General Biology 2: Module 1
General Biology 2: Module 1
General Biology 2: Module 1
General Biology 2
1st or 2nd Semester
S.Y. 2021-2022
NAVOTAS CITY PHILIPPINES
General Biology 2 for Senior High School
Alternative Delivery Mode
1st / 2nd Semester
Second Edition, 2021
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Module 1......................................................................................3
Module 2......................................................................................10
Module 3......................................................................................19
Module 4......................................................................................25
Module 5......................................................................................33
Module 6......................................................................................37
Assessment .................................................................................43
Quarter 2 or Quarter 4
Module 7......................................................................................48
Module 8......................................................................................55
Module 9......................................................................................64
Module 10 ....................................................................................74
Module 11 ....................................................................................79
Module 12 ....................................................................................85
Assessment ..................................................................................89
References ..................................................................................96
Quarter 1 or Quarter 3
Directions: Choose the letter of the best answer. Write the chosen letter on a separate
sheet of paper.
2. Relative to the percent of time dominating the surface of Earth which organisms
have the longest reign?
3. Based on fossil evidence and absolute dating, Approximately how old is planet
Earth?
A. 6,000 C. 4,600,000,000
B. 46,000,000 D. There is no way to know
4. Which of the following refers to the The remnant of an organ that had a function
in an early ancestor?
5. What is the process in which humans breed organisms for certain traits?
A. natural selection
B. inheritance of acquired characteristics
C. artificial selection
D. descent without modification
6. Evolution is often described as "the theme that ties together all aspects of biology."
Why is this so?
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7. Which is an example of a macroevolutionary event?
A. the changing frequency of light to dark moths when the Industrial revolution
increased smoke in the environment.
B. the mass extinction of dinosaurs.
C. an isolated population of fruit flies grows really large.
D. a great reduction in population size of salmon due to over fishing.
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MODULE 1
This module was designed and written with you in mind. It is here to help you
enumerate the processes involved in genetic engineering and tackle the applications
of recombinant DNA. The scope of this module permits it to be used in many different
learning situations. The language used recognizes the diverse vocabulary level of
students. The lessons are arranged to follow the standard sequence of the course.
But the order in which you read them can be changed to correspond with the module
you are now using.
The module is divided into two lessons, namely:
● Lesson 1.1 – Genetic Engineering
● Lesson 1.2 – Applications of Recombinant DNA
After going through this module, you are expected to:
1. Outline the processes involved in genetic engineering
2. Discuss the applications of recombinant DNA
Lesson
GENETIC ENGINEERING
1.1
What Is Biotechnology?
By 2007, the human genome has been fully sequenced. The ability to sequence
DNA has been reliant on technological advancements.
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Creation of Genetically Modified Organisms (Genetic Engineering)
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Lifted from https://images.slideplayer.com/26/8714239/slides/slide_24.jpg
A stem cell is an unspecialized cell that can multiply forever and differentiate
into one or more types of specialized cells. Embryonic stem cells are stem cells that
can develop into any cell type and are obtained from early embryos at the blastocyst
stage. Adult stem cells replace non-reproducing specialized cells in the body. The
aim of stem cell research is to supply cells for the repair of damaged or diseased
organs.
5
Read the text below and accomplish the task afterwards.
Herbert Boyer and Stanley Cohen pioneered the technique of DNA cloning allowing
genes to be transferred from another biological species easily. Their work also gave
rise to the development of different recombinant proteins with therapeutic
applications like insulin and growth hormone. The former was cloned using
Escherichia coli in 1978. With this breakthrough, the first licensed drug produced
using recombinant DNA technology was human insulin, developed by Genentech,
licensed and marketed by Eli Lilly in 1982.
Scientists were able to identify and isolate the gene fragment or the gene of
interest, in this case, the gene that is responsible for producing insulin. Moreover,
they were able to isolate the bacterial DNA of E. coli. The plasmid and DNA
fragment were cut using a restriction enzyme. This DNA fragment was inserted
into the plasmid using a DNA ligase. When the DNA fragment was then placed
into the bacterial DNA, it was then introduced to the host cell (E. coli) and was
then amplified for the selection of transformed host cells.
Source: Cohen, S. N. (2013). DNA cloning: a personal view after 40 years. Proceedings of the National Academy of
Sciences, 110(39), 15521-15529.
Based on what you have just read, what ate the steps involved in genetic engineering?
1. _____________________________________________
2. _____________________________________________
3. _____________________________________________
4. _____________________________________________
5. _____________________________________________
Lesson APPLICATIONS OF
1.2 GENETIC ENGINEERING
1. Medical Applications
Diagnosis of Diseases. The identification of human genes in which mutation has
a role in genetic illnesses is one advantage of DNA technology. Scientists can use
PCR with primers corresponding to cloned disease genes to identify many human
genetic illnesses, then sequence the amplified result to look for the disease-causing
mutation. Genetic markers associated to the disease-causing allele can also be used
to screen for genetic diseases. SNPs (single nucleotide polymorphisms) are important
genetic markers. These are single base-pair locations with population variation. SNPs
cause DNA fragments to have various lengths when a restriction enzyme is used,
which is known as restriction fragment length polymorphism (RFLP).
Human Gene Therapy. The altering of a patient's genes is known as gene
therapy. Gene therapy has a lot of promise for curing diseases caused by a single
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faulty gene. Genes are delivered into certain types of cells, such as bone marrow,
using vectors. Gene therapy poses ethical concerns, such as whether or not human
germ-line cells should be treated to rectify a genetic abnormality in future
generations.
Pharmaceutical Products. The discovery of new pharmaceuticals to treat
diseases relies heavily on advances in DNA technology and genetic research.
• Synthesis of Small Molecules for Use as Drugs
Imatinib is a tiny chemical that prevents the overexpression of a leukemia-
causing receptor. Protein-based pharmaceuticals can be mass-produced on a
vast scale.
• Protein Production in Cell Cultures
In cultured host cells, a protein can be designed to secrete itself as it is
produced. Insulin, human growth hormones, and vaccinations can all
benefit from this.
• Protein Production by “Pharm” Animals and Plants
Genes from one species are inserted into the genome of another animal to
create transgenic animals. Transgenic animals are pharmaceutical "factories,"
producing vast quantities of ordinarily rare medicament compounds. Plants
called "pharma" are being created to produce human proteins for medical
purpose.
3. Environmental Cleanup
Microorganisms' metabolism can be altered through genetic engineering. Some
genetically modified bacteria can harvest minerals from the environment or
breakdown potentially harmful trash. To replace fossil fuels, biofuels employ crops
including corn, soybeans, and cassava.
4. Agricultural Applications
Agricultural productivity and food quality are being improved using genetic
engineering.
Animal Husbandry. The selective breeding process is sped up through
genetic engineering of transgenic animals. Beneficial genes can be passed down from
one variety to the next.
Genetic Engineering in Plants. A variety of crop plants have been genetically
modified to produce desirable features, according to agricultural specialists. For
delivering new genes into plant cells, the Ti plasmid is the most often employed
vector. Many valuable genes have been transferred through genetic engineering in
plants, including those for herbicide resistance, insect resistance, salt tolerance, and
better nutritional value of crops.
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Watch the video on ‘Genetically Modified Organism (GMO) - Myths and Truths’ at
https://www.youtube.com/watch?v=M_ztZGbLEJ0, and answer the question.
What are the counter arguments for the viewpoints concerning GM foods
below?
*Fill in the blanks using the words below. Some can be used more than once.
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GE helps eliminate GE will not help eliminate world hunger. It does not
world hunger protect the security of our (16) . There are no
GE crops available that increase intrinsic yield.
World hunger is actually an issue of (17) .
GMOs are safe There are no conclusive (18) on GMOs, as
independent researchers are prohibited to use GE crops
for their studies.
Watch the video on ‘How Are Genetically Modified Organisms (GMOs) Created?’
at https://www.youtube.com/watch?v=2G-yUuiqIZ0, and answer the question.
1. What are the advantages of GM foods (e.g. GM papaya)? Watch the video on ‘10
Worrying Facts About Genetically Modified Food’ at
https://www.youtube.com/watch?v=OB_0OLKGMpQ, and answer the question.
2. What are the disadvantages of GM foods?
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MODULE 2
This module was designed and written with you in mind. It is here to help you
trace the history of life on Earth and enumerate some mechanisms that produce
alterations in populations. The scope of this module permits it to be used in many
different learning situations. The language used recognizes the diverse vocabulary
level of students. The lessons are arranged to follow the standard sequence of the
course. But the order in which you read them can be changed to correspond with
the module you are now using.
The module is divided into two lessons, namely:
● Lesson 2.1 – History of Life on Earth
● Lesson 2.2 – Mechanisms That Change the Populations
After going through this module, you are expected to:
1. Describe general features of the history of life on Earth, including generally
accepted dates and sequence of the geologic time scale and; characteristics of
major groups of organisms present during these time periods
2. Explain the mechanisms that produce change in populations from generation
to generation (e.g., artificial selection, natural selection, genetic drift,
mutation, recombination)
Lesson
HISTORY OF LIFE ON EARTH
2.1
On early Earth, chemical and physical processes may have formed very primitive
cells in a series of stages:
1. Small organic compounds are synthesized abiotically.
2. These tiny molecules are joined together to form macromolecules.
3. Molecules are packaged into protocells.
4. Self-replicating molecules arose from the origins of self-replicating molecules.
Earth, like the rest of the solar system, formed around 4.6 billion years ago.
Before 4.2 to 3.9 billion years ago, the Earth was likely bombarded by rocks and ice,
which evaporated water and prevented seas from forming. Water vapor and
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chemicals generated by volcanic eruptions are likely to have been present in Earth's
early atmosphere (nitrogen, nitrogen oxides, carbon dioxide, methane, ammonia,
hydrogen, hydrogen sulfide).
Protocells
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Petrified Organic material is converted petrified trees; coal balls
into stone (fossilized plants and
their tissues, in round
ball shape)
Original remains Preserved wholly (frozen in wooly mammoth and
ice, trapped in tar pits, dried/ amber from basaltic sea
desiccated inside caves in region.
arid regions or encased in
amber/ fossilized resin)
Carbon film Carbon impression in leaf impression on the
sedimentary rocks rock
Trace/ Ichnofossils Record the movements and trackways, toothmarks,
behaviors of the organism gizzard rocks, coprolites
(fossilized dungs),
burrows and nests
Knowing the age of a fossil can help a scientist establish its position in the
geologic time scale and find its relationship with the other fossils. There are two ways
to measure the age of a fossil: relative dating and absolute dating.
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Source: https://clarkscience8.weebly.com/uploads/2/6/3/7/2637711/law-of-superposition.jpg?1009
Source: https://1.bp.blogspot.com/-dKHUSesd49Y/UyDGUk1q7yI/AAAAAAAAAXI/JvAVUFu0eZY/w1200-h630-p-k-
no-nu/horizontalstrata.gif
Source: http://www.geol.umd.edu/~jmerck/geol100/images/24/crosscutting.jpg
Absolute Dating. This type of age-determining manner determines the actual age
of the fossil. Through radiometric dating, using radioactive isotopes carbon-14 and
potassium-40. Considers the half-life or the time it takes for half of the atoms of the
radioactive element to decay. The decay products of radioactive isotopes are stable
atoms.
Key events in life’s history include the origins of single-celled and multi-celled
organisms and the colonization of land
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Mesozoic, and Cenozoic are the three eras of the Phanerozoic. Extinction events in
the fossil record correspond to major borders between geological divisions.
Source: https://bio1151.nicerweb.com/Locked/media/ch25/25_T01-GeologicRecord-L.jpg
Mass Extinctions
Most species that have ever existed are now extinct, according to the fossil
record. Changes in a species' environment can lead to extinction. At times, the pace
of extinction has skyrocketed, resulting in a mass extinction. Disruptive global
environmental changes are the cause of mass extinction.
Each of the five big extinction events resulted in the extinction of more than
half of the Earth's species.
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1. Ordovician-Silurian Extinction: 440 million years ago (species made
extinct: 85%)
The first mass extinction on Earth happened during a time when animals like
corals and shelled brachiopods dominated the world's shallow waters but had not
yet made their way onto land. After first appearing approximately 3.7 billion years
ago, life was beginning to spread and diversity. However, some 440 million years ago,
a climate shift led sea temperatures to rise, resulting in the extinction of the bulk of
marine life. A quick beginning of mass glaciation enveloped the southern
supercontinent, Gondwana, near the end of the Ordovician epoch. Glaciation on this
magnitude trapped large amounts of the world's water and substantially dropped
global sea levels, robbing many species of their essential habitats, damaging food
chains, and reducing reproductive success.
2. Late Devonian extinction: ~ 365 million years ago (species made extinct:
75%)
The Devonian epoch, also known as the "age of fish," saw the emergence and
collapse of many prehistoric marine species. Although creatures had begun to
emerge on land by this period, the majority of life still swam in the waters. That is,
until vascular plants like trees and flowers triggered a second global extinction.
Plants unwittingly modified the ground they lived on by changing rock and rubble
into soil as they developed roots. This nutrient-rich soil eventually found its way into
the world's oceans, generating massive algae blooms. These blooms effectively
created massive "dead zones," which are areas where algae deplete oxygen in the
water, killing marine life and disrupting marine food networks. Species that couldn't
adjust to the lower oxygen levels and lack of food perished. Dunkleosteus, a 33-foot-
long (10-meter) armored fish, was one of the sea monsters that was wiped off of the
world's oceans. This terrifying predator wore a helmet made of bone plates that
wrapped its entire head and gave it a fang-like cusp on its jaw.
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volumes of carbon dioxide, similar to the Permian extinction, causing climatic change
and destroying life on Earth. Sea levels climbed and acidified as global temperatures
soared, ice melted, and sea levels rose. Many marine and land species perished as a
result, including enormous prehistoric crocodiles and flying pterosaurs. Alternative
explanations for the mass extinction include rising carbon dioxide levels releasing
trapped methane from permafrost, which would have resulted in a similar chain of
events.
Stratigraphy is the oldest method that archaeologists use to date artifacts. It is based
on the Law of Superposition which states that as long as layers of soil are
undisturbed the oldest layer will be on the bottom and the most recent will be located
on the top. Below is a Stratigraphy Map showing the different layers of soil deposit,
layers A-G. Within these layers different artifacts were found, numbered 1-9.
Answer the following questions keeping in mind the Law of Superposition.
Artifacts:
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Questions:
1. Which is older: the arrowhead or the spear point?
2. If G is a well, who do you think dug it?
3. Is layer B older or more recent than layer D?
4. Were there humans living here when layer E was being formed? Support your
answer. What about layer B?
5. Name an animal that lived here when layer D was being formed.
6. Layer F is a garbage pit. What layer were the people who dug it living in?
What artifacts might have belonged to the person who dug it?
7. How might the mastodon have been killed? Who do you think might have
killed it? Support your answers.
8. Which is older: the clay pottery sherd or the sharpened deer bone?
9. Which was deposited more recently: the fish bones or level D?
When all these conditions are met, the population is said to be in Hardy-Weinberg
equilibrium. If the allele or genotype frequencies do change over time, then scientists
assume that 1 or more of the conditions is not being met and the population may be
evolving. It allows scientists to estimate the allele and genotype frequencies in a
population.
If a population includes only 2 alleles for a given trait, the proportion of dominant
alleles (p) plus the proportion of recessive alleles (q) is equal to 1 (i.e., 100% of the
population). Squaring both sides of the equation p + q = 1 produces the equation:
p2 + 2pq + q2 = 1. Here p2 is the number of individuals with a homozygous dominant
genotype, 2pq is the number of individuals with a heterozygous genotype, and q2 is
the number of individuals with a homozygous recessive genotype.
Materials:
▪ 4 big packs of white chocolate Knick Knacks
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▪ 4 big packs of dark chocolate Knick Knacks
▪ Plates or napkins
▪ Large bowl (for food)
▪ Student Data Sheet
Preparation:
1. Pour the contents of all 4 bags of Knick Knacks into a large bowl—the lake.
2. Depending on class size, you may wish to divide your class into pairs or allow
them to work individually.
3. Give each student or pair a copy of the Student Data Sheet, if desired, and a
plate or napkin; have them wash their hands before beginning.
4. Explain that dark ones are homozygous recessive individuals (gg) and that white
ones display the dominant phenotype and therefore may be either homozygous
dominant (GG) or heterozygous (Gg).
Activity 1 (Procedures):
1. Remove 10 pieces from the lake and place them on the plate or napkin. In order
to ensure random choice, have students close their eyes.
2. Students record the number of white and dark ones in Table 1 as Generation 1.
3. Close your eyes and to select and eat 3 of their 10 pieces at random.
4. Return to the lake, close their eyes, and randomly select 3 new pieces to replace
those that were eaten.
5. Record their new count of white and dark pieces in Table 1 as Generation 2.
6. Repeat steps 3–5 until they have data for 5 generations.
7. After data have been collected, use the Hardy-Weinberg equation to
calculate p, q, p2, q2, and 2pq for each generation.
Activity 2 (Procedures):
1. Remove 10 pieces from the lake and place them on the plate or napkin. In order
to ensure random choice, close your eyes.
2. Record the number of white and dark pieces in Table 1 as Generation 1.
3. Close your eyes and to select and eat 3 of their 10 pieces at random.
4. Return to the lake, close your eyes, and randomly select 3 new pieces to replace
those that were eaten.
5. Record their new count of white and dark pieces in Table 1 as Generation 2.
6. Repeat steps 3–5 until they have data for 5 generations
7. After data have been collected, use the Hardy-Weinberg equation to
calculate p, q, p2, q2, and 2pq for each generation.
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MODULE 3
This module was designed and written with you in mind. It is here to help you
understand Evolution and the Development of Evolutionary thought. The scope of
this module permits it to be used in many different learning situations. The language
used recognizes the diverse vocabulary level of students. The lessons are arranged
to follow the standard sequence of the course. But the order in which you read them
can be changed to correspond with the module you are now using.
The module is divided into two lessons, namely:
● Lesson 3.1 – Evolution
● Lesson 3.2 – The Development of Evolutionary Thought
After going through this module, you are expected to:
1. Show patterns of descent with modification from common ancestors to
produce the organismal diversity observed today
2. Trace the development of evolutionary thought
Lesson
EVOLUTION
3.1
What is Evolution?
Their model was called Natural Selection and was analogous to "artificial
selection" (e.g., domestication). Darwin and Wallace's observations are the following:
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Variability: There is variation in all populations. No two members of a
population are totally identical. Some sources of variation include age and sexual
differences; the results of factors that happened during the lifetime (differences of
nutrition, disease, accident, etc.); individual difference in inherited traits; etc. The
idea that individual variation was significant was a blow to previous models of
Nature. Earlier natural historians believed in perfect types, and thought variation
was degeneration from those types. Darwin and Wallace documented that the
variation is the reality, and the "perfect types" were just myths.
Heritability: Some (but not all) variation is inherited. The Causal mechanism
of inheritance is unknown in Darwin's time and the Discovery by Gregor Mendel
of genetics came later, and discovery of DNA came later still. Each little instruction
is called a gene: a piece of code that helps the cell to build a protein Most genes have
slightly different versions called alleles that produce different end products. It is
these alleles (one copy for each gene per parent) that is passed on to offspring.
Different combinations of alleles result in different traits being expressed (that is,
different phenotypes). Mutations are new variations in heritable traits, caused by
miscopied DNA (duplication of parts of genes; miswritten code; etc.). Some mutations
may be deleterious (they result in harm to the organism) and still Many mutations
may be neutral. A small number of mutations may wind up being beneficial (the
variation they produce allow it to do better somehow in the world)
Superfecundity: Organisms produced far more offspring than can possibly
survive, which elated another previously held belief: that Nature was perfect and
everything had its place.
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• Cannot evolve towards something with a goal in mind; only favors variations that
are advantageous at the time of selection
• Darwin and Wallace observed that some individuals might be better "fit" to the
"circumstances of life" which would now call the called an "environment" or
"ecosystem", but also that environments change over time, so that there is no
absolute measure of "fitness" as such
• Thus, unlike popular idea, evolutionary fitness is NOT being the biggest, strongest,
fastest, etc. It is being better suited to the environment in some fashion relative
to other members of your population.
• Thus, in evolution, the best measure of Fitness = Reproductive Success
From Darwin and Wallace, the beginning of modern evolutionary theory has five major
components:
• Evolution is descent with modification: that is, the anatomical traits and
other features of populations change over time from generation to generation
• These modifications occur relatively slowly on average: small incremental
changes added up over many generations
• Populations may diverge into two or more distinct lineages (which may or may
not produce their own descendant branches)
• All species share a common ancestry: thus, the shape of the history of lineages
can be seen as a Tree of Life
• Much (although not all) evolutionary change is due to natural selection, which
is the sole process for producing adaptations
Create a semantic web of the concept of Evolution by Charles Darwin and Alfred
Wallace.
EVOLUTION
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Lesson HISTORY OF EVOLUTIONARY
3.2 THOUGHT
His process:
• new species form when animals migrate
• new environments then cause changes to the species
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• Even when resources are plentiful, populations tend to continue growing until
they outstrip their food supply
• Once resources become scarce, populations experience a struggle for existence,
in which (for humans) poverty, disease and famine ensue.
Lyell was an English geologist and contemporary of Charles Darwin and Alfred
Russell Wallace. Both were heavily influenced by Lyell’s “Principles of Geology”. Lyell
visited Mount Etna in Sicily. He saw the crater had been built up by numerous small
eruptions, and understood that geological events were always changing the shape of
the Earth. Lyell also observed fossil mollusks, similar to modern species, and in
noting the number of layers in sedimentary rock, he inferred that the Earth must be
very old.
Charles Darwin
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Create a table that summarizes the contribution of the scientists for Evolutionary
Thought
Scientist/Proponent Brief Description of contribution to evolutionary thought
Write a 300-word persuasive essay that aims to enlighten people that the concept of
Evolution is not against Christian or any other religious values.
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MODULE 4
This module was designed and written with you in mind. It is here to help you
master the Evidence of Evolution. The scope of this module permits it to be used in
many different learning situations. The language used recognizes the diverse
vocabulary level of students. The lessons are arranged to follow the standard
sequence of the course. But the order in which you read them can be changed to
correspond with the textbook you are now using.
The module is divided into two lessons, namely:
• Lesson 4.1 – Evidence of Evolution
• Lesson 4.2 – Evolutionary Relationships
Lesson
Evidence of Evolution
4.1
Broadly speaking, evolution is a change in the genetic makeup (and often, the
heritable features) of a population over time. Biologists sometimes define two types
of evolution based on scale:
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• Macroevolution, which refers to large-scale changes that occur over extended
time periods, such as the formation of new species and groups.
• Microevolution, which refers to small-scale changes that affect just one or a
few genes and happen in populations over shorter timescales.
Image credit: "Darwin's tree of life, 1859," by Charles Darwin (public domain).
More closely related groups of species have more recent common ancestors in
this tree model, and each group will tend to share characteristics that were present
in its most recent common ancestor. This concept can be used to "work backwards"
and determine how organisms are connected based on their similar characteristics.
Homologous features
If two or more species share a unique physical feature, such as a complex
bone structure or a body plan, they may all have inherited this feature from a
common ancestor. Physical features shared due to evolutionary history (a common
ancestor) are said to be homologous.
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Image credit: "Understanding evolution: Figure 7," by OpenStax College, Biology, CC BY 4.0 .
Analogous features
To make things a little more interesting and complicated, not all physical
features that look alike are marks of common ancestry. Instead, some physical
similarities are analogous: they evolved independently in different organisms
because the organisms lived in similar environments or experienced similar selective
pressures. This process is called convergent evolution.
For example, two distantly related species that live in the Arctic, the arctic fox
and the ptarmigan (a bird), both undergo seasonal changes of color from dark to
snowy white. This shared feature doesn't reflect common ancestry - i.e., it's unlikely
that the last common ancestor of the fox and ptarmigan changed color with the
seasons4• Instead, this feature was favored separately in both species due to similar
selective pressures. That is, the genetically determined ability to switch to light
coloration in winter helped both foxes and ptarmigans survive and reproduce in a
place with snowy winters and sharp-eyed predators.
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Image credit: "Understandingevolution: Figure 6," by OpenStax College, Biology, CC BY 4.0.
In general, biologists don't draw conclusions about how species are related on the
basis of any single feature they think is homologous. Instead, they study a large
collection of features (often, both physical features and DNA sequences) and draw
conclusions about relatedness based on these features as a group.
Molecular biology
These shared features suggest that all living things are descended from a
common ancestor, and that this ancestor had DNA as its genetic material, used the
genetic code, and expressed its genes by transcription and translation. Present-day
organisms all share these features because they were "inherited" from the ancestor
(and because any big changes in this basic machinery would have broken the basic
functionality of cells).
Although they're great for establishing the common origins of life, features like
having DNA or carrying out transcription and translation are not so useful for
figuring out how related particular organisms are. If we want to determine which
organisms in a group are most closely related, we need to use different types of
molecular features, such as the nucleotide sequences of genes.
Homologous genes
Biologists often compare the sequences of related genes found in different
species (often called homologous or orthologous genes) to figure out how those
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species are evolutionarily related to one another. The basic idea behind this approach
is that two species have the "same" gene because they inherited it from a common
ancestor. For instance, humans, cows, chickens, and chimpanzees all have a gene
that encodes the hormone insulin, because this gene was already present in their
last common ancestor.
Biogeography
The geographic distribution of organisms on Earth follows patterns that are
best explained by evolution, in combination with the movement of tectonic plates
over geological time. For example, broad groupings of organisms that had already
evolved before the breakup of the supercontinent Pangaea (about 200 million years
ago) tend to be distributed worldwide. In contrast, broad groupings that evolved after
the breakup tend to appear uniquely in smaller regions of Earth. For instance, there
are unique groups of plants and animals on northern and southern continents that
can be traced to the split of Pangaea into two supercontinents (Laurasia in the north,
Gondwana in the south). The evolution of unique species on islands is another
example of how evolution and geography intersect. For instance, most of the mammal
species in Australia are marsupials (carry young in a pouch), while most mammal
species elsewhere in the world are placental (nourish young through a placenta).
Australia's marsupial species are very diverse and fill a wide range of ecological roles,
because Australia was isolated by water for millions of years, these species were able
to evolve without competition from (or exchange with) mammal species elsewhere in
the world.
Fossil record
Fossils are the preserved remains of previously living organisms or their
traces, dating from the distant past. The fossil record is not, alas, complete or
unbroken: most organisms never fossilize, and even the organisms that do fossilize
are rarely found by humans. Nonetheless, the fossils that humans have collected
offer unique insights into evolution over long timescales
Fossils document the existence of now-extinct species, showing that different
organisms have lived on Earth during different periods of the planet's history.
How can the age of fossils be determined? First, fossils are often contained in
rocks that build up in layers called strata. The strata provide a sort of timeline, with
layers near the top being newer and layers near the bottom being older. Fossils found
in different strata at the same site can be ordered by their positions, and "reference"
strata with unique features can be used to compare the ages of fossils across
locations. In addition, scientists can roughly date fossils using radiometric dati ng,
a process that measures the radioactive decay of certain elements.
29
Study the image to the left and complete the table below
WHALE
CAT
BAT
EXPLAIN THIS IN NOT MORE THAN 5 SENTENCES. Charles Darwin published his
book On the Origin of Species in 1859. Of the different types of evidence that you
have examined, which do you think he relied upon the most, and why?
Lesson
Evolutionary Relationships
4.2
30
level of individuals and populations, there is just variability, heritability, and super
fecundity.
The most important pattern: the Tree of Life. Darwin and Wallace
demonstrated the reality of Divergence through Time and Common Ancestry:
• Divergence from common ancestors
o Two (or more) distinct variations in an ancestral population convey
their own advantage against the rest of the population
o Over time, these two (or more) variations will become more distinct from
each other
o If they diverge enough, they will no longer be able to mate with each
other: will be different species
o Divergence can also occur (perhaps more commonly!) if an ancestral
population is divided into two or more by changes in geography:
because natural selection works by chance survivals, it is unlikely that
exactly the same variations of the ancestral population will survival in
the two or more separated populations. Over time, if the populations
meet again, the accumulation of variations may be significant enough
that they are distinct species.
• Common Ancestry
o Closely related species are close because their common ancestor
diverged relatively recently in Earth history
o Other species are more distantly related because of divergences of
THEIR common ancestors even farther back in time
o No separate origins for different groups; instead, patterns of common
ancestry and diverging descendants
Thus, the basic pattern of the history of living things is a Tree of Life, where
the trunk and stems are lineages of ancestors, the branching points representing
divergences between lineages, and the tips of the branches living species (or extinct
species that died without descendants).
31
o Niche Partitioning: during an adaptive radiation, the early members
of the divergence will (naturally) still be relatively similar to each other
(and to their common ancestor) in terms of size, shape, behavior, etc.
Over time, those variations in each lineage that are least like their
relatives will more likely survive, because they will have less
competition. Consequently, the different species will "partition" (divide
up) the niches and the resources.
• Convergence: Some adaptations are mechanically advantageous and easy to
produce developmentally. Different lineages of organisms can independently
develop some of the same features, even though ancestors were quite different
(i.e., streamlining in sharks, tunas, ichthyosaurs & dolphins).
• Co-evolution: Selection of one species due to activity of an interactor leads to
counter-selection in response of the first species
o For example, plant species develop traits (shapes, colors, tastes of
nectar) that favor a select few numbers of pollinators, thereby
promoting greater chance of getting their own pollen rather than some
other plant's
o Or, in the Galápagos: drier islands have fewer small plants, so tortoises
preferentially feed on Opuntia cacti. Cacti on these islands have evolved
taller woody trunks, and in response the tortoises have evolved a
"saddle-backed" shell that allows them to reach higher than dome-
backed ancestors.
Extinction: The termination of a lineage. (If a species "dies out" by evolving
into another species, this is more properly called a pseudoextinction). Extinctions
occur throughout Earth History. What is more remarkable is Mass Extinction: the
geologically sudden disappearance of many diverse groups of organisms, which are
not immediately replaced by ecological equivalents. Some mass extinction events
seem to correlate with asteroid impacts; many with major volcanic episodes; others
with glaciation.
Let’s Analyze.
Please answer the following questions with not more than 5 sentences.
1. If Humans’ ancestors are from monkeys, why do we still have monkeys today?
2. What makes Evolution a “descent with modification?
32
MODULE 5
This module was designed and written with you in mind. It is here to help you
explain how structural and developmental characteristics and Relatedness of
DNA sequences are used in classifying living things. The scope of this module
permits it to be used in many different learning situations. The language used
recognizes the diverse vocabulary level of students. The lessons are arranged
to follow the standard sequence of the course. But the order in which you read
them can be changed to correspond with the module you are now using.
Lesson
DNA Sequencing and Taxonomy
5
Molecular biology traces its origin to the 1930s, when scientist focused on
explaining the phenomena of life by studying the macromolecules that generate life.
The chief discoveries of molecular biology took place in a period of only about 25
years, starting in 1940, when George Beadle and Edward Tatum established the
existence of a precise relationship between genes and protein (they shared the Nobel
33
Prize in Medicine in 1958). Another 15 years were required before new and more
sophisticated technologies, united today under the name genetic engineering, would
permit the isolation and characterization of genes.
The truly fundamental discovery during the first 25 years of molecular biology
took place in 1953, when James Watson and Francis Crick discovered the double
helical structure of DNA molecule (for which they shared the Nobel Prized in Medicine
in 1962). And 30 years later, Kary Mullis jump-started the field of genetic engineering
when he invented the Polymerase Chain Reaction, an elegantly simple “biological
copy machine” that rapidly can produce many copies of specific piece of DNA in the
lab. Mullis and Michael Smith shared the 1993 Nobel Prize in Chemistry for devising
this technological milestone in molecular biology. DNA sequencing has many
applications for understanding cancers, inherited genetic diseases, effects of the
environment on our genome, and even understanding biodiversity of our planet.
34
Act. 1 : How DNA control the work of a cell?
Below are two partial sequences of DNA bases (1 strand of DNA). Sequence 1 is from
human and sequence 2 is from cow. In both human and cows, this sequence is part
of a set of instruction for controlling body function. In this case the sequence
contains the gene to make the protein insulin. Insulin is necessary for the uptake of
sugar from the blood. Without insulin, a person cannot use digest sugars the same
way others can and will have a disease called diabetes.
Directions:
1. Using the DNA sequence, make a complimentary RNA strand from the human
and the cow. Write the RNA directly below the DNA strand (remember to
substitute U’s for T’s in RNA)
2. Use the genetic code to determine the codon.
Q1. Comparing the human gene to cow gene, how many of the codons are the same?
Q2. How many amino acids in the sequence are the same?
Q3. Could 2 humans or 2 cows with differences in their DNA sequences for insulin,
still make the same insulin proteins. How?
35
Cytochrome c is part of the electron transport chain down which electrons are
passed to oxygen during cellular respiration. Cytochrome c is found in the
mitochondria of every aerobic eukaryote - animal, plant, and protist which is used
to study evolutionary relationships of different organisms.
Act. 1 Is there Similarity?
Directions: Compare and contrast the amino acid sequence of different organisms
to human. List your answer on the table below.
Total
Number
of amino
acid
36
MODULE 6
This module was designed and written with you in mind. It is here to help you trace
the history of cell theory and describe cell structure and functions. The scope of this
module permits it to be used in many different learning situations. The language
used recognizes the diverse vocabulary level of students. The lessons are arranged
to follow the standard sequence of the course. But the order in which you read them
can be changed to correspond with the module you are now using.
Lesson
Taxonomy and Biosystematics
6
37
History of Classification
• This “tree branching” of evolution is the basis for classifying organisms into
their respective taxonomic categories, with each branch specifying a particular
differentiated trait.
• The seven taxonomic categories in are nested within one another and each
category serves as a “filter” for narrowing down organisms who share
particular traits, or more accurately, share the same ancestry.
38
• The taxonomic system is hierarchical, with taxa at a lower level grouped into
a smaller number of taxa in the next higher level. Just as species are grouped
into genera, genera with similar characteristics are grouped into families, and
similar families are placed into the same order. Orders with common
properties are placed into the same class, and classes with similar
characteristics into the same phylum (plural, phyla). Finally, the phyla are
assigned to one of several great groups, the kingdoms.
Lifted from Campbell Biology 11th Ed
Carl Woese
▪ The three-domain system was first introduced by Carl Woese in 1990. This
classification system also is known as the Six Kingdoms and Three Domains
39
Classification because it divides the life forms into three domains and six
kingdoms.
▪ This classification system divides the life based on the differences in the 16S
ribosomal RNA (rRNA) structure and as well as the cell’s membrane lipid
structure and its sensitivity to antibiotics. The main difference from earlier
classification systems is the splitting of archaea from bacteria.
https://openstax.org/details/books/Biology 2e - OpenStax
40
Today three-domain system and six kingdom system of classification is
adopted.
Phylogenetic Trees
The tree corresponds quite well to what we have long believed to be the
evolutionary relationships among the vertebrates. But there are some anomalies. It
indicates, for example, that the primates (humans and monkeys) split off before the
split separating the kangaroo, a marsupial, from the other placental mammals. This
is certainly wrong. But sequence analysis of other proteins can resolve such
discrepancies.
But what of humans and the great apes? Their cytochrome c molecules are
identical and can tell us nothing about evolutionary relationships. However, some
proteins have evolved much more rapidly than cytochrome c, and these can be used
to decipher recent evolutionary events. During blood clotting, short peptides are cut
41
from fibrinogen converting it into insoluble fibrin. Once removed,
these fibrinopeptides have no further function. They have been pretty much free
from the rigors of natural selection and have, consequently, diverged rapidly during
evolution. So, they provide data useful in sorting out the twigs of phylogenetic trees
of mammals, for example.
Act. 1 Taxo-Table
Directions: Fill in the table below of the missing details about classification of the
given organisms.
Earthworm
Paramecium
42
Quarter 1 or Quarter 3
Choose the letter of the correct answer
1. Which of the following can visualize 100,000 years in the geologic history of
Earth?
6. Which will be a most likely initial effect of a sudden major climatic change?
43
8. Which of these are involve in genetic engineering?
10. What is the main reason for the competition for food, space, and resources
among members of a certain species?
46
Quarter 2 or Quarter 4
Choose the letter of the correct answer
1. Which of the following is NOT a pattern found on pathogens that the immune
system recognizes as foreign?
A. Single stranded RNA C. Presence of lipopolysaccharide
B. Presence of N-formyl methionine D. Double stranded DNA
3. When you hold your breath, which of the following gas changes in the blood
first leads to the urge to breathe?
A. Rising oxygen C. Rising carbon dioxide
B. Falling oxygen D. Falling carbon dioxide
4. In humans, where can we locate the gland that secretes the hormone that
determines the basal rate of metabolism and normal growth?
A. in the brain C. in front of the trachea
B. in bones D. in the pelvis
5. A reflex action is a pathway that typically involves several neurons. Which of the
following best describes a reflex?
A. an action that has to be learned
B. an action that involves conscious thought
C. an action that is repeated
D. an involuntary response to a stimulus
47
8. If the environment gets colder, why does our body shiver?
A. To lower the body temperature C. To increase body temperature
B. To get frostbite D. To avoid fever
10. How would you describe the lack of water in the blood?
A. Dehydration B. Hydration C. Nutrition D. Malnutrition
47
MODULE 7
This module was designed and written with you in mind. It is here to help you
compare and contrast the manners of reproduction and development of plants and
animals. The scope of this module permits it to be used in many different learning
situations. The language used recognizes the diverse vocabulary level of students.
The lessons are arranged to follow the standard sequence of the course. But the order
in which you read them can be changed to correspond with the module you are now
using.
Lesson
REPRODUCTION
7.1
48
Fission is the separation of a parent into two or more individuals of about the
same size. On the other hand, new individuals emerge from the outgrowths of
existing ones in budding. Fragmentation is the breaking of the body into fragments,
some of which develop into adults and others which do not. Fragmentation must be
accompanied with regeneration, or the regrowth of bodily components that have been
lost. The formation of a new human from an unfertilized egg is known as
parthenogenesis.
49
Asexual and Sexual Reproduction in Plants
Flowers, double fertilization, and fruits are unique features of the angiosperm life cycle
Source: http://hiscience.pbworks.com/f/1421438290/AngiospermCycle.gif
50
Double Fertilization in Angiosperms
Source: https://qph.fs.quoracdn.net/main-qimg-
4c5fc9fe8851eb35ca9ac90977466364
Test-Tube Cloning and Related Techniques. In vitro procedures have been used
by plant scientists to generate and clone new plant varieties. In response to plant
hormones, a callus of undifferentiated cells can grow branches and roots.
51
Sort the following phrases into the relevant column using what you know
about asexual and sexual reproduction. If the term has anything to do with asexual
reproduction, put it in the left-hand column. If the term has anything to do with
sexual reproduction, put it in the right-hand column. Put the term in both columns
if it has to do with both types of reproduction.
Terms: DNA, male and female, one parent, unique, spores, uniform, traits, egg
and sperm.
Asexual Sexual
52
Lesson
7.2
DEVELOPMENT
Animal Development
An animal's life cycle includes numerous
stages of development. Metamorphosis and gamete
creation, as well as embryonic development, are all
included. Despite the fact that animals have varied
body designs, they share many basic developmental
mechanisms and use the same set of regulating
genes. Biologists investigate development using
model organisms, which are chosen for their ease of
study in the laboratory.
The process of a single sperm cell uniting Developmental events in the life
with a single egg cell to generate a zygote is known cycle of a frog
as fertilization. Cleavage is a rapid, repeated cycles Lifted from Campbell Biology 11th Ed.
of mitotic cell division in which the embryo's overall
size does not change. Following cleavage, the developing embryo is referred to as a
blastula. The remarkable rearrangement (moving) of cells in the blastula to generate
the embryonic tissue layers is known as gastrulation. These tissue layers will
eventually give rise to the adult animal's tissues and organs. Organogenesis is the
process of cell division and differentiation that leads to the creation of organs and
tissues. Gastrulation and organogenesis, the last two steps, collectively contribute to
morphogenesis, or the biological processes that determine an organism's shape and
body organization.
Plant Development
Embryo development frequently comes before endosperm development.
Endosperm stores nutrients that can be utilized by the seedling in most monocots
and some eudicots. The food reserves of the endosperm are exported to the
cotyledons in other eudicots. The fertilized egg is split into a basal cell and a terminal
cell during the zygote's first mitotic cycle. A multicellular suspensor is produced by
the basal cell, which binds the embryo to the parent plant. The terminal cell is
responsible for the majority of the embryo's development. The embryo elongates as
the cotyledons develop. Because the dried seed has a low water potential, germination
is dependent on imbibition, or water uptake. The radicle (embryonic root) is the first
to develop. The shoot tip then penetrates the soil surface. A hook forms in the
hypocotyl of many eudicots, and growth pushes the hook above ground. The hook
straightens and pulls the cotyledons up, causing the tip to shoot skyward. The
coleoptile pushes up through the earth in monocots like maize and other grasses.
53
Talk to a doctor. Find out how twinning occurs. Look for any twins in your
neighborhood, or among your friends. Find out if the twins are identical or non-
identical. Also find out why identical twins are always of the same sex? If you know
of any story about twins, write it in your own words.
54
MODULE 8
This module was designed and written with you in mind. It is here to help you
compare and contrast the mechanisms by which plants and animals use for
circulation, gas exchange and immunity. The scope of this module permits it to be
used in many different learning situations. The language used recognizes the diverse
vocabulary level of students. The lessons are arranged to follow the standard
sequence of the course. But the order in which you read them can be changed to
correspond with the textbook you are now using.
The time it takes for diffusion to occur is related to the square of the distance.
It's only useful over short distances. Cells in small and/or thin animals can exchange
materials with the surrounding media directly. Most animals have a fluid-filled
circulatory system that allows cells to exchange resources with the environment.
55
Blood bathes the organs directly in
an open circulatory system in insects, other
arthropods, and most mollusks. There is no
differentiation between blood and
interstitial fluid in an open circulatory
system, and this general bodily fluid is
referred to as hemolymph. In contrary, blood
is confined to arteries in a closed circulatory
system and is different from the interstitial
fluid. Transporting circulatory fluids to
tissues and cells is more efficient in closed Types of Circulatory System
systems. Closed circulatory systems are Source: https://lh3.ggpht.com/-E_CZiP8ZX-
Y/URy3YTJZDpI/AAAAAAAAEFc/FawPDPGfxw8
seen in annelids, cephalopods, and /Open%252520and%252520Closed%252520circ
vertebrates. ulatory%252520system_thumb%25255B7%2525
5D.gif?imgmax=800
Organization of Vertebrate Circulatory
Systems
Single Circulation. Bony fishes, rays, and sharks have a two-chambered heart
with single circulation. Blood exiting the heart travels via two capillary beds before
returning to the heart in single circulation.
56
Oxygen-depleted blood passes through
the pulmonary circuit in reptiles and mammals
to be picked up by the lungs. Oxygen-deficient
blood passes through a pulmocutaneous circuit
in amphibians to pick up oxygen through the
lungs and skin. The systemic circuit receives
oxygen from oxygen-rich blood. In the organs,
double circulation maintains a higher blood
pressure than single circulation. A four-
chambered heart with two atria and two
ventricles is found in mammals and birds. Only
oxygen-rich blood is pumped and received by
the left side of the heart, while oxygen-poor
blood is pumped and received by the right side.
Endotherms, such as mammals and birds,
require more oxygen than ectotherms.
Mammalian Cardiovascular System
Lifted from Campbell Biology 11th Ed. Transport Mechanism in Plants
57
Pressure or Bulk Flow. The presence of a source cell and
a sink cell in the plant is maintained by pressure flow
or bulk flow. Photosynthesis takes place in a "source"
cell, whereas nutrients are needed in a "sink" cell.
Source cells are unmistakably leaf cells. Sucrose and
other compounds build up in the source, then flow
down (or up) to where they are needed due to their high
concentration. Sink cells are found in the growing
sections of plants, such as buds, flowers, fruits, and
root tips. Phloem tissues transport materials down and
up in this manner. Water can easily transfer from
xylem to phloem tissues because xylem is near to
phloem tissues. The functions of phloem and xylem
cells combine to carry materials up and down the plant Bulk Flow
body. Source:
https://organismalbio.biosci.gatech.edu/files/20
18/04/Figure_30_05_07.jpg
Gas Exchange in Animals
Source: https://sequencewiz.org/wp-
content/uploads/2020/08/Gas-exchange-in-human-body-
1024x853.png
58
Ventilation. The movement of the respiratory medium (air or water) over the
respiratory surface is referred to as this. Gill covers (operculum) are moved by bony
fish to allow water carrying oxygen to flow across the gill. The muscles of the thorax
are used to expand and contract the chest cavity and to transfer air in and out of the
lungs in humans.
59
Label the missing anatomical parts.
1 6
7
2
8
3
9
10
5
60
Lesson
8.2
IMMUNE SYSTEM
Antibody
Antibody is a protein made by our immune system that binds to a specific
target. Typically, these targets are pathogen components. Antigen is a substance or
component of a pathogen that activates the immune system. This response usually
results in the development of a specialized "antibody" for the target.
61
Two Aspects of Adaptive Response: Humeral and Cellular
1. Humeral Response. This due to the production of antibodies by B-cells.
• B cells are white blood cells that develop and mature in the bone marrow.
• B cells are activated when they encounter antigen in the lymph nodes.
• Activated B cells produce antibodies, proteins that recognize and bind to
specific parts of the pathogen, called antigens. Each B cell produces only one
antibody which recognizes only one kind of antigen (specificity)
Antibodies are of five major types; IgM, IgD, IgG, IgA, and IgE.
• IgM is the first antibody produced. It coats the pathogen and promotes
endocytosis by macrophages.
• IgG is a major antibody produced. It activates the other parts of the immune
response and leads to neutralization and destruction of pathogen.
• IgA is the important antibody for the mucosal immune response. It prevents
pathogens from crossing the epithelium and entering the blood stream.
• IgE activates mast cells and leads to the production of histamine, which is
why it is also associated with allergic reactions.
• IgD. (The role of this antibody is still unclear at this point.)
Antibodies work best against pathogens that can survive outside of the cell, such
as bacteria, fungus, and certain worms.
2. Cellular Response. The adaptive immune system is due to the production of T cells.
• T cells are white blood cells that are produced in the bone marrow and
mature in the thymus.
• T cells are activated when they encounter antigens in the lymph nodes.
• However, unlike B cells, T cells need to recognize an antigen in the
context of self-molecules called major histocompatibility complex (MHC)
molecules.
There are 3 major types of T cells: cytotoxic T cells, helper T cells and
regulatory T cells
62
Access the Department of Health’s Know Your Vaccine site page here
https://doh.gov.ph/vaccines/know-your-vaccines. Then accomplish the tasks
below.
1. Name the vaccines against COVID-19 that used the following as their
technology platform:
a. mRNA
b. non-replicating viral vector
c. inactivated virus
d. protein subunit
2. Is there any direct influence on the efficacy of the vaccine whether it used
mRNA, viral vector etc. as its technology platform? Explain your answer.
3. What happens when people get vaccinated by the following vaccines? How
does a person get antibodies upon vaccination of the specific vaccines below?
a. Oxford-AstraZeneca
b. Bharat BioTech
c. Moderna
63
MODULE 9
This module was designed and written with you in mind. It is here to help you
discover the Chemical and Nervous Signaling of Living Things. The scope of this
module permits it to be used in many different learning situations. The language
used recognizes the diverse vocabulary level of students. The lessons are arranged
to follow the standard sequence of the course. But the order in which you read them
can be changed to correspond with the module you are now using.
Lesson
Hormonal Control of Organisms
9.1
64
Evolution of Hormonal Control
Millions of years of evolution have resulted in the human endocrine system. It should
come as no surprise that the human endocrine system's endocrine glands and
accompanying hormones have parallels in the endocrine systems of more primitive
species. The emergence of the hypothalamic-pituitary-target organ axis, as well as
many other endocrine glands, throughout the evolution of fishes that preceded the
origin of terrestrial vertebrates, may be documented by investigating these species.
Hormones
65
c. steroids – estradiol, testosterone, cortisol, progesterone
d. prostaglandins – PGF2
Hormones in Plants
Gravity, light, touch, and seasonal variations are all sensed by plants. It can
be observed how a house plant bends toward a bright window, for example. Plants
can detect the source of light and grow toward it. Plants, according to scientists, can
respond to "stimuli," or something that causes a response (typically in the
environment). Light, for example, is the stimulus, and the plant's movement toward
it is the "reaction." Hormones are chemical messengers that aid organisms, including
plants, in responding to stimuli in their surroundings. Plant cells must be able to
interact with one another in order to respond to their surroundings.
Five different types of plant hormones are involved in the main responses of plants,
and they each have different functions
Hormone Function
66
Complete the table below
Lesson
Nervous Control
9.2
67
Comparative morphology
68
THE NEURON
The portion of the nervous system composed of the brain and spinal cord in
vertebrates. The division of the vertebrate nervous system comprising the brain and
spinal cord is known as the central nervous system. In general, the central nervous
system is responsible for the processing of information that is received from various
parts of the vertebrate body; it receives information from sensory neurons and
responds via motor neurons (the sensory and motor neurons are components of the
peripheral nervous system). The brain is enclosed in the skull, and the spinal cord
is enclosed within the spinal canal of the vertebral column. The brain and spinal
cord are intimately covered by membranes called meninges and are bathed in an
extracellular fluid called cerebrospinal fluid. Approximately 90% of the cells of the
central nervous system are glial cells. These cells support (both physically and
metabolically) the other 10% of the cells, which are the nerve cells or neurons.
Although the glial cells are much more numerous than neurons, the glial cells are
also much smaller and do not directly participate in the propagation and integration
of information.
69
THE PERIPHERAL NERVOUS SYSTEM
The nerves that branch out from the brain and spinal cord make up the
Peripheral nervous system. The communication network between the CNS and the
body parts is formed by these nerves. The somatic nervous system and the
autonomic nervous system are two subsystems of the peripheral nervous system.
The somatic nervous system is made up of nerves that run from the brain to the skin
and muscles, and it plays a role in conscious behaviors. Nerves that connect the CNS
to visceral organs like the heart, stomach, and intestines make up the autonomic
nervous system. It transmits information for unconscious activities.
70
Sensory Processes
Sensory receptors are either specialized cells associated with sensory neurons or the
specialized ends of sensory neurons that are a part of the peripheral nervous system,
and they are used to receive information about the environment (internal or external).
Each sensory receptor is modified for the type of stimulus it detects. For example,
neither gustatory receptors nor auditory receptors are sensitive to light. Each sensory
receptor is responsive to stimuli within a specific region in space, which is known as
that receptor’s receptive field. The most fundamental function of a sensory system is
the translation of a sensory signal to an electrical signal in the nervous system.
Somatosensation
Somatosensation includes all sensation received from the skin and mucous
membranes, as well as from the limbs and joints. Somatosensation occurs all over
the exterior of the body and at some interior locations as well, and a variety of
receptor types, embedded in the skin and mucous membranes, play a role.
There are several types of specialized sensory receptors. Rapidly adapting free
nerve endings detect nociception, hot and cold, and light touch. Slowly adapting,
encapsulated Merkel’s disks are found in fingertips and lips, and respond to light
touch. Meissner’s corpuscles, found in glabrous skin, are rapidly adapting,
encapsulated receptors that detect touch, low-frequency vibration, and flutter.
Ruffini endings are slowly adapting, encapsulated receptors that detect skin stretch,
joint activity, and warmth. Hair receptors are rapidly adapting nerve endings
wrapped around the base of hair follicles that detect hair movement and skin
deflection. Finally, Pacinian corpuscles are encapsulated, rapidly adapting receptors
that detect transient pressure and high-frequency vibration.
Taste and Smell
There are five primary tastes in humans: sweet, sour, bitter, salty, and umami.
Each taste has its own receptor type that responds only to that taste. Tastants enter
the body and are dissolved in saliva. Taste cells are located within taste buds, which
are found on three of the four types of papillae in the mouth.
71
acceleration and angular acceleration and deceleration. Both the auditory system
and vestibular system use hair cells as their receptors.
Auditory stimuli are sound waves. The sound wave energy reaches the outer
ear (pinna, canal, tympanum), and vibrations of the tympanum send the energy to
the middle ear. The middle ear bones shift and the stapes transfers mechanical
energy to the oval window of the fluid-filled inner ear cochlea. Once in the cochlea,
the energy causes the basilar membrane to flex, thereby bending the stereocilia on
receptor hair cells. This activates the receptors, which send their auditory neural
signals to the brain.
The vestibular system has five parts that work together to provide the sense
of direction, thus helping to maintain balance. The utricle and saccule measure head
orientation: their calcium carbonate crystals shift when the head is tilted, thereby
activating hair cells. The semicircular canals work similarly, such that when the head
is turned, the fluid in the canals bends stereocilia on hair cells. The vestibular hair
cells also send signals to the thalamus and to somatosensory cortex, but also to the
cerebellum, the structure above the brainstem that plays a large role in timing and
coordination of movement.
Vision
Vision is the only photo responsive sense. Visible light travels in waves and is
a very small slice of the electromagnetic radiation spectrum. Light waves differ based
on their frequency (wavelength = hue) and amplitude (intensity = brightness).
In the vertebrate retina, there are two types of light receptors (photoreceptors):
cones and rods. Cones, which are the source of color vision, exist in three forms—L,
M, and S—and they are differentially sensitive to different wavelengths. Cones are
located in the retina, along with the dim-light, achromatic receptors (rods). Cones
are found in the fovea, the central region of the retina, whereas rods are found in the
peripheral regions of the retina.
Visual signals travel from the eye over the axons of retinal ganglion cells,
which make up the optic nerves. Ganglion cells come in several versions. Some
ganglion cell axons carry information on form, movement, depth, and brightness,
while other axons carry information on color and fine detail. Visual information is
sent to the superior colliculi in the midbrain, where coordination of eye movements
and integration of auditory information takes place. Visual information is also sent
to the suprachiasmatic nucleus (SCN) of the hypothalamus, which plays a role in the
circadian cycle.
72
Label the parts of the Neuron
below
Axon
Myelin sheath
Cell body
Dendrites
Muscle fibers
Medical professionals are very familiar with the 12 cranial nerves responsible for
both sense and motility of the face and neck. Research on the cranial nerves and
memorize their locations on your face.
73
MODULE 10
This module was designed and written with you in mind. It is here to help you
master the concept in Nutrition and Body Fluid Regulation. The scope of this module
permits it to be used in many different learning situations. The language used
recognizes the diverse vocabulary level of students. The lessons are arranged to follow
the standard sequence of the course. But the order in which you read them can be
changed to correspond with the textbook you are now using.
The module has one lesson, namely:
• Lesson 10– Nutrition among organisms
Lesson
Nutrition among organisms
10
74
Invertebrate Digestive Systems
75
Avian
Ruminants
enzymes.
76
Digestive System Processes
Digestion begins with ingestion, where the food is taken in the mouth.
Digestion and absorption take place in a series of steps with special enzymes playing
important roles in digesting carbohydrates, proteins, and lipids. Elimination
describes removal of undigested food contents and waste products from the body.
While most absorption occurs in the small intestines, the large intestine is
responsible for the final removal of water that remains after the absorptive process
of the small intestines. The cells that line the large intestine absorb some vitamins
as well as any leftover salts and water. The large intestine (colon) is also where feces
is formed.
The brain and the endocrine system control digestive processes. The brain controls
the responses of hunger and satiety. The endocrine system controls the release of
hormones and enzymes required for digestion of food in the digestive tract.
https://openstax.org/details/books/Biology 2e - OpenStax
77
Trace the pathway of Digestion, from the mouth up to the anus, by creating a
flowchart.
Mouth Anus
78
MODULE 11
This module was designed and written with you in mind. It is here to help you
explain Homeostasis and Feedback Mechanism. The scope of this module permits it
to be used in many different learning situations. The language used recognizes the
diverse vocabulary level of students. The lessons are arranged to follow the standard
sequence of the course. But the order in which you read them can be changed to
correspond with the module you are now using.
1. Describe homeostasis;
2. Explain the importance of homeostasis for the normal body function;
3. Distinguished between positive-feedback and negative-feedback mechanism
Human anatomy and physiology are the study of the structure and function
of the human body. The human body has many intricate parts with coordinated
functions maintained by a complex system of checks and balances. The coordinated
function of all the parts of the human body allows us to detect stimuli, respond to
stimuli, and perform many other actions. Knowing human anatomy and physiology
also provides the basis for understanding diseases. The study of human anatomy
and physiology is important for students who plan to take a career in the health
sciences because health professionals need a comprehensive knowledge of structure
and function to perform their duties. Understanding anatomy and physiology
prepares us to evaluate the health condition and recommended treatments for
certain disease, ailment, and disorder.
79
Homeostasis and Feedback Mechanisms
• Homeostasis is the
tendency of biological
systems to maintain
relatively constant
conditions in the internal
environment while
continuously interacting
with and adjusting to
changes originating
within or outside the
system. It is the
maintenance of a
constant internal
environment in response
to changes in external and internal environment.
• Stressors are changes in the internal and the external environment that
affect the normal conditions of the body.
1. Structural: the animal or plant has physical features which help its survival in
an otherwise hostile environment.
2. Functional: the metabolism of the animal or plant can adjust to changes in
conditions as they are detected.
3. Behavioral: the actions and interactions of the individual, either alone or with
others, help it to survive in its environment.
80
Feedback Mechanisms
2. Control center. This sets range of what the maintained balance in the body
should be. It evaluates the input it receives from the receptors and generates
command outputs when needed. output is also in the form of a nerve impulse
or chemical system.
3. Effector. This receives outputs from the control center and produces a
response or effect that changes the condition. nearly every body organ and
tissue can behave an effector.
81
Example:
• Blood glucose concentrations rise after a sugary meal (the stimulus). The
hormone insulin is released, and it speeds up the transport of glucose out of
the blood and into selected tissues (the response). Blood glucose
concentrations decrease (thus decreasing the original stimulus).
https://openstax.org/details/books/Biology 2e - OpenStax
Example:
• A baby begins to suckle her mother's nipple and a few drops of milk are
released (the stimulus). This encourages the baby and releases a hormone in
the mother which further stimulates the release of milk (the response). The
hungry baby continues to suckle, stimulating more milk release until she
stops.
•
https://openstax.org/details/books/Biology 2e - OpenStax
82
Directions: Fill in the box below of the correct answer from the given feedback
mechanism.
Directions. Read the situation in the box. Fill-in the missing concept below to show
what occurs in the body to maintain temperature homeostasis.
83
and how does this affect body
temperature?)
84
MODULE 12
This module was designed and written with you in mind. It is here to help you
understand Homeostasis in the Body. The scope of this module permits it to be used
in many different learning situations. The language used recognizes the diverse
vocabulary level of students. The lessons are arranged to follow the standard
sequence of the course. But the order in which you read them can be changed to
correspond with the module you are now using.
Similarly, how do the brain and the other body systems work together to
maintain homeostasis? The circulatory system provides your brain with a constant
supply of oxygen-rich blood while your brain regulates your heart rate and blood
pressure. Meanwhile, your bones are busy making new blood cells. Working together,
these systems maintain internal stability and balance, otherwise known
as homeostasis.
85
All your body systems must work together to keep you healthy. Your bones
and muscles work together to support and move your body. Your
respiratory system takes in oxygen from the air. Your circulatory system carries
oxygen, water, and nutrients to cells throughout your body.
Homeostasis is the process by which the body regulates its internal
environment for chemical and biological processes to occur. Some of the more
important variables that the body needs to control include temperature, and the
levels of blood sugar, oxygen, and carbon dioxide. Several organs are involved in
homeostasis, and these include the lungs, pancreas, kidneys, and skin.
Lungs and Respiration. Respiration is a process that uses glucose to create
energy. It is the most important reaction taking place within the human body.
Critical to the respiration process is the regulation of oxygen levels within the blood,
which is carried out by the lungs. In addition to energy, respiration creates carbon
dioxide from the broken-down glucose. The level of carbon dioxide in the
bloodstream is an indirect measure of blood oxygen levels. Special cells in the brain
detect the carbon dioxide level in the blood, and if it is too high, the brain sends
nerve impulses to stimulate the muscles that control breathing. The lungs then fill
with air faster, increasing the amount of oxygen in the bloodstream. If carbon
dioxide levels within the blood are low, the brain cells do not stimulate nerve cells,
reducing the rate of breathing.
Pancreas and Blood Glucose The regulation of blood-glucose levels is
essential for the survival of the human body. The pancreas, a small glandular organ
located close to the stomach, has several functions. One of the most important is
the regulation of blood-glucose levels. The pancreas contains special cells known
as the Islets of Langerhans that detect blood-glucose levels. If the blood-glucose
levels are too high, the cells release the hormone insulin to stimulate liver, muscle,
and fat cells to absorb glucose from the blood and store it as glycogen or starch.
When blood sugar levels are too low, the cells release another hormone called
glucagon. Glucagon acts on the liver, muscle and fat cells and stimulates them to
convert glycogen to glucose, releasing it into the blood.
https://openstax.org/details/books/Biology 2e - OpenStax
86
Kidneys and Water Regulation. Kidneys regulate the amount of water
present in the human body. When the level of water in the bloodstream becomes
too low, the hypothalamus in the brain releases a large quantity of the chemical
anti-diuretic hormone, ADH. ADH travels through the blood and stimulates the
kidneys to open water channels within its tubule walls, allowing water to diffuse
back into nearby blood vessels and reducing the amount of water in urine. When
too much water is present in the blood, the hypothalamus releases smaller amounts
of ADH. This causes the kidneys to close water channels within the tubule walls,
increasing the amount of water in urine.
Directions: Fill in the blanks with the correct term for the word box
87
Maintaining Homeostasis
Directions: Fill in the columns of the appropriate answer from the given choices
below.
Hormone
Organ secreted/Response to Function
maintain homeostasis
Pancreas
Skin and blood vessel
Kidney
88
Quarter 2 or Quarter 4.
Directions: Choose the letter of the best answer. Write the chosen letter on a separate
sheet of paper.
1. Which of the following respiratory systems is not closely associated with a blood
supply?
3. The driving force for diffusion of oxygen across the cells of a respiratory organ is:
A. The difference in partial pressure of oxygen in the environment and the blood.
B. The humidity.
C. The partial pressure of carbon dioxide in the blood.
D. The temperature
A. Endocrine glands are ductless and exocrine glands release secretions at the
body's surface or into ducts.
B. Endocrine glands release hormones, whereas exocrine glands release waste.
C. Endocrine glands are formed by epithelial tissue, but exocrine glands are
primarily connective tissue.
D. Endocrine glands are all interconnected, whereas exocrine glands act
completely independently.
5. Which of the following hormones are responsible for the "fight-or-flight" response?
89
6. Which of the following macronutrients are processed chemically in the mouth?
A. Fats
B. Lipids
C. Protein
D. Carbohydrates
8. Which system sends electrical signal that help control body’s responses to
internal and external changes?
A. Nervous
B. Reproductive
C. Endocrine
D. Integumentary
A. Vasoconstriction, shivering
B. Vasodilation, shivering
C. Vasoconstriction, sweating
D. Vasodilation, sweating
10. What hormone is produced in the pancreas that raises blood sugar?
A. Insulin
B. Ketones
C. Glucagon
D. Glucose
90
91
What’s More (Lesson 5. Deer
2.1) 6.Layer A, Glass Bottle or What’s More (Lesson
1.Spear point Ceramic Doll 2.2)
2.People who live in the 7.By a spear, A Native Answers may vary
house American
3.More recent 8.Deer bone What I Can Do
4.Yes, because of the 9.Fish bones Answers may vary
spear point; No, there are
no artifacts or Yes, there
is nothing left from the
people.
Module 2
What’s More (Lesson What’s More (Lesson 10. allergenic
1.1) 1.2) 11. environment
1. Identify the gene of 1. nutrients 12. chemically farmed
interest 2. plant diseases 13. fossil fuel
2. Isolate the gene of 3. seeds 14. greenhouse gases
interest 4. herbicides 15. herbicides
3. Isolate the plasmid 5. biodegradable 16. food supply
4. Cut the DNA of 6. uncontrolled 17. allocation of
interest and the plasmid 7. mutations resources
with restriction enzymes 8. crop performance 18. safety studies
5. Combine the gene of 9. nutritional content
interest and to the
plasmid using DNA ligase
Module 1
What I know (Q1 ASSESSMENT (Q1 What I know Q2 or ASSESSMENT (Q2
or Q3) or Q3) Q4) or Q4)
1. C 6. D 1. B 6. B 1.D 6. A 1. B 6. D
2. C 7. B 2. B 7. D 2. D 7. D 2. B 7.D
3. C 8. A 3. D 8. D 3. C 8. C 3. A 8.A
4. A 9. D 4. D 9. A 4. C 9. A 4. A 9.D
5. C 10. C 5. C 10. D 5. D 10. A 5. A 10. C
92
What More What I Can Do
Act. 1 Identify Pig Chicken Dogfish Drosophila Wheat Yeast
1. 6 the amino Val Ile Val Leu Asn Ser
2. 7 acid Gln Val Val Val Pro Ala
different Ala Gln Gln Gln Asp Lys
3. They from Ala Arg Ala Ala
could still Human Asn Ala Ala Thr
make the Ala Lys Leu
same Thr Lys
insulin Ala Thr
Asp Arg
protein if Ala Glu
the Leu
sequences Total 3 3 5 6 10 11
coded for Number of
the same amino
acid
amino
acid as
those in
insulin
protein
Module 5
What’s More (Lesson 4.1) What’s more (Lesson 4.2)
ADAPTIVE RADIATION.
Explanations may vary
What I can do
Answers may vary
Module 4
What’s more (lesson 3.1) What’s More (lesson 3.2)
Sample only. Answers Answers May Vary
may
REPRODU
CTIVE
vary
FITNESS
NATURAL What I can do
SPECIATIO
SELECTIO
N
N Answers may vary
EVOLUT
ION
RADIATIVE
EVOLUTIO ENVIRON
N MENT
COEVOLU
TION
Module 3
93
What’s More (Lesson What’s More (Lesson What I Can Do
8.1) 8.2) Answers may vary
1. Aorta 1. B cells
2. Vena cava 2. In the bone marrow
3. Right atrium 3. IgE
4. Semi-lunar valve 4. This person becomes
5. Right ventricle very susceptible to
6. Pulmonary artery diseases. They cannot
7. Semi-lunar valve effectively combat
8. Pulmonary vein pathogens and can
9. Left atrium eventually die from
10. Left ventricle even the mildest
infections.
Module 8
What’s More (Lesson What’s More (Lesson
7.1) 7.2)
Asexual Sexual Answers may vary
DNA DNA
One parent Male and What I Can Do
Unique female Answers may vary
Spores Traits
Uniform Egg and
Traits sperm
Module 7
G A A M I N O A C I D A I S K
E B L Q V Z D I N S Z B J E I
N C M R W A E J O T A C K Q N
E V O L U T I O N U E D L U G
G D N S X B F K P V A E M E D
H E O T Y C G L Q W H F N N O
I T A X O N O M Y X C G O C M
J F P U C Y T O C H R O M E Q
P H Y L U M H M R Y A H P S R
K C L A S S I F I C A T I O N
What I can do
What’s More
Organi Kingdo Phylu Class Order Family Genus Specie
sm m m s
Lion Animali Chorda Mamm Carnivo Felidae Panther leo
a ta als ra a
Earthw Animali Annelid Clitellat Lumbri Lumbri Lumbric terrestri
orm a a a culida cidae us s
Parame Protista Cilioph Oligohy Penicul Parame Parame aurelia
cium ora menop ida ciidae cium
horea
Module 6
94
What More What I Can Do
Act. 1 Expressing feedback Normal range body temp: 36.4°C to
mechanism 37.2°C
Stimulus
Rise in body temperature Stimulus: Change or decrease in the
Receptor normal body temperature
Skin and brain sense change
Signal Sensor: skin and nerve cells sense the
Command from the brain change in the body temperature
Response
Skin makes sweat and blood vessels Integrating center: Hypothalamus
dilate
Effector(s): muscles and blood vessels
Response: Muscles shiver to generate
heat and the constriction of the blood
vessels helps the body retain heat.
Module 11
What’s more 10 What I can do
Answers may vary
Module 10
Module 9
95
What More
Act. 1 Paragraph What I Can Do
completion
Some people suffer from a Hormone
disease called diabetes. Organ secreted/Response to Function
They do not produce maintain homeostasis
enough of a hormone Pancreas insulin Regulate
called insulin from the blood sugar
organ in the body called level
pancreas. Insulin controls Skin and Trigger Regulate
the blood sugar levels. blood vasodilation/constriction body
Diabetics have to be vessel of blood vessels temperature
careful that they do not Kidney ADH Regulate
eat too much sweet food. water
They may also need to balance
inject themselves with the
hormone insulin to help
control their blood sugar
Module 12
References
96
Department of Health Know Your Vaccine. Retrieved January 6, 2022
https://doh.gov.ph/vaccines/know-your-vaccines
https://training.seer.cancer.gov/anatomy/nervous/organization/pns.html#:~:text=
The%20peripheral%20nervous%20system%20consists,and%20the%20autono
mic%20nervous%20system.
https://organismalbio.biosci.gatech.edu/nutrition-transport-and-
homeostasis/acquisition-of-nutrients-in-animals/
Homeostasis in the body. (2022). TreeHozz. USA. Retrieved January 31, 2022 from
https://treehozz.com/how-the-body-systems-work-together-to-maintain-
homeostasis
Feedback mechanism. (2022). Online Biology Notes. USA. Retrieved January 17,
2002 from https://www.onlinebiologynotes.com/feedback-mechanism-
negative-feedback-and-positive-feedback/system
VanPutte, C. L., Regan, J. L., & Russo, A. F. (2017). Seeley's Anatomy & Physiology.
McGraw-Hill.
First Aid for Diabetic Ketoacidosis. (2022). FIRST AID for free. USA. Retieved
February 8, 2022 from https://www.firstaidforfree.com/first-aid-for-
diabetic- ketoacidosis-dka/
97
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