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Support for BrainVoyager VTC, MSK, VMR and NR-VMP files #216

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Support for BrainVoyager VTC, MSK, VMR and NR-VMP files #216

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4699742
First implementation. Copy of LabeledWrapStruct without inheritance.
thomastweets Nov 28, 2013
a87853d
TEST: Fix failing test_image_api tests for new BV test files.
thomastweets Aug 17, 2016
9a13fd2
TEST+PL: Fix python3 string issues and linting.
thomastweets Aug 17, 2016
d2929fc
TEST: Fix rint error message filtering in test_image_api.
thomastweets Aug 18, 2016
9da49dc
TEST: Add more BV tests.
thomastweets Aug 18, 2016
aaa9a95
TEST: Remove try block around dtype and dimension checks.
thomastweets Aug 18, 2016
880b89a
PL: Correct docstrings and variable naming (PEP8).
thomastweets Sep 21, 2016
fdd34b5
DOC+PL: docstring corrections and minor clarifications.
thomastweets Sep 21, 2016
351ca44
DOC+PL+TEST: Correct docstrings and change to property decorators.
thomastweets Feb 27, 2017
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2 changes: 2 additions & 0 deletions nibabel/__init__.py
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Original file line number Diff line number Diff line change
Expand Up @@ -51,6 +51,8 @@
from .nifti2 import Nifti2Header, Nifti2Image, Nifti2Pair
from .minc1 import Minc1Image
from .minc2 import Minc2Image
from .brainvoyager import (BvMskHeader, BvMskImage, BvVmpHeader, BvVmpImage,
BvVtcHeader, BvVtcImage, BvVmrHeader, BvVmrImage)
# Deprecated backwards compatiblity for MINC1
from .deprecated import ModuleProxy as _ModuleProxy
minc = _ModuleProxy('nibabel.minc')
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5 changes: 5 additions & 0 deletions nibabel/arrayproxy.py
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Original file line number Diff line number Diff line change
Expand Up @@ -164,3 +164,8 @@ def is_proxy(obj):
return obj.is_proxy
except AttributeError:
return False


class CArrayProxy(ArrayProxy):
# Assume C array memory layout
order = 'C'
18 changes: 18 additions & 0 deletions nibabel/brainvoyager/__init__.py
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Original file line number Diff line number Diff line change
@@ -0,0 +1,18 @@
# emacs: -*- mode: python-mode; py-indent-offset: 4; indent-tabs-mode: nil -*-
# vi: set ft=python sts=4 ts=4 sw=4 et:
### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##
#
# See COPYING file distributed along with the NiBabel package for the
# copyright and license terms.
#
### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##
''' Support for BrainVoyager file formats '''
from .bv_msk import BvMskHeader, BvMskImage
from .bv_vmp import BvVmpHeader, BvVmpImage
from .bv_vtc import BvVtcHeader, BvVtcImage
from .bv_vmr import BvVmrHeader, BvVmrImage

__all__ = ('BvMskHeader', 'BvMskImage',
'BvVmpHeader', 'BvVmpImage',
'BvVtcHeader', 'BvVtcImage',
'BvVmrHeader', 'BvVmrImage')
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