scikit-learn · thomasjpfan · Jan 9, 2020 · Jan 9, 2020 · Jan 10, 2020 · Jan 10, 2020
diff --git a/.binder/requirements.txt b/.binder/requirements.txt
@@ -1,4 +1,4 @@
---find-links https://sklearn-nightly.scdn8.secure.raxcdn.com scikit-learn
+--extra-index https://pypi.anaconda.org/scipy-wheels-nightly/simple scikit-learn
 --pre
 matplotlib
 scikit-image

diff --git a/.circleci/config.yml b/.circleci/config.yml
@@ -9,17 +9,17 @@ jobs:
       - MKL_NUM_THREADS: 2
       - MINICONDA_PATH: ~/miniconda
       - CONDA_ENV_NAME: testenv
-      - PYTHON_VERSION: 3.5
-      - NUMPY_VERSION: 1.11.0
-      - SCIPY_VERSION: 0.17.0
-      - MATPLOTLIB_VERSION: 1.5.1
+      - PYTHON_VERSION: 3.6
+      - NUMPY_VERSION: 1.13.3
+      - SCIPY_VERSION: 0.19.1
+      - MATPLOTLIB_VERSION: 2.1.1
       # on conda, this is the latest for python 3.5
       # The following places need to be in sync with regard to Cython version:
       # - .circleci config file
       # - sklearn/_build_utils/__init__.py
       # - advanced installation guide
       - CYTHON_VERSION: 0.28.5
-      - SCIKIT_IMAGE_VERSION: 0.12.3
+      - SCIKIT_IMAGE_VERSION: 0.13
     steps:
       - checkout
       - run: ./build_tools/circle/checkout_merge_commit.sh
@@ -101,7 +101,7 @@ jobs:
 
   pypy3:
     docker:
-      - image: pypy:3.6-7.1.1
+      - image: pypy:3.6-7.2.0
     steps:
       - restore_cache:
           keys:

diff --git a/.github/ISSUE_TEMPLATE/blank_template.md b/.github/ISSUE_TEMPLATE/blank_template.md
@@ -0,0 +1,10 @@
+---
+name: Other
+about: For all other issues to reach the community...
+title: ''
+labels: ''
+assignees: ''
+
+---
+
+
diff --git a/ISSUE_TEMPLATE.md → .github/ISSUE_TEMPLATE/bug_report.md b/ISSUE_TEMPLATE.md → .github/ISSUE_TEMPLATE/bug_report.md
@@ -1,27 +1,36 @@
+---
+name: Bug report
+about: Create a report to help us reproduce and correct the bug
+title: ''
+labels: 'Bug: triage'
+assignees: ''
+
+---
+
 <!--
-If your issue is a usage question, submit it here instead:
-- StackOverflow with the scikit-learn tag: https://stackoverflow.com/questions/tagged/scikit-learn
-- Mailing List: https://mail.python.org/mailman/listinfo/scikit-learn
-For more information, see User Questions: http://scikit-learn.org/stable/support.html#user-questions
+Before submitting a bug, please make sure the issue hasn't been already
+addressed by searching through the past issues.
 -->
 
-<!-- Instructions For Filing a Bug: https://github.com/scikit-learn/scikit-learn/blob/master/CONTRIBUTING.md#filing-bugs -->
-
-#### Description
-<!-- Example: Joblib Error thrown when calling fit on LatentDirichletAllocation with evaluate_every > 0-->
+#### Describe the bug
+<!--
+A clear and concise description of what the bug is.
+-->
 
 #### Steps/Code to Reproduce
 <!--
+Please add a minimal example that we can reproduce the error by running the
+code. Be as succinct as possible, do not depend on external data. In short, we
+are going to copy-paste your code and we expect to get the same
+result as you.
+
 Example:
 ```python
 from sklearn.feature_extraction.text import CountVectorizer
 from sklearn.decomposition import LatentDirichletAllocation
-
 docs = ["Help I have a bug" for i in range(1000)]
-
 vectorizer = CountVectorizer(input=docs, analyzer='word')
 lda_features = vectorizer.fit_transform(docs)
-
 lda_model = LatentDirichletAllocation(
     n_topics=10,
     learning_method='online',
@@ -34,6 +43,10 @@ If the code is too long, feel free to put it in a public gist and link
 it in the issue: https://gist.github.com
 -->
 
+```
+Sample code to reproduce the problem
+```
+
 #### Expected Results
 <!-- Example: No error is thrown. Please paste or describe the expected results.-->
 
@@ -51,6 +64,7 @@ import sys; print("Python", sys.version)
 import numpy; print("NumPy", numpy.__version__)
 import scipy; print("SciPy", scipy.__version__)
 import sklearn; print("Scikit-Learn", sklearn.__version__)
+import imblearn; print("Imbalanced-Learn", imblearn.__version__)
 -->
 
 

diff --git a/.github/ISSUE_TEMPLATE/config.yml b/.github/ISSUE_TEMPLATE/config.yml
@@ -0,0 +1 @@
+blank_issues_enabled: false
diff --git a/.github/ISSUE_TEMPLATE/doc_improvement.md b/.github/ISSUE_TEMPLATE/doc_improvement.md
@@ -0,0 +1,20 @@
+---
+name: Documentation improvement
+about: Create a report to help us improve the documentation. Alternatively you can just open a pull request with the suggested change.
+title: ''
+labels: Documentation
+assignees: ''
+
+---
+
+#### Describe the issue linked to the documentation
+
+<!--
+Tell us about the confusion introduced in the documentation.
+-->
+
+#### Suggest a potential alternative/fix
+
+<!--
+Tell us how we could improve the documentation in this regard.
+-->
diff --git a/.github/ISSUE_TEMPLATE/feature_request.md b/.github/ISSUE_TEMPLATE/feature_request.md
@@ -0,0 +1,22 @@
+---
+name: Feature request
+about: Suggest a new algorithm, enhancement to an existing algorithm, etc.
+title: ''
+labels: New Feature
+assignees: ''
+
+---
+
+<!--
+If you want to propose a new algorithm, please refer first to the scikit-learn
+inclusion criterion:
+https://scikit-learn.org/stable/faq.html#what-are-the-inclusion-criteria-for-new-algorithms
+-->
+
+#### Describe the workflow you want to enable
+
+#### Describe your proposed solution
+
+#### Describe alternatives you've considered, if relevant
+
+#### Additional context
diff --git a/.github/ISSUE_TEMPLATE/usage_question.md b/.github/ISSUE_TEMPLATE/usage_question.md
@@ -0,0 +1,20 @@
+---
+name: Usage question
+about: If you have a usage question
+title: ''
+labels: Question
+assignees: ''
+
+---
+
+<!--
+**If your issue is a usage question, please submit it in one of these other channels instead:**
+- **StackOverflow with the scikit-learn tag: https://stackoverflow.com/questions/tagged/scikit-learn**
+- **Mailing List: https://mail.python.org/mailman/listinfo/scikit-learn**
+- **Gitter: https://gitter.im/scikit-learn/scikit-learn**
+- **For more information, see User Questions: http://scikit-learn.org/stable/support.html#user-question**
+
+The issue tracker is used only to report issues and feature requests. For
+questions, please use either of the above platforms. Most question issues are
+closed without an answer on this issue tracker. Thanks for your understanding.
+-->
diff --git a/.github/labeler.yml b/.github/labeler.yml
@@ -0,0 +1,80 @@
+module:cluster:
+- sklearn/cluster/**/*
+
+module:common:
+- sklearn/common/**/*
+
+module:compose:
+- sklearn/compose/**/*
+
+module:covariance:
+- sklearn/covariance/**/*
+
+module:cross_decomposition:
+- sklearn/cross_decomposition/**/*
+
+module:datasets:
+- sklearn/datasets/**/*
+
+module:decomposition:
+- sklearn/decomposition/**/*
+
+module:ensemble:
+- sklearn/ensemble/**/*
+
+module:feature_extraction:
+- sklearn/feature_extraction/**/*
+
+module:feature_selection:
+- sklearn/feature_selection/**/*
+
+module:gaussian_process:
+- sklearn/gaussian_process/**/*
+
+module:impute:
+- sklearn/impute/**/*
+
+module:inspection:
+- sklearn/inspection/**/*
+
+module:linear_model:
+- sklearn/linear_model/**/*
+
+module:manifold:
+- sklearn/manifold/**/*
+
+module:metrics:
+- sklearn/metrics/**/*
+
+module:mixture:
+- sklearn/mixture/**/*
+
+module:model_selection:
+- sklearn/model_selection/**/*
+
+module:naive_bayes:
+- sklearn/naive_bayes.py
+
+module:neighbors:
+- sklearn/neighbors/**/*
+
+module:neural_network:
+- sklearn/neural_network/**/*
+
+module:pipeline:
+- sklearn/pipeline.py
+
+module:preprocessing:
+- sklearn/preprocessing/**/*
+
+module:semi_supervised:
+- sklearn/semi_supervised/**/*
+
+module:svm:
+- sklearn/svm/**/*
+
+module:tree:
+- sklearn/tree/**/*
+
+module:utils:
+- sklearn/utils/**/*
diff --git a/.github/workflows/assign.yml b/.github/workflows/assign.yml
@@ -0,0 +1,16 @@
+
+name: Assign
+on:
+  issue_comment:
+    types: created
+
+jobs:
+  one:
+    runs-on: ubuntu-latest
+    steps:
+    - if: github.event.comment.body == 'take'
+      name:
+      run: |
+        echo "Assigning issue ${{ github.event.issue.number }} to ${{ github.event.comment.user.login }}"
+        curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -d '{"assignees": ["${{ github.event.comment.user.login }}"]}' https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/assignees
+        curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -X "DELETE" https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/labels/help%20wanted
diff --git a/.github/workflows/labeler.yml b/.github/workflows/labeler.yml
@@ -0,0 +1,14 @@
+name: "Pull Request Labeler"
+on:
+  schedule:
+    - cron: "*/10 * * * *"
+
+jobs:
+  triage:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: thomasjpfan/labeler@v2.4.6
+      if: github.repository == 'scikit-learn/scikit-learn'
+      with:
+        repo-token: "${{ secrets.GITHUB_TOKEN }}"
+        max-labels: "3"
diff --git a/.github/workflows/twitter.yml b/.github/workflows/twitter.yml
@@ -0,0 +1,26 @@
+# Tweet the URL of a commit on @sklearn_commits whenever a push event
+# happens on the master branch
+name: Twitter Push Notification
+
+
+on:
+  push:
+    branches:
+      - master
+
+
+jobs:
+  tweet:
+    name: Twitter Notification
+    runs-on: ubuntu-latest
+    steps:
+      - name: Tweet URL of last commit as @sklearn_commits
+        if: github.repository == 'scikit-learn/scikit-learn'
+        uses: xorilog/twitter-action@0.1
+        with:
+          args: "-message \"https://github.com/scikit-learn/scikit-learn/commit/${{ github.sha }}\""
+        env:
+          TWITTER_CONSUMER_KEY: ${{ secrets.TWITTER_CONSUMER_KEY }}
+          TWITTER_CONSUMER_SECRET: ${{ secrets.TWITTER_CONSUMER_SECRET }}
+          TWITTER_ACCESS_TOKEN: ${{ secrets.TWITTER_ACCESS_TOKEN }}
+          TWITTER_ACCESS_SECRET: ${{ secrets.TWITTER_ACCESS_SECRET }}
diff --git a/.github/workflows/unassign.yml b/.github/workflows/unassign.yml
@@ -0,0 +1,14 @@
+name: Unassign
+#Runs when a contributor has unassigned themselves from the issue and adds 'help wanted' and 'stalled' tags
+on:
+  issues:
+    types: unassigned
+
+jobs:
+  one:
+    runs-on: ubuntu-latest
+    steps:
+      - name:
+        run: |
+          echo "Marking issue ${{ github.event.issue.number }} as stalled"
+          curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -d '{"labels": ["help wanted","Stalled"]}' https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/labels
diff --git a/.landscape.yml b/.landscape.yml
diff --git a/CODE_OF_CONDUCT.md b/CODE_OF_CONDUCT.md
@@ -0,0 +1,16 @@
+# Code of Conduct
+
+We are a community based on openness and friendly, didactic, discussions.
+
+We aspire to treat everybody equally, and value their contributions.
+
+Decisions are made based on technical merit and consensus.
+
+Code is not the only way to help the project. Reviewing pull requests,
+answering questions to help others on mailing lists or issues, organizing and
+teaching tutorials, working on the website, improving the documentation, are
+all priceless contributions.
+
+We abide by the principles of openness, respect, and consideration of others of
+the Python Software Foundation: https://www.python.org/psf/codeofconduct/
+
diff --git a/COPYING b/COPYING
@@ -1,6 +1,6 @@
 New BSD License
 
-Copyright (c) 2007–2019 The scikit-learn developers.
+Copyright (c) 2007–2020 The scikit-learn developers.
 All rights reserved.
 
 

diff --git a/MANIFEST.in b/MANIFEST.in
@@ -5,3 +5,4 @@ recursive-include sklearn *.c *.h *.pyx *.pxd *.pxi *.tp
 recursive-include sklearn/datasets *.csv *.csv.gz *.rst *.jpg *.txt *.arff.gz *.json.gz
 include COPYING
 include README.rst
+include pyproject.toml