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optmization_schema error in GTMPVC - petsurfer interface #3570

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mnoergaard opened this issue May 17, 2023 · 0 comments · Fixed by #3571
Closed

optmization_schema error in GTMPVC - petsurfer interface #3570

mnoergaard opened this issue May 17, 2023 · 0 comments · Fixed by #3571

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@mnoergaard
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Summary

Input and output relation for optimization_schema (input) does not match 'opt' in output in the GTMPVC class in the petsurfer interface.

Actual behavior

Traceback:
if self.inputs.opt:
AttributeError: 'GTMPVCInputSpec' object has no attribute 'opt'

Expected behavior

How to replicate the behavior

Script/Workflow details

Please put URL to code or code here (if not too long).

Platform details:

{'commit_hash': '<not found>',
 'commit_source': '(none found)',
 'networkx_version': '3.1',
 'nibabel_version': '5.1.0',
 'nipype_version': '1.8.6',
 'numpy_version': '1.24.2',
 'pkg_path': '/Users/martinnorgaard/anaconda3/envs/petprep_extract_tacs/lib/python3.9/site-packages/nipype',
 'scipy_version': '1.10.1',
 'sys_executable': '/Users/martinnorgaard/anaconda3/envs/petprep_extract_tacs/bin/python',
 'sys_platform': 'darwin',
 'sys_version': '3.9.16 | packaged by conda-forge | (main, Feb  1 2023, '
                '21:38:11) \n'
                '[Clang 14.0.6 ]',
 'traits_version': '6.3.2'}

Execution environment

Choose one

  • Container [Tag: ???]
  • My python environment inside container [Base Tag: ???]
  • My python environment outside container
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