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Merged
merged 3 commits into from
Aug 6, 2022
Merged

Switch CI to mambaforge and conda-forge channel #757

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813572f
New job name format
bnavigator Aug 5, 2022
c617b33
switch to mambaforge setup with strict conda-forge channel
bnavigator Aug 5, 2022
afb1ce0
fix conda enviroment shell
bnavigator Aug 5, 2022
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11 changes: 11 additions & 0 deletions .github/conda-env/test-env.yml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,11 @@
name: test-env
dependencies:
- pip
- coverage
- coveralls
- pytest
- pytest-cov
- pytest-timeout
- numpy
- matplotlib
- scipy
53 changes: 29 additions & 24 deletions .github/workflows/python-package-conda.yml
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Expand Up @@ -4,7 +4,12 @@ on: [push, pull_request]

jobs:
test-linux:
name: Python ${{ matrix.python-version }}${{ matrix.slycot && format(' with Slycot from {0}', matrix.slycot) || ' without Slycot' }}${{ matrix.pandas && ', with pandas' || '' }}${{ matrix.array-and-matrix == 1 && ', array and matrix' || '' }}${{ matrix.cvxopt && format(' with cvxopt from {0}', matrix.cvxopt) || ' without cvxopt' }}
name: >
Py${{ matrix.python-version }};
${{ matrix.slycot || 'no' }} Slycot;
${{ matrix.pandas || 'no' }} Pandas;
${{ matrix.cvxopt || 'no' }} CVXOPT;
${{ matrix.array-and-matrix == 1 && '; array and matrix' || '' }}
runs-on: ubuntu-latest

strategy:
Expand All @@ -22,43 +27,43 @@ jobs:
array-and-matrix: 1

steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3

- name: Install dependencies
run: |
# Set up conda
echo $CONDA/bin >> $GITHUB_PATH
conda create -q -n test-environment python=${{matrix.python-version}}
source $CONDA/bin/activate test-environment

# Set up (virtual) X11
sudo apt install -y xvfb
- name: Set up (virtual) X11
run: sudo apt install -y xvfb

# Install test tools
conda install pip coverage pytest pytest-timeout
pip install coveralls
- name: Setup Conda
uses: conda-incubator/setup-miniconda@v2
with:
python-version: ${{ matrix.python-version }}
activate-environment: test-env
environment-file: .github/conda-env/test-env.yml
miniforge-version: latest
miniforge-variant: Mambaforge
channels: conda-forge
channel-priority: strict
auto-update-conda: false
auto-activate-base: false

# Install python-control dependencies
conda install numpy matplotlib scipy
- name: Install optional dependencies
shell: bash -l {0}
run: |
if [[ '${{matrix.slycot}}' == 'conda' ]]; then
conda install -c conda-forge slycot
mamba install slycot
fi
if [[ '${{matrix.pandas}}' == 'conda' ]]; then
conda install pandas
mamba install pandas
fi
if [[ '${{matrix.cvxopt}}' == 'conda' ]]; then
conda install -c conda-forge cvxopt
mamba install cvxopt
fi

- name: Test with pytest
shell: bash -l {0}
env:
PYTHON_CONTROL_ARRAY_AND_MATRIX: ${{ matrix.array-and-matrix }}
run: |
source $CONDA/bin/activate test-environment
# Use xvfb-run instead of pytest-xvfb to get proper mpl backend
# Use coverage instead of pytest-cov to get .coverage file
# See https://github.com/python-control/python-control/pull/504
xvfb-run --auto-servernum coverage run -m pytest control/tests
xvfb-run --auto-servernum pytest --cov=control --cov-config=.coveragerc control/tests

- name: Coveralls parallel
# https://github.com/coverallsapp/github-action
Expand Down