Population Genetics in Julia

An Open Source Program that allows users to interact with a Spacecraft in a lab environment, pre-launch.

PERF is an Exhaustive Repeat Finder

strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.

Microsatellite genotyping

Computational, High-throughput Individual Identification through Microsatellite Profiling

De novo repeat inference from long reads

Looper is an ultrafast DNA tandem repeat identification tool which works on basic arithmetic rules.

Supporting code for the microsatellite genotyping paper introducing CHIIMP

A macOS application for microsatellite genotyping using capillary sequencing data.

Dockerized BEASTvntr : a package for BEAST2 implementing phylogenetic analysis for VNTR or Microsatellites

Python code to convert STR length data to number of repetitions

This repository contains all input files and analyses for the article "No effects of fishery collapse on the genetic diversity of the Gulf of California Corvina, Cynoscion othonopterus (Perciformes: Sciaenidae)"

Application for polymorphic SSRs loci identification in genomic sequences

Population genetics using microsatellites for different salmonid species

Ensembl VEP plugin that generates HGVS notation for Short Tandem Repeats (STR)

Dockerized lobSTR: a short tandem repeat profiler for next generation sequencing data