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@openworm

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.
README.md

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.

An overview of the core repositories in the project, along with the current status of automated testing, can be found here.

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  1. OpenWorm OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    Python 2.7k 212

  2. openworm.github.io openworm.github.io Public

    OpenWorm main website

    HTML 25 35

  3. org.geppetto org.geppetto Public

    Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.

    Python 210 50

  4. c302 c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    Python 109 21

  5. ChannelWorm2 ChannelWorm2 Public

    Tools and curated datasets to build quantitative models of C. elegans ion channels

    Jupyter Notebook 10 2

Repositories

Showing 10 of 101 repositories
  • geppetto-client Public

    The web client of a Geppetto application

    openworm/geppetto-client’s past year of commit activity
    JavaScript 5 2 70 29 Updated Nov 21, 2024
  • NicolettiEtAl2019_NeuronModels Public Forked from ModelDBRepository/267187

    Biophysical models of AWCon and RMD C. elegans neurons (M. Nicoletti at al. 2019)

    openworm/NicolettiEtAl2019_NeuronModels’s past year of commit activity
    Python 0 2 1 0 Updated Nov 19, 2024
  • NicolettiEtAl2024_MN_IN Public Forked from ModelDBRepository/2017403

    C.elegans motor and interneurons (Nicoletti at al. 2024)

    openworm/NicolettiEtAl2024_MN_IN’s past year of commit activity
    Python 0 2 0 0 Updated Nov 19, 2024
  • ConnectomeToolbox Public

    Information on published connectomics data related to C. elegans

    openworm/ConnectomeToolbox’s past year of commit activity
    Python 1 3 1 0 Updated Nov 15, 2024
  • hodgkin_huxley_tutorial Public

    A repository containing code for a number of tutorials on the Hodgkin Huxley model, including an interactive Jupyter notebook

    openworm/hodgkin_huxley_tutorial’s past year of commit activity
    Python 40 LGPL-3.0 9 5 0 Updated Nov 5, 2024
  • OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    openworm/OpenWorm’s past year of commit activity
    Python 2,691 MIT 212 41 5 Updated Oct 28, 2024
  • c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    openworm/c302’s past year of commit activity
    Python 109 21 16 (1 issue needs help) 1 Updated Oct 28, 2024
  • org.geppetto.frontend Public

    Geppetto Java frontend bundle

    openworm/org.geppetto.frontend’s past year of commit activity
    Java 29 25 2 4 Updated Oct 27, 2024
  • sibernetic Public

    This is a C++/OpenCL implementation of the PCISPH algorithm supplemented with a set of biomechanics related features applied to C. elegans locomotion

    openworm/sibernetic’s past year of commit activity
    C 360 105 30 7 Updated Oct 9, 2024
  • sibernetic_v3 Public

    Cluster code

    openworm/sibernetic_v3’s past year of commit activity
    C++ 1 MIT 0 0 0 Updated Sep 27, 2024
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