CS001 Project Specification 1.

XML stylesheet ver. 1.1

XML stylesheet ver. 1.1......................................................................................................................................................... 1
General rules......................................................................................................................................................................... 2
Front matter ......................................................................................................................................................................... 2
Document, journal and publisher information ................................................................................................................. 2
Article information............................................................................................................................................................ 3
Authors/contributors ........................................................................................................................................................ 4
Author (standard western style name) ......................................................................................................................... 4
Author with degree (AH)............................................................................................................................................... 4
Single name author ....................................................................................................................................................... 4
Author collab – group as author ................................................................................................................................... 4
Handling editor ............................................................................................................................................................. 4
Author notes or statements ............................................................................................................................................. 4
Corresponding author ................................................................................................................................................... 4
Equal contrib (standard statement) [place in author section – uses afn]..................................................................... 4
Any other author footnote [place in back matter – uses FN] ....................................................................................... 4
Author biographies ........................................................................................................................................................... 5
Affiliations ......................................................................................................................................................................... 5
Title [NOTE: no mml permitted in title tags] and title footnotes ..................................................................................... 5
Article dates and vol/issue info ........................................................................................................................................ 5
Copyright information ...................................................................................................................................................... 6
Open Access .................................................................................................................................................................. 6
Not OA .......................................................................................................................................................................... 6
Funding information [data that get sent to aggregators but is not displayed on website] .............................................. 6
Abstract............................................................................................................................................................................. 7
With subheadings and cultural warning (if required – remove grey if not needed) .................................................... 7
Without subheadings but with warning text (if required – remove grey if not needed) ............................................. 7
TOC abstract with warning text (if required – remove grey if not needed) and TOC image ............................................ 7
Keywords .......................................................................................................................................................................... 8
Body ...................................................................................................................................................................................... 8
Heading level 1 ................................................................................................................................................................. 8
Lists ................................................................................................................................................................................... 9
Tables .............................................................................................................................................................................. 10
Figures............................................................................................................................................................................. 11
Equations ........................................................................................................................................................................ 11
Display......................................................................................................................................................................... 11
Inline ........................................................................................................................................................................... 12

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CS001 Project Specification 1.1

Boxes [can now include figures, tables, mml and lists as required when tagged as below] .......................................... 13
Quotes ............................................................................................................................................................................ 14
Taxonomy [sec-type="taxonomy" has specific formatting rules] ................................................................................... 14
Nomenclature ................................................................................................................................................................. 16
Back matter......................................................................................................................................................................... 17
Author statements .......................................................................................................................................................... 17
Acknowledgements ........................................................................................................................................................ 17
References ...................................................................................................................................................................... 17
Journal (element) citations with page range .............................................................................................................. 17
Journal (element) citation with elocation ID (article number) ................................................................................... 17
Journal (element) citation (with URL instead of DOI) ................................................................................................. 17
Mixed citations – Book chapter (with doi) Harvard .................................................................................................... 18
Mixed citations – Web (with URL) Harvard ................................................................................................................ 18
Mixed citations – Book (with URL) Harvard ................................................................................................................ 18
Mixed citations – Conference (with URL) Harvard ..................................................................................................... 18
Mixed citations – Book Vancouver ............................................................................................................................. 18
Mixed citations – Web (with URL) Vancouver ............................................................................................................ 18
Appendices ..................................................................................................................................................................... 18
Footnotes ........................................................................................................................................................................ 19

This document contains all the elements we support from the JATS1.3 DTD.

General rules

• Order of content in the XML must match the order in the PDF
• All id="X1" attributes must be in order within the XML from the top down
• Reference list must be in the correct order so id= order is maintained
• <label> tags cannot contain formatting

Front matter

Document, journal and publisher information

<?xml version="1.0" encoding="utf-8"?>c
<!DOCTYPE article SYSTEM "https://jats.nlm.nih.gov/archiving/1.1/JATS-archivearticle1.dtd">
<article article-type="research-article" dtd-version="1.3" xml:lang="EN"
xmlns:ali="http://www.niso.org/schemas/ali/1.0/" xmlns:mml="http://www.w3.org/1998/Math/MathML"
xmlns:xlink="http://www.w3.org/1999/xlink">

CS001 project <article-type> supported tags for articles – this will be what gets sent to the aggregators [a full mapping
document will be provided]

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CS001 Project Specification 1.1

research-article all variants of research paper, including research notes, communications, etc.
review-article review type articles, including perspectives, viewpoints and named reviews
editorial editorials, forewords, introductions etc.
letter letter to editors, vertical transmission (MA)
article-commentary comment
reply response
book-review book review
news obituaries, news and views (PC), focus paper (CH)
abstract the article is an abstract only (such as IETS abstracts)

<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">XX</journal-id>
<journal-title-group>
<journal-title>Journal Title</journal-title>
<abbrev-journal-title abbrev-type="pubmed">J. Abbrev.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="ppub">XXXX-XXXX</issn>
<issn pub-type="epub">XXXX-XXXX</issn>
<publisher>
<publisher-name>CSIRO Publishing</publisher-name>
<publisher-loc>
<addr-line content-type="street">36 Gardiner Road</addr-line>
<addr-line content-type="suburb">Clayton</addr-line>
<addr-line content-type="postcode">3168</addr-line>
<addr-line content-type="state">Victoria</addr-line>
<country>Australia</country>
</publisher-loc>
</publisher>
</journal-meta>

Article information
<article-meta>
<article-id pub-id-type="publisher-id">XXXXXXX</article-id>
<article-id pub-id-type="doi">10.1071/XXXXXXX</article-id>
<article-categories>
<subj-group subj-group-type="paper-type"><subject>Research Paper</subject></subj-group>
<subj-group subj-group-type="series"><subject>Turner Review No. 26</subject></subj-group>
<subj-group subj-group-type="collection"><subject>Name of special issue/research front here</subject></subj-group>
</article-categories>

CS001 project <subj-group-type> tags for articles, these will be used to drive the paper type display on our website and
will match what is shown on the PDF [NOTE they may be different to the ‘article-type’ above]
paper-type By paper type: Research Paper, Review, etc. All types permitted as values
collection To indicate if paper is part of a special collection of papers (i.e. special issue)
series To indicate if paper is part of a known named paper series (i.e. Turner Review)

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CS001 Project Specification 1.1

Authors/contributors
<contrib-group>

Author (standard western style name)

<contrib contrib-type="author" equal-contrib="yes"><contrib-id contrib-id-type="orcid"

authenticated="true">https://orcid.org/XXXX-XXXX-XXXX-XXXX</contrib-
id><name><surname>Surname</surname><given-names initials="N.">Name</given-names></name><xref ref-
type="aff" rid="aff1">^A</xref><xref ref-type="fn" rid="afn1">^&#x00023;</xref><xref ref-
type="corresp" rid="cor1">^&#x002A;</xref></contrib>

Author with degree (AH)

<contrib contrib-type="author"><contrib-id contrib-id-type="orcid" authenticated="true">https://orcid.org/XXXX-

XXXX-XXXX-XXXX</contrib-id><name><surname>Surname</surname><given-names initials="N.">Name</given-
names></name><degrees>PhD</degrees><xref ref-type="aff" rid="aff1">^A</xref></xref></contrib>

Single name author

<contrib contrib-type="author"><contrib-id contrib-id-type="orcid" authenticated="true"> https://orcid.org/XXXX-

XXXX-XXXX-XXXX </contrib-id><name><surname>Singlename</surname><given-names> </given-names></name><xref
ref-type="aff" rid="aff2">^B</xref><xref ref-type="fn" rid="FN1">&#x00023;</xref></contrib>

Author collab – group as author

<contrib contrib-type="author"><collab collab-type="group">Group Name</collab><xref ref-type="aff"

rid="aff2">^B</xref></contrib>

Handling editor

<contrib contrib-type="editor"><role>Handling Editor</role><name><surname>Surname</surname><given-

names>Name</given-names></name></contrib>
</contrib-group>

Author notes or statements

Corresponding author

<author-notes>
<corresp id="cor1"><label>^&#x002A;</label><bold>Correspondence to:</bold> Name Surname Full
author affiliation Email: <email>email@email.com</email></corresp>
</author-notes>

Equal contrib (standard statement) [place in author section – uses afn]

<fn id="afn1"><label>^&#x00023;</label><p>These authors contributed equally to this paper.</p></fn>

Any other author footnote [place in back matter – uses FN]

<fn-group><fn id="FN1" symbol="&#x00023;"><p>These authors contributed equally to this work and should be
considered co-first authors.</p></fn></fn-group>

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CS001 Project Specification 1.1

Author biographies
<bio content-type="Author Name" xlink:href="XXXXXXX_B1.gif" id="bio1"><p><bold>Author Name</bold> bio text bio
text bio text bio text bio text bio text bio text bio text bio text bio text bio text bio text bio text bio text bio text bio text
bio text bio text bio text bio text bio text bio text bio text bio text.</p></bio>

Affiliations
<aff id="aff1"><institution content-type="university">The University of Western Australia, School of Agriculture &amp;
Environment</institution>, <addr-line>35 Stirling Highway, Crawley</addr-line>, <city>Perth</city>,
<state>WA</state> <postal-code>6009</postal-code>, <country>Australia</country>.</aff>
</contrib-group>

Title [NOTE: no mml permitted in title tags] and title footnotes

<title-group>
<article-title>Here is the article title<xref ref-type="fn" rid="FN1">^&#x2020;</xref></article-title>
<alt-title alt-title-type="running-head">N. Surname et al.</alt-title>
</title-group>
BACK MATTER TEXT FOR TITLE FOOTNOTE
<fn-group>
<fn id="FN1" symbol="&#x2020;"><p>Preprint version available at <ext-link ext-link-type="uri"
xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="https://doi.org/10.21203/rs.3.rs-
1267830/v1">https://doi.org/10.21203/rs.3.rs-1267830/v1</ext-link></p></fn>
</fn-group>

Article dates and vol/issue info

<pub-date pub-type="epub"><day>XX</day><month>XXX</month><year>XXXX</year></pub-date>
<volume>XX</volume>
<issue>XX</issue>
<fpage>XX</fpage>
<lpage>XX</lpage>
<history>
<date date-type="received"><day>XX</day><month>XXX</month><year>XXXX</year><string-date>Received XX XXX
XXXX</string-date></date>
<date date-type="accepted"><day>XX</day><month>XXX</month><year>XXXX</year><string-date>Accepted XX XXX
XXXX </string-date></date>
<date date-type="online"><day>XX</day><month>XXX</month><year>XXXX</year><string-date>Published XX XXX
XXXX </string-date></date>
</history>

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CS001 Project Specification 1.1

Copyright information
Open Access

<permissions>
<copyright-statement>&#x00A9; 2023 The Author(s) (or their employer(s)). Published by CSIRO Publishing. This is an
open access article distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0
International License (<ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink"
xlink:href="https://creativecommons.org/licenses/by-nc-nd/4.0/">CC BY-NC-ND</ext-link>)</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>The Author(s) (or their employer(s)).</copyright-holder>
<license>
<ali:license_ref start_date="YYYY-MM-DD">https://creativecommons.org/licenses/by/nc/nd/4.0/</ali:license_ref>
<license-p>CC BY-NC-ND</license-p>
</license>
</permissions>

Not OA

<permissions>
<copyright-statement>&#x00A9; 2023 The Author(s) (or their employer(s)). Published by CSIRO Publishing.</copyright-
statement>
<copyright-year>2023</copyright-year>
<copyright-holder>The Author(s) (or their employer(s)).</copyright-holder>
</permissions>

Funding information [data that get sent to aggregators but is not displayed on website]
<funding-group>
<award-group award-type="grant" id="AG1">
<funding-source id="GS1">
<institution-wrap>
<institution>Department of Environment, Land, Water and Planning, State Government of Victoria</institution>
<institution-id institution-id-type="open-funder-registry">http://dx.doi.org/10.13039/100009675</institution-id>
</institution-wrap>
</funding-source>
<award-id>ABCDE12345</award-id>
<award-id>ABCDE67891</award-id>
</award-group>
</funding-group>
</article-meta>

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CS001 Project Specification 1.1

Abstract
With subheadings and cultural warning (if required – remove grey if not needed)

<abstract>
<sec>
<title>Warning</title>
<p><i>Warning text warning text warning text</i></p>
</sec><sec>
<title>Context</title>
<p>Abstract text abstract text abstract text.</p>
</sec>
<sec>
<title>Methods</title>
<p>Abstract text abstract text abstract text.</p>
</sec>
<sec>
<title>Key results</title>
<p>Abstract text abstract text abstract text.</p>
</sec>
<sec>
<title>Conclusions</title>
<p>Abstract text abstract text abstract text.</p>
</sec>
<sec>
<title>Implications</title>
<p>Abstract text abstract text abstract text.</p>
</sec>
</abstract>

Without subheadings but with warning text (if required – remove grey if not needed)

<abstract>
<sec>
<title>Warning</title>
<p><i>Warning text warning text warning text</i></p>
</sec><sec>
<p>Abstract text abstract text abstract text.</p>
</sec>
</abstract>

TOC abstract with warning text (if required – remove grey if not needed) and TOC image
<abstract abstract-type="toc">
<fig id="toc" fig-type="graphical-abstract" position="float">
<graphic xlink:href="XXXXXXX_TOC.gif">
<alt-text>Alt text less than 120 characters</alt-text>
</graphic>
</fig>

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CS001 Project Specification 1.1

<p><bold>Warning:</bold> <italic> Warning text warning text warning text.</italic></p>

<p>Short summary text summary text summary text. Photograph by Name Surname.</p>
</abstract>

Keywords
<kwd-group kwd-group-type="author" xml:lang="EN">
<title>Keywords:</title>
<kwd>citrate soluble</kwd>
<kwd>eutrophication</kwd>
<kwd>fertiliser</kwd>
<kwd>leaching</kwd>
<kwd>pasture</kwd>
<kwd>phosphorus</kwd>
<kwd>retention</kwd>
<kwd>sand</kwd>
<kwd>water soluble</kwd>
</kwd-group>

Body
<body>

Heading level 1
<sec-type> tags for H1
conclusions Conclusions/Comment
discussion Discussion/Interpretation
discussion|conclusions Discussion and conclusions
intro Introduction/Synopsis
materials Materials
methods Methods/Methodology/Procedures
materials|methods Materials and methods
results Results/Statement of Findings
results|discussion Results and discussion
supplementary-material Supplementary materials
taxonomy Taxonomy
other Any other H1
<sec disp-level="1" sec-type="intro">
<title>Introduction</title>
<p>Paragraph text</p>
<sec disp-level="2">
<title>Heading level 2</title>
<p>Paragraph text</p>

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CS001 Project Specification 1.1

<sec disp-level="3">
<title>Heading level 3</title>
<p>Paragraph text</p>
<sec disp-level="4">
<title>Heading level 4</title>
<p>Paragraph text</p>
<sec disp-level="5">
<title>Heading level 5</title>
<p>Paragraph text</p>
</sec></sec></sec></sec></sec>

Lists
Permitted <list-type> tags
order Ordered list. Prefix character is a number.
bullet Unordered or bulleted list. Prefix character is a bullet.
alpha-lower Ordered list. Prefix character is a lowercase alphabetical character.
alpha-upper Ordered list. Prefix character is an uppercase alphabetical character.
roman-lower Ordered list. Prefix character is a lowercase roman numeral.
roman-upper Ordered list. Prefix character is an uppercase roman numeral.
simple Simple or plain list (no prefix character before each item).

<list id="L1" list-type="order">

<list-item><p>Numbered list text</p></list-item>
<list-item><p>Numbered list text</p></list-item>
<list-item><p>Here is a sub list with a different list style. Note placement of paragraph tags:
<list id="L2" list-type="bullet">
<list-item><p>Sub-list text</p></list-item>
<list-item><p> Sub-list text </p></list-item>
</list>
</p>
</list-item>
<list-item><p>Back to original numbered list text</p></list-item>
</list>
<p>And one more list for testing</p>
<list id="L3" list-type="order">
<list-item><p>Here is the first list item:</p>
<p>This list item contains a separate paragraph of information and then a quote.</p>
<p><disp-quote>
<p>Here is the quote that is part of the first list item. The disp-quote needs to be inside p tags to work.</p>
</disp-quote></p></list-item>
<list-item><p>Here is the second numbered point in the list:</p>
<p>This list item contains a separate paragraph of information and then a quote.</p>
<p><disp-quote>
<p>Here is the quote that is part of the second list item.</p>
</disp-quote></p></list-item>
</list>

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CS001 Project Specification 1.1

Tables

NOTE: align=”char” is NOT supported by most browsers. Therefore, we do not recommend using this in the XML and
would prefer left/right/center only for the align attribute

<table-wrap id="T1" position="float" >

<label>Table 1.&#x02003;</label>
<caption>
<title>Table title table title table title.</title>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top">Text</th>
<th align="center" valign="top">Text</th>
<th align="center" valign="top">Text</th>
<th align="center" valign="top">Text <xref ref-type="table-fn" rid="TFN1">^A</xref></th>
<th align="center" valign="top">Text</th>
<th align="center" valign="top">Text</th>
<th align="center" valign="top">Text</th>
<th align="center" valign="top">Text</th>
<th align="center" valign="top">Text</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">Text</td>
<td align="right" style="color:rgb(255,255,0);background-color:rgb(248,105,107);">0.1</td>
<td align="right" style="color:rgb(255,0,0);background-color:rgb(232,246,235);">1.1</td>
<td align="right" style="color:rgb(0,0,255);background-color:rgb(218,240,224);">1.0 <xref ref-type="table-fn"
rid="TFN2">^B</xref></td>
<td align="right" style="background-color:rgb(199,232,208);"/>
<td align="right" style="background-color:rgb(193,229,202);"/>
<td align="right" style="background-color:rgb(168,219,181);"/>
<td align="right" style="background-color:rgb(99,190,123);"/>
<td align="right" style="background-color:rgb(154,213,169);"/>
</tr>
<tr>
<td align="left" valign="top" style="color:white;background-color:navy;">Table text</td>
<td align="center" valign="top" style="color:yellow;background-color:lightcoral;">Table text</td>
<td align="center" valign="top" style="color:red;background-color:honeydew;">Table text</td>
<td align="center" valign="top" style="color:blue;background-color:lightgreen;">Table text</td>
<td align="center" valign="top" style="color:black;background-color:mediumaquamarine;">Table text</td>
<td align="center" valign="top" style="color:black;background-color:mediumseagreen;">Table text</td>
<td align="center" valign="top" style="color:black;background-color:darkseagreen;">Table text</td>
<td align="center" valign="top" style="color:white;background-color:forestgreen;">Table text</td>
<td align="center" valign="top" style="color:white;background-color:green;">Table text</td>
</tr>

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CS001 Project Specification 1.1

</tbody>
</table>
<table-wrap-foot>
<fn-group>
<p>Table footnote - a general note about the whole table</p>
<fn id="TFN1" symbol="A"><p>Footnote specific to one cell that has an id.</p></fn>
<fn id="TFN2" symbol="B"><p>Another footnote specific to a different cell.</p></fn>
</fn-group>
</table-wrap-foot>
</table-wrap>

Note table shading and coloured text permitted if necessary, only using named colours from list here
https://www.w3.org/wiki/CSS/Properties/color/keywords

If a table contains coloured shading that can’t be rendered using named colours RGB or hex values are permitted as
noted. This is not the preferred option.

NOTE that both color (text) and background-color (shading) are required for the colours to display correctly in our
system

Figures
<p>Here is a figure (<xref ref-type="fig" rid="F1">Fig. 1<italic>a</italic></xref>) that shows some information.</p>
<fig id="F1" fig-type="figure" position="float">
<label>Fig. 1.</label>
<caption>
<p>Caption text caption text caption text caption text.</p>
</caption>
<graphic xlink:href="XXXXXXX_TOC.gif">
<alt-text>Alt text less than 120 characters</alt-text>
</graphic>
</fig>

Equations
Display

<p>Here is a display equation</p>

<disp-formula id="E1">
<label>(1)</label>
<mml:math display="block">
<mml:mi>f</mml:mi>
<mml:mfenced>
<mml:mrow>
<mml:munderover>
<mml:mrow>
<mml:mo>&#x02211;</mml:mo>

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CS001 Project Specification 1.1

<mml:msub>
<mml:mi>w</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>&#x000D7;</mml:mo>
<mml:msub>
<mml:mi>x</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mo>&#x0003D;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mi>n</mml:mi>
</mml:munderover>
<mml:mo>&#x0002B;</mml:mo>
<mml:mo/>
<mml:mi>b</mml:mi>
</mml:mrow>
</mml:mfenced>
</mml:math></disp-formula>

Inline

<inline-formula>
<mml:math display="inline">
<mml:msub>
<mml:mrow>
<mml:mi>E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>ign</mml:mtext>
</mml:mrow>
</mml:msub>
<mml:mo>&#x0003D;</mml:mo>
<mml:msubsup>
<mml:mo>&#x0222B;</mml:mo>
<mml:mn>0</mml:mn>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>ign</mml:mtext>
</mml:mrow>
</mml:msub>

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CS001 Project Specification 1.1

</mml:mrow>
</mml:msubsup>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>q</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>eff</mml:mtext>
</mml:mrow>
</mml:msub>
<mml:mtext>d</mml:mtext>
<mml:mi>t</mml:mi>
</mml:mrow>
</mml:math></inline-formula>

Boxes [can now include figures, tables, mml and lists as required when tagged as below]
<p>Here is a box feature (<xref ref-type="box" rid="B1">Box 1</xref>).</p>
<boxed-text position="float" id="B1">
<label>Box 1.&#x02003;</label>
<caption>
<title>This is the box title</title>
</caption>
<p>Box text first para text para text box para text.</p>
<p>Second para text box text box text.</p>
<p>Here is a figure that appears in the box (<xref ref-type="fig" rid="F2">Fig. 2</xref>).</p>
<p> <fig id="F1" fig-type="figure" position="float">
<label><bold>Fig. 2.</bold>&#x2003;</label>
<caption>
<p>Caption text caption text caption text caption text.</p>
</caption>
<graphic xlink:href="XXXXXXX_F2.gif">
<alt-text>Alt text less than 120 characters</alt-text>
</graphic>
</fig>
</p>
<p>Here is a display equation inside the box</p>
<p><disp-formula id="E2">
<label>(2)</label>
<mml:math display="block">
<mml:mi>f</mml:mi>
<mml:mfenced>
<mml:mrow>
<mml:munderover>
<mml:mrow>
<mml:mo>&#x02211;</mml:mo>
<mml:msub>
<mml:mi>w</mml:mi>

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CS001 Project Specification 1.1

<mml:mi>i</mml:mi>
</mml:msub>
<mml:mo>&#x000D7;</mml:mo>
<mml:msub>
<mml:mi>x</mml:mi>
<mml:mi>i</mml:mi>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mo>&#x0003D;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mi>n</mml:mi>
</mml:munderover>
<mml:mo>&#x0002B;</mml:mo>
<mml:mo/>
<mml:mi>b</mml:mi>
</mml:mrow>
</mml:mfenced>
</mml:math>XXXXXXX_E1.gif</disp-formula></p>
<p>Here is a list that appears in the box.
<list id="L3" list-type="order">
<list-item>Numbered list text</list-item>
<list-item>Numbered list text</list-item>
</list></p>
</boxed-text>

Quotes
<p>Here is a quote. Note the placement of the p tags.
<disp-quote>
<p>Quote text quote text quote text quote text. [Name of quote author]</p>
</disp-quote>
</p>

Taxonomy [sec-type="taxonomy" has specific formatting rules]

<sec disp-level="1" sec-type="taxonomy">
<title>Taxonomy</title>
<sec disp-level="2" sec-type="species">
<title>Family <bold>THIS SHOULD BE BOLD</bold> Name, Year</title>
</sec>
<sec disp-level="2" sec-type="species">
<title>Subfamily <bold>THIS SHOULD BE BOLD</bold> Name, Year</title>
</sec>
<sec disp-level="2" sec-type="species">
<title>Tribe <bold>THIS SHOULD BE BOLD</bold> Name, Year</title>
</sec>

14
CS001 Project Specification 1.1

<sec disp-level="2" sec-type="species">

<title>Genus <italic><bold>Austrocarausius (Italic and bold)</bold></italic> Brock</title>
<p><named-content content-type="synonomy"><italic>Austrocarausius</italic> <xref ref-type="bibr" rid="R5">Brock,
2000</xref>, p. 51. <italic>Type species</italic>: <italic>Lonchodes nigropunctatus</italic> <xref ref-type="bibr"
rid="R22">Kirby, 1896</xref>, p. 453, by original designation.</named-content></p>
<p><named-content content-type="synonomy"><italic>Austrocarausius</italic> Brock &#x02013; <xref ref-type="bibr"
rid="R25">Otte &#x00026; Brock, 2005</xref>, p. 57; <xref ref-type="bibr" rid="R6">Brock &#x00026; Hasenpusch,
2007</xref>, p. 69; <xref rid="R19" ref-type="bibr">Hennemann &#x00026; Conle, 2008</xref>, p. 76; <xref ref-
type="bibr" rid="R7">Brock &#x00026; Hasenpusch, 2009</xref>, p. 160.</named-content></p>
<sec disp-level="3">
<title>Description (in the PDF this is an H2 but H3 in XML)</title>
<p>Described in <xref ref-type="bibr" rid="R5">Brock (2000</xref>, p. 52).</p>
</sec>
<sec disp-level="3">
<title>Species included (in the PDF this is an H2 but H3 in XML)</title>
<p><italic>Austrocarausius coronatus</italic> sp. nov. (northern Qld: Garradunga; ZooBank number: CC454399-B83A-
4648-BA43-DE5B9311F5C5).</p>
<def-list list-content="taxonomic-key" list-type="simple" id="tk1">
<title>Key to adult <italic>Austrocarausius</italic> females (specific style in PDF - same size/colour as H1, but no
underline)</title>
<term-head>Unknown females: <italic>A. truncatus</italic>, <italic>A. tuberosus</italic> and <italic>A.
walkeri</italic>.</term-head>
<def-item>
<term>1</term>
<def>
<p>No disjointed black ventral thorax stripe (CS001 project CSS adds the dots whenever key-referrer content type is
present) <named-content content-type="key-referrer"><bold>2</bold></named-content></p>
<p>Disjointed black ventral stripe on pronotum, mesonotum and metanotum, pair of spines between eyes, dark
coloured tubercles over entire body, short tumescence protruding at end of abdominal segments 1&#x02013;6, white
bands at end of each femora (<xref ref-type="fig" rid="F3">Fig. 3<italic>f</italic></xref>, <xref rid="F4" ref-
type="fig">4<italic>f</italic></xref>, <xref rid="F5" ref-type="fig">5<italic>f</italic></xref>, Supplementary Fig.
S3<italic>i</italic>, S4<italic>f</italic>) <named-content content-type="key-referrer"><italic><bold>A.
eirmosus</bold></italic><bold> sp. nov.</bold></named-content></p>
</def>
</def-item>
</def-list>
</sec>
<sec disp-level="2" sec-type="species">
<title><italic><bold>Austrocarausius nigropunctatus</bold></italic> (Kirby, 1896)</title>
<p>(Black-spotted Stick-insect)</p>
<p><named-content content-type="synonomy"><italic>Lonchodes nigropunctatus</italic> <xref ref-type="bibr"
rid="R22">Kirby, 1896</xref>, p. 453. <italic>Holotype</italic>: &#x02640; Australia: Qld, Lizard Island
(NHMUK).</named-content></p>
<sec disp-level="3">
<title>Diagnosis</title>
<p>Pair of short spines between eyes. Body smooth, with no flanges (<xref rid="F6" ref-type="fig">Fig.
6<italic>a</italic></xref>).</p>
</sec>
<sec disp-level="3">
<title>Description (H2 in PDF, H3 in XML)</title>
<p>&#x02003;<bold>Female (H3 in PDF which includes the indent so think this will have to stay as is)</bold></p>

15
CS001 Project Specification 1.1

<p>&#x02003;Described in <xref ref-type="bibr" rid="R5">Brock (2000</xref>, p. 52) (NHMUK).</p>

<p>&#x02003;<bold>Male</bold></p>
<p>&#x02003;Described in <xref ref-type="bibr" rid="R9">Brunner von Wattenwyl (1907</xref>, p. 275) (as the
synonym <italic>Carausius macerrimus</italic>).</p>
<p>&#x02003;<bold>Egg</bold></p>
<p>&#x02003;Described in <xref ref-type="bibr" rid="R5">Brock (2000</xref>, p. 52) (NHMUK) (<xref ref-type="fig"
rid="F11">Fig. 11<italic>a</italic></xref>).</p>
</sec>
<sec disp-level="3">
<title>Specimens examined</title>
<p>&#x02642; Quandong Road, Cow Bay, Qld,16&#x000B0;13&#x02032;51&#x02033;S,
145&#x000B0;27&#x02032;15&#x02033;E, 30.i.2019, B. Jones and N. Tweed, BJ-240 (QM; Registration number:
T258567; GenBank numbers: ON101990, OM992332); &#x02642; same data, BJ-242 (QM; Registration number:
T258569; GenBank numbers ON101991, OM992334); &#x02642; same data, BJ-241 (QM; Registration number:
T258568; GenBank number: OM992333); &#x02642; same data, BJ-243 (QM; Registration number: T258570; GenBank
numbers: ON101992, OM992335); &#x02640; same data, BJ-245 (QM; Registration number: T258571; GenBank
numbers: ON077343, OM992337); &#x02640; same data, BJ-246 (QM; Registration number: T258572; GenBank
numbers: ON101994, OM992338).</p>
</sec>
</sec></sec>
</sec>

Nomenclature
<sec>
<title>Nomenclature</title>
<def-list>
<def-item>
<term id="G1">X</term>
<def><p>Definition for X</p></def>
</def-item>
<def-item>
<term id="G2">Y</term>
<def><p>Definition for Y</p></def>
</def-item>
<def-item>
<term id="G3">Z</term>
<def><p>Definition for Z</p></def>
</def-item>
</def-list>
</sec>

16
CS001 Project Specification 1.1

Back matter
<back>

Author statements
<sec disp-level="1" sec-type="other1">
<title>Data availability</title>
<p>Data is available on request.</p>
</sec>
<sec disp-level="1" sec-type="other2">
<title>Conflicts of interest</title>
<p>The authors declare no conflicts of interest.</p>
</sec>
<sec disp-level="1" sec-type="other3">
<title>Declaration of funding</title>
<p>This research did not receive any specific funding.</p>
</sec>

Acknowledgements
<ack>
<title>Acknowledgements</title>
<p>Acknowledgement text acknowledgement text acknowledgement text acknowledgement text.</p>
</ack>

References
Journal (element) citations with page range

<ref id="R1"><element-citation publication-type="journal"><person-group person-group-

type="author"><name><surname>Surname</surname><given-names>N</given-
names></name><name><surname>Surname</surname><given-names>N</given-names></name></person-
group><year>2020</year><comment/><article-title>Here is the journal paper title.</article-title><source>Journal
name</source><volume>XX</volume><issue>X</issue><fpage>X</fpage><lpage>XX</lpage><pub-id pub-id-
type="doi">10.1071/XXXXXXX</pub-id><comment/></element-citation></ref>

Journal (element) citation with elocation ID (article number)

<ref id="R2"><element-citation publication-type="journal"><person-group person-group-

type="author"><name><surname>Surname</surname><given-names>N</given-names></name></person-
group><year>1998</year><comment/><article-title>Article with elocation ID instead of page range.</article-
title><source>Journal name</source><volume>XX</volume><elocation-id>artNo</elocation-id><pub-id pub-id-
type="doi">10.1071/XXXXXXX</pub-id><comment/></element-citation></ref>

Journal (element) citation (with URL instead of DOI)

<ref id="R3"><element-citation publication-type="journal"><person-group person-group-

type="author"><name><surname>Surname</surname><given-names>N</given-names></name></person-
group><year>1922</year><comment/><article-title>Journal article with URL instead of DOI.</article-
title><source>Journal name</source><volume>XX</volume><fpage>XX</fpage><lpage>XXX</lpage><comment/><ext-

17
CS001 Project Specification 1.1

link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink"

xlink:href="https://pub.epsilon.slu.se/10087/1/medd_statens_skogsforskningsanst_019_04.pdf">https://pub.epsilon.sl
u.se/10087/1/medd_statens_skogsforskningsanst_019_04.pdf</ext-link><comment/></element-citation></ref>

Mixed citations – Book chapter (with doi) Harvard

<ref id="R4"><mixed-citation publication-type="book chapter">Surname N, Surname N, Surname N (2000) Chapter

title. In &#x2018;Book title&#x2019;. (Eds N Surname, N Surname) pp. XX&#x2013;XX. (Publisher: location) <ext-link
ext-link-type="doi" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="https://doi.org/10.1007/978-3-319-
04084-4_34">10.1007/978-3-319-04084-4_34</ext-link></mixed-citation></ref>

Mixed citations – Web (with URL) Harvard

<ref id="R5"><mixed-citation publication-type="web">Company as author (1985) Title of web content. Available at

<ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink"
xlink:href="https://library.dbca.wa.gov.au/#record/151608">https://library.dbca.wa.gov.au/&#x0023;record/151608</
ext-link></mixed-citation></ref>

Mixed citations – Book (with URL) Harvard

<ref id="R6"><mixed-citation publication-type="book">Surname N, Surname N, Surname N (2011) &#x2018;Book

title.&#x2019; (Publisher: Location) Available at <ext-link ext-link-type="uri"
xmlns:xlink="http://www.w3.org/1999/xlink"
xlink:href="https://www.publish.csiro.au/book/6418/">https://www.publish.csiro.au/book/6418/</ext-link>

Mixed citations – Conference (with URL) Harvard

<ref id="R7"><mixed-citation publication-type="conference">Surname N, Surname N, Surname N (2012) Conference

paper title. In &#x2018;Name and location of confererence&#x2019; Available at <ext-link ext-link-type="uri"
xmlns:xlink="http://www.w3.org/1999/xlink"
xlink:href="https://researchrepository.murdoch.edu.au/id/eprint/19728/1/increasing_soil_carbon_storage.pdf">https:
//researchrepository.murdoch.edu.au/id/eprint/19728/1/increasing_soil_carbon_storage.pdf</ext-link></mixed-
citation></ref>

Mixed citations – Book Vancouver

<ref id="R8"><mixed-citation publication-type="book">Hair JF, Ortinau DJ, Harrison DE. Essentials of marketing
research. New York, NY: McGraw-Hill/Irwin; 2010.</mixed-citation></ref>

Mixed citations – Web (with URL) Vancouver

<ref id="R9><mixed-citation publication-type="web">Liknaitzky P. World-first psilocybin clinical trial in the treatment of

Generalised Anxiety Disorder receives ethics approval. 2021.&#x000A0;Available at <ext-link ext-link-type="uri"
xlink:href="https://www.monash.edu/news/articles/world%E2%80%90first%E2%80%90psilocybin%E2%80%90clinical%
E2%80%90trial%E2%80%90in%E2%80%90the%E2%80%90treatment%E2%80%90of%E2%80%90generalised%E2%80%9
0anxiety%E2%80%90disorder%E2%80%90receives%E2%80%90ethics%E2%80%90approval">https://www.monash.edu/
news/articles/world&#x02010;first&#x02010;psilocybin&#x02010;clinical&#x02010;trial&#x02010;in&#x02010;the&#x
02010;treatment&#x02010;of&#x02010;generalised&#x02010;anxiety&#x02010;disorder&#x02010;receives&#x02010;
ethics&#x02010;approval</ext-link></mixed-citation></ref>

Appendices
<app-group>
<app>
<sec>

18
CS001 Project Specification 1.1

<label>Appendix 1.</label>
<title>Title of appendix</title>
<p>Where present, appendices can contain the same elements as the body section. For example:</p>
<table-wrap id="TA1" position="float">
<label>Table A1.</label>
<caption>
<title>Table title table title table title.</title>
</caption>
<table frame="hsides" rules="groups">
<col width="X"/>
<col width="X"/>
<col width="X"/>
<thead>
<tr>
<td align="left" valign="top">Text</td>
<td align="center" valign="top">Text</td>
<td align="center" valign="top">Text</td>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top" style="color:white;background-color:navy;">Table text</td>
<td align="center" valign="top" style="color:black;background-color:red;">Table text</td>
<td align="center" valign="top" style="color:white;background-color:green;">Table text</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p>Table footnote</p>
</table-wrap-foot>
</table-wrap>
</sec>
</app>
</app-group>

Footnotes
<fn-group>
<fn id="FN1" symbol="&#x2020;"><p>Preprint version <ext-link ext-link-type="uri"
xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="https://doi.org/10.21203/rs.3.rs-
1267830/v1">https://doi.org/10.21203/rs.3.rs-1267830/v1</ext-link></p></fn>
</fn-group>
</back>

19