safety data sheets (MSDSs). These are available online in
convenient and compact PDF format at www.qiagen.com/Support/MSDS.aspx
where you can find, view, and print the MSDS for each QIAGEN kit and kit
component.
24-hour emergency information
Emergency medical information in English, French, and German can be
obtained 24 hours a day from:
Poison Information Center Mainz, Germany
Tel: +49-6131-19240
Principle
The TissueLyser LT provides rapid and efficient disruption of up to 12 biological
samples, including animal and human tissues, plant tissues, bacteria, and
yeast. Disruption and homogenization are achieved through the beating and
grinding effect of beads on the sample material as they are shaken together in
2 ml sample tubes.
Disruption is critically important in order to release the nucleic acids from the
sample material. Homogenization of the material acts to shear carbohydrates
that may otherwise reduce binding of DNA and RNA to silica membranes or
magnetic particles. Sample disruption using, for example, a mortar and pestle
does not result in efficient homogenization. The TissueLyser LT both disrupts and
homogenizes sample material in one simple and reliable step.
The TissueLyser LT is easily programmed to provide variable speeds from 15 to
50 Hz (900–3000 oscillations/minute) and run times from 1 second to 1 hour
59 minutes.
Applications
The ability to process up to 12 samples per run makes the TissueLyser LT the
ideal front-end solution to access biological information for genomics,
transcriptomics, and proteomics applications.
The TissueLyser LT enables fast and uniform disruption of animal and human
tissues, plant tissues, bacteria, and yeast in the TissueLyser LT Adapter, which
holds up to twelve 2 ml sample tubes. QIAGEN offers 2 ml microcentrifuge
tubes as well as stainless steel beads for use with the TissueLyser LT Adapter.
For more details about these and other accessories for the TissueLyser LT, see
Appendix A (page 29) and the ordering information (page 32).
The TissueLyser LT provides efficient disruption of biological material in each
sample tube for reproducible, high-quality results in downstream applications
such as the purification of total DNA, RNA, or protein from a variety of human,
animal, and plant tissues. A wide range of QIAGEN sample purification kits are
compatible with the TissueLyser LT (see Tables 1–6, pages 7–10). Sample
purification can be performed manually or can be automated using the
QIAcube® , QIAsymphony® SP, QIAxtractor™, EZ1® Advanced, EZ1 Advanced
XL, or BioRobot® or BioSprint® workstations. For more information about
automated solutions from QIAGEN, see Appendix B (page 30) and visit
www.qiagen.com/automation.
This handbook provides guidelines on disrupting and homogenizing various
sample materials for subsequent purification of DNA, RNA, or protein. Specific
details on disruption and homogenization and nucleic acid or protein
Table 1. Kits for RNA purification from animal or human tissues using
spin columns
* No longer available.
Bead selection
For human, animal, and plant tissues, the optimal beads to use are 5–7 mm
(mean diamter) stainless steel beads. When disrupting tough tissue samples, we
recommend using 7 mm beads instead of 5 mm beads to improve disruption
efficiency. For disruption of cells, the optimal beads to use are 0.1–0.6 mm
(mean diameter) glass beads for bacteria, and 0.5 mm glass beads for yeast
and unicellular animal cells. It is essential that glass beads are pretreated
before use by washing in concentrated nitric acid.* Pretreated (acid-washed)
beads can be purchased from many vendors of biological supplies (e.g.,
Sigma, cat. nos. G1145, G1277, and G8772†). Disruption parameters for
samples not addressed in this handbook must be determined empirically.
* When working with chemicals, always wear a suitable lab coat, disposable gloves, and
protective goggles. For more information, consult the appropriate material safety data sheets
(MSDSs), available from the product supplier.
†
This is not a complete list of suppliers and does not include many important vendors of
biological supplies.
Figure 1. Loading the TissueLyser LT Adapter. Ensure that the TissueLyser LT Adapter is
balanced by loading samples tubes as shown above.
Procedure
1. Place 2 ml microcentrifuge tubes containing 1 stainless steel bead
(5 mm mean diameter) on dry ice for at least 15 min. Keep the insert
of the TissueLyser LT Adapter at room temperature (15–25°C).
2. Transfer up to 30 mg fresh or frozen tissue to the precooled tubes
and incubate for another 15 min on dry ice.
If handling tissue samples stabilized with RNAlater RNA Stabilization
Reagent or Allprotect Tissue Reagent, cooling on dry ice is not necessary.
3. Place the tubes into the insert of the TissueLyser LT Adapter, and
incubate at room temperature for 2 min to avoid freezing of lysis
buffer in step 4.
Do not incubate for longer than 2 min, otherwise the tissue will thaw,
resulting in potential RNA degradation.
Procedure
1. Place 2 ml microcentrifuge tubes containing 1 stainless steel bead
(5 mm mean diameter) into the insert of the TissueLyser LT Adapter.
Incubate on dry ice for at least 30 min.
2. Determine the amount of fresh plant material. Do not use more than
100 mg per sample.
Weighing tissue is the most accurate way to determine the amount.
3. Transfer the weighed tissue to the precooled tubes and incubate for
another 30 min on dry ice.
Alternatively, plant tissues can be flash-frozen in liquid nitrogen prior to
transfer to the precooled tubes. In this case, the additional 30 min
incubation on dry ice is not necessary.
Note: Do not freeze the adapter and tubes in liquid nitrogen, as this may
lead to breakage of the tubes.
4. Place the precooled insert with sample tubes into the base of the
TissueLyser LT Adapter, which is attached to the TissueLyser LT. Place
the lid of the TissueLyser LT Adapter over the insert, and screw the
knob until the lid is securely fastened.
Procedure
1. Pellet the bacterial cells by centrifugation. Immediately add the
appropriate volume of lysis buffer (e.g., Buffer RLT) to each sample
and vortex vigorously.
2. Transfer each sample to 2 ml microcentrifuge tubes containing 25–
50 mg acid-washed glass beads (150–600 μm mean diameter).
3. Place the tubes into the insert of the TissueLyser LT Adapter.
4. Place the insert with sample tubes into the base of the TissueLyser LT
Adapter, which is attached to the TissueLyser LT. Place the lid of the
TissueLyser LT Adapter over the insert, and screw the knob until the
lid is securely fastened.
5. Operate the TissueLyser LT for 5 min at 50 Hz.
The duration of disruption and homogenization depends on the sample
being processed and can be extended until no debris is visible.
6. Proceed with RNA purification.
Procedure
1. Pellet the yeast cells by centrifugation. Immediately add the
appropriate volume of lysis buffer (e.g., Buffer RLT) to each sample
and vortex vigorously.
2. Transfer each sample to 2 ml microcentrifuge tubes containing
approximately 600 μl acid-washed glass beads (450–550 μm mean
diameter).
3. Place the tubes into the insert of the TissueLyser LT Adapter.
4. Place the insert with sample tubes into the base of the TissueLyser LT
Adapter, which is attached to the TissueLyser LT. Place the lid of the
TissueLyser LT Adapter over the insert, and screw the knob until the
lid is securely fastened.
5. Operate the TissueLyser LT for 5 min at 50 Hz.
The duration of disruption and homogenization depends on the sample
being processed and can be extended until no debris is visible.
6. Proceed with RNA purification.
Procedure
1. Place 2 ml microcentrifuge tubes containing 1 stainless steel bead
(5 mm mean diameter) on dry ice for at least 15 min. Keep the insert
of the TissueLyser LT Adapter at room temperature (15–25°C).
2. Transfer up to 25 mg fresh or frozen tissue to the precooled tubes
and incubate for another 15 min on dry ice.
3. Place the tubes into the insert of the TissueLyser LT Adapter, and
incubate at room temperature for 2 min to avoid freezing of lysis
buffer in step 4.
Do not incubate for longer than 2 min, otherwise the tissue will thaw,
resulting in potential DNA degradation.
4. Immediately add the appropriate volume of lysis buffer (e.g., Buffer
ATL) to each tube.
5. Place the insert with sample tubes into the base of the TissueLyser LT
Adapter, which is attached to the TissueLyser LT. Place the lid of the
TissueLyser LT Adapter over the insert, and screw the knob until the
lid is securely fastened.
6. Operate the TissueLyser LT for 40 s at 30 Hz.
Note: Depending on the type of tissue, exceeding this homogenization time
and intensity may lead to significant fragmentation of genomic DNA.
However, for tough samples, it may be necessary to exceed this
homogenization time and/or intensity to improve disruption efficiency.
If working with fibrous tissues, cutting the tissue into smaller pieces before
starting disruption will improve disruption efficiency.
Procedure
1. Place 2 ml microcentrifuge tubes containing 1 stainless steel bead
(5 mm mean diameter) into the insert of the TissueLyser LT Adapter.
Incubate on dry ice for at least 30 min.
2. Determine the amount of fresh plant material. Do not use more than
100 mg per sample.
Weighing tissue is the most accurate way to determine the amount.
3. Transfer the weighed tissue to the precooled tubes and incubate for
another 30 min on dry ice.
Alternatively, plant tissues can be flash-frozen in liquid nitrogen prior to
transfer to the precooled tubes. In this case, the additional 30 min
incubation on dry ice is not necessary.
Note: Do not freeze the adapter and tubes in liquid nitrogen, as this may
lead to breakage of the tubes.
4. Place the precooled insert with sample tubes into the base of the
TissueLyser LT Adapter, which is attached to the TissueLyser LT. Place
the lid of the TissueLyser LT Adapter over the insert, and screw the
knob until the lid is securely fastened.
Procedure
1. Place 2 ml microcentrifuge tubes containing 1 stainless steel bead
(5 mm mean diameter) on dry ice for at least 15 min. Keep the insert
of the TissueLyser LT Adapter at room temperature (15–25°C).
2. Transfer up to 30 mg fresh or frozen tissue to the precooled tubes
and incubate for another 15 min on dry ice.
If handling tissue samples stabilized with Allprotect Tissue Reagent, cooling
on dry ice is not necessary.
3. Place the tubes into the insert of the TissueLyser LT Adapter, and
incubate at room temperature for 2 min to avoid freezing of lysis
buffer in step 4.
Do not incubate for longer than 2 min, otherwise the tissue will thaw,
resulting in potential protein degradation.
4. Immediately add the appropriate volume of lysis buffer (e.g.,
Mammalian Cell Lysis Buffer) to each tube.
5. Place the insert with sample tubes into the base of the TissueLyser LT
Adapter, which is attached to the TissueLyser LT. Place the lid of the
TissueLyser LT Adapter over the insert, and screw the knob until the
lid is securely fastened.
6. Operate the TissueLyser LT for 2–5 min at 50 Hz.
The duration of disruption and homogenization depends on the tissue being
processed and can be extended until no tissue debris is visible.
The QIAcube.
Workstation Capability
EZ1 Advanced Purification of genomic DNA or total RNA from 1–6
human samples per run
EZ1 Advanced XL Purification of genomic DNA or total RNA from 1–14
human samples per run
QIAsymphony SP Purification of genomic DNA or total RNA from 1–96
animal or human samples per run
BioRobot Universal Purification of genomic DNA or total RNA in 96-well
System format from animal or human samples, plus
downstream reaction setup
BioSprint 96 Purification of genomic DNA from up to 96 animal or
plant samples per run
Hong Kong Orders 800 933 965 Fax 800 930 439 Technical 800 930 425
Ireland Orders 1800 555 049 Fax 1800 555 048 Technical 1800 555 061
Korea (South) Orders 1544 7145 Fax 1544 7146 Technical 1544 7145