FastQCFastQC Report
Tue 7 May 2024
EGAF00002869312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002869312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16718
Total Bases2.5 Mbp
Sequences flagged as poor quality0
Sequence length154
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC1074764.28400526378753No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTAGAA9235.52099533437014No Hit
TTGCGGCTGCCTCCACTGCCCAGGCAGCCAGGCCCCACTTTGCGGCTCTC7124.2588826414642895No Hit
TTGCGGCTGCCTCCACTGCGCCCAGTCCCATCGACCACCCAAGGGCTGAG5002.9907883718148103No Hit
TTGCGGCTGCCTCCACTGCCAATACCGTGCGGGTCAGGCAGCTTGTCGAA2651.5851178370618495No Hit
TTGCGGCTGCCTCCACTGCTCGCCCTTCAGCCTGGACCGCCCCCCTCCAC2151.2860389998803685No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTAGAA1791.0707022371097021No Hit
TTGCGGCTGCCTCCACTGCCCCGGTAGCCAGGCCCCACTTTGCGGCTCTC1260.7536786696973322No Hit
TTGCGGCTGCCTCCACTGCGGCCTGTGTTCAACAACTTCCCACTCAACAT1200.7177892092355544No Hit
TTGCGGCTGCCTCCACTGCGCCCCGTCCCATCGACCACCCAAGGGCTGAG1170.6998444790046656No Hit
TTGCGGCTGCCTCCACTGCACGCGGCCGCCCGGGGAGGCCACACAGAGGC870.520397176695777No Hit
TTGCGGCTGCCTCCACTGCGCCCAGTCCCATCGACCACCCCAGGGCTGAG820.4904892929776289No Hit
TTGCGGCTGCCTCCACTGCCAATCCCGTGCGGGTCAGGCAGCTTGTCGAA720.43067352554133265No Hit
TTGCGGCTGCCTCCACTGCGGGGGTTCTTCTGATTCAGGGTGAGTGAGGC600.3588946046177772No Hit
TTGCGGCTGCCTCCACTGCACCAAAGAAAATTATATTCCCCGTGCGGGTC580.346931451130518No Hit
TTGCGGCTGCCTCCACTGCCGAGGGGAGCAAGAGTGGCCGCAGCTTTGAA410.24524464648881444No Hit
TTGCGGCTGCCTCCACTGCCAAGGTAGCCAGGCCCCACTTTGCGGCTCTC390.23328149300155523No Hit
TTGCGGCTGCCTCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG370.22131833951429597No Hit
TTGCGGCTGCCTCCACTGCCGAGGTAGCCAGGCCCCACTTTGCGGCTCTC350.20935518602703673No Hit
TTGCGGCTGCCTCCACTGCGGCCTGTGTTCAACAACTTCCCACTCACCAT340.20337360928340711No Hit
TTGCGGCTGCCTCCACTGCACGCGGCCGCCCGGGGAGGCCACACAGCGGC340.20337360928340711No Hit
TTGCGGCTGCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCG320.19141045579614788No Hit
TTGCGGCTGCCTCCACTGCGCCCCGTCCCATCGACCACCCCAGGGCTGAG320.19141045579614788No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCCC310.18542887905251823No Hit
TTGCGGCTGCCTCCACTGCTCAGGTAGCCAGGCCCCACTTTGCGGCTCTC300.1794473023088886No Hit
TTGCGGCTGCCTCCACTGCTCCCCGCCCGGGCCCGGAGCTCACCAACCAC270.16150257207799976No Hit
TTGCGGCTGCCTCCACTGCGCTCGTGCGGGTCAGGCAGCTTGTAGAACCA250.14953941859074052No Hit
TTGCGGCTGCCTCCACTGCCTAGGTAGCCAGGCCCCACTTTGCGGCTCTC240.1435578418471109No Hit
TTGCGGCTGCCTCCACTGCAGAAATGTTGTGACGATGTCCCCGTGCGGGT230.13757626510348128No Hit
AAGACAGAGAGCTCAGGTTTAGTTCAGAGTGCTGTAGAACCATGTCGTCA230.13757626510348128No Hit
TTGCGGCTGCCTCCACTGCCCGGGTAGCCAGGCCCCACTTTGCGGCTCTC230.13757626510348128No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCGGGCCCCACTTTGCGGCTCTC220.13159468835985166No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTGCGGCCCTC220.13159468835985166No Hit
TTGCGGCTGCCTCCACTGCCCAGGGAGCCAGGCCCCACTTTGCGGCTCTC220.13159468835985166No Hit
TTGCGGCTGCCTCCACTGTCCAGGTAGCCAGGCCCCACTTTGCGGCTCTC210.12561311161622205No Hit
TTGCGGCTGCCTCCACTGCGGGGGTTCTTCTGATTCAGGGTGAGTGCGGC200.11963153487259241No Hit
TTGCGGCTGCCTCCACTGCGGGCGCCCGGGGCGGCCGCGACAACCCCACC190.1136499581289628No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCGCTTTGCGGCTCTC180.10766838138533316No Hit
TTGCGGCTGCCTCCACTGCAGGCGTCGCTAAATGACGTTGCCGTGCGGGT180.10766838138533316No Hit
TTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTCGCGGCTCTC170.10168680464170356No Hit
TTGCGGCTGCCTCCACTGCCCAGGTGGCCAGGCCCCACTTTGCGGCTCTC170.10168680464170356No Hit
TTGCGGCTGCCTCCACTGCCCAGGCCGCCAGGCCCCACTTTGCGGCTCTC170.10168680464170356No Hit
TTGCGGCTGCCTCCACTGCTCCGTGCGGGTCAGGCAGCTTGTAGAACCAT170.10168680464170356No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)