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GEOPHYSICAL RESEARCH LETTERS, VOL. 35, L12602, doi:10.1029/2008GL034081, 2008
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A coastal ocean extreme bloom incubator
John P. Ryan,1 James F. R. Gower,2 Stephanie A. King,2 W. Paul Bissett,3
Andrew M. Fischer,1 Raphael M. Kudela,4 Zbigniew Kolber,1 Fernanda Mazzillo,4
Erich V. Rienecker,1 and Francisco P. Chavez1
Received 21 March 2008; revised 9 May 2008; accepted 15 May 2008; published 19 June 2008.
[1] Novel remote sensing methods and in situ observations
reveal that intense dinoflagellate blooms occur frequently in
Monterey Bay, California. Blooms can contain surface
chlorophyll concentrations exceeding 500 mg l 1 and
occupy 5 to 80 km2. They occur primarily during
August through November and can persist for > 1 month.
Maximum bloom frequency and mean intensity are in a
shallow (< 25 m depth) area of the northeastern bay, in
coincidence with the warmest surface water, low wind
stress, and retentive circulation. These conditions favor
dinoflagellates, which can vertically migrate to acquire
nutrients in the thermocline and aggregate as "red tide" near
the surface. Bloom incubation areas, also indicated in other
coastal upwelling systems, may disproportionately
influence regional bloom ecology. Citation: Ryan, J. P.,
J. F. R. Gower, S. A. King, W. P. Bissett, A. M. Fischer, R. M.
Kudela, Z. Kolber, F. Mazzillo, E. V. Rienecker, and F. P. Chavez
(2008), A coastal ocean extreme bloom incubator, Geophys. Res.
Lett., 35, L12602, doi:10.1029/2008GL034081.
1. Introduction
[2] Dense accumulations of phytoplankton that imbue the
surface ocean with reddish color, commonly called ‘‘red
tides’’, are one type of extreme bloom that can negatively
affect ecosystems and human health [Anderson, 1995;
Glibert et al., 2005; Kudela et al., 2005]. Increasing global
occurrence of harmful algal blooms (HABs) motivates
improved understanding of natural and human influences
on bloom location, frequency and severity [Hallegraeff,
2003]. Approximately 50% of all red tide forming species
and 75% of all HAB species are dinoflagellates [Sournia,
1995; Smayda, 1997]. Where phytoplankton growth is
limited by low surface nutrient concentrations, and stratification impedes renewal of surface nutrients by turbulent
vertical mixing, dinoflagellate motility provides a competitive advantage because their populations can migrate
downward at night to acquire nutrients [Cullen and
Horrigan, 1981; Heaney and Eppley, 1981]. When these
populations migrate up to the surface for photosynthesis
during the day, their dense aggregations produce strong biooptical signals that are detectable by satellite and airborne
remote sensing.
1
Monterey Bay Aquarium Research Institute, Moss Landing, California,
USA.
2
Institute of Ocean Sciences, Sidney, British Columbia, Canada.
3
Florida Environmental Research Institute, Tampa, Florida, USA.
4
Department of Ocean Sciences, University of California, Santa Cruz,
California, USA.
Copyright 2008 by the American Geophysical Union.
0094-8276/08/2008GL034081$05.00
[3] Studies have documented intense dinoflagellate red
tide blooms in Monterey Bay (MB), including species
known to cause harm [Ryan et al., 2005; Donaghay et al.,
2006; Kudela et al., 2008; Curtiss et al., 2008; J. P. Ryan et
al., Influences of upwelling and downwelling winds on red
tide bloom dynamics in Monterey Bay, California, submitted to Continental Shelf Research, 2008]. Here we apply
unprecedented time-series of remote sensing and in situ data
to identify and describe an ‘‘extreme bloom incubator’’ in
an area of MB, and to examine conditions and processes
underlying this phenomenon.
2. Data and Methods of Analysis
[4] Quantifying extreme bloom intensity and distributions using remote sensing requires measurement of the
near-infrared (NIR) peak in upwelling radiance caused by
such blooms [Gower et al., 2005; Dierssen et al., 2006].
Only one multi-spectral satellite sensor, MERIS (Medium
Resolution Imaging Spectrometer), has been designed to
measure NIR signal for computation of an extreme bloom
index, termed the Maximum Chlorophyll Index (MCI)
[Gower et al., 2005; Gower and King, 2007]. We apply
MCI images to illustrate synoptic bloom patterns and
compute long-term statistics. The MCI image archive was
screened to eliminate images having questionable signal
(near cloud edges, steep view angles), producing 75 good
images from August through November of 2002 – 2007. Of
these images, 31 were full resolution (300 m), and 44 were
reduced resolution (1200 m).
[5] Defining blooms as MCI > 0.3, corresponding to
chlorophyll exceeding 75 mg l 1 (unpublished results
from model described by Gower et al. [2005]), we computed indices of bloom probability (detection frequency)
and mean intensity. Maps of bloom statistics were constrained to well sampled pixels (at least 80% of the
maximum possible sample count). Illustration of average
bloom intensity was constrained to pixels for which a
representative mean could be calculated (bloom frequency
at least 25% of the maximum frequency).
[6] To examine MCI statistics relative to oceanographic
and meteorological conditions, we computed mean sea
surface temperature (SST) and surface wind stress. SST
images were from the MODIS (Moderate Resolution Imaging Spectroradiometer) satellite sensor for August through
November of 2002 – 2007; details of MODIS image processing are in work by Ryan et al. [2008, submitted
manuscript, 2008]. Surface wind stress data was from the
COAMPS (Coupled Ocean/Atmosphere Mesoscale Prediction System) high-resolution (3-km, 12-hour) model of
central California for August through November 2006.
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Figure 1. Remote sensing images of extreme blooms in Monterey Bay, California. In all images, red color indicates
extreme ‘‘red tide’’ bloom patches. (a – f) Full-resolution (300 m) images of the Maximum Chlorophyll Index (MCI) from
MERIS. (g – i) NIR-G-B composite images from hyperspectral airborne remote sensing of the NE bay. Figures 1g and 1i are
from PHILLS (2 m resolution); Figure 1h is from AVIRIS (17 m resolution).
[7] Hyperspectral imaging spectrometers effectively measure the NIR reflectance peak of extreme blooms. We
present NIR-G-B composite images from the AVIRIS
(Airborne Visible-Infrared Imaging Spectroradiometer) and
PHILLS (Portable Hyperspectral Imager for Low Light
Spectroscopy) sensors, using channels centered at {711,
549, 462} and {708, 540, 458} nm, respectively. Details of
the sensors and data processing are in work by Davis et al.
[2002] and Ryan et al. [2005].
[8] To describe water column structure in the bloom
environment, we analyzed vertical sections mapped by an
autonomous underwater vehicle (AUV) between the inner
shelf region of extreme bloom development and outer MB.
Details of AUV sensors and sampling are in work by Ryan
et al. [2008, submitted manuscript, 2008]. From 21 surveys
during August through November of 2003 – 2007, we computed mean hydrographic sections. Valid means were constrained to well-sampled grid points (> 80% of maximum
possible sample count).
[9] During September 2007 the bloom environment was
intensively studied. To track the movement of shallow
waters in which dinoflagellates aggregate, we deployed
satellite-tracked drifters drogued between 1 and 2 m depth.
To map small-scale variability in the bloom region, we
surveyed with a flow-through mapping system drawing
water from 2 m depth and measuring temperature and
salinity (SeaBird 45 thermosalinograph), chlorophyll fluorescence and the maximum quantum yield [Kolber et al.,
1998]. Phytoplankton samples included surface wholewater samples, preserved in 1% glutaraldehyde, and concentrated surface net tows (35 mm mesh), preserved in 4%
formaldehyde; samples were kept in the dark at 4°C. Whole
water samples were filtered through 5mm polycarbonate
black filters and DAPI stained. Filters were mounted on
slides with immersion oil, and cell identification and counts
were performed using epifluorescence microscopy. Relative
abundances of species were also estimated from net tow
samples.
3. Results
[10] Shown in Figure 1 are images of extreme blooms in
MB. The MCI images (Figures 1a – 1f) show bloom scales
from 5 km2 (Figure 1c) up to 80 km2 (Figure 1f).
Extracted surface chlorophyll concentrations measured during blooms in 2006 (Figure 1e) and 2007 (Figure 1f)
exceeded 500 mg l 1. The full MCI archive shows that
extreme blooms are limited primarily to the annual period of
August through November. The large 2007 bloom
(Figure 1f) persisted from early October to mid-November.
These examples, as well as the full archive, exhibit a
preponderance of extreme blooms in the northeastern bay.
High-resolution airborne imaging spectrometry emphasizes
the patchiness of extreme blooms (Figures 1g – 1i) and
illustrates small-scale physical processes influencing bloom
distributions (e.g. eddy in Figure 1i).
[11] Indices of extreme bloom probability and mean
intensity show the prevalence of intense blooms in the NE
bay, in waters shallower than 25 m (Figures 2a and 2b).
Except for a thin border along the coast, the entire bay was
well sampled, so most of the bay is accurately described by
low to zero probability of extreme bloom detection. The NE
bay, where bloom probability and mean intensity are high-
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relatively strong gradients in temperature and salinity
(Figures 4c and 4d). The highest dinoflagellate abundance
was in the sample nearest the chlorophyll peak (Figure 4a).
Ceratium cf. divaricatum was dominant. Akashiwo sanguinea, Ceratium furca, Ceratium cf. lineatum, Cochlodinium
cf. fulvescens and Preperidinium sp. were common. Alexandrium catenella, Prorocentrum gracilis, Oxyphysis oxytoides, Dinophysis sp., and Gonyaulax sp. were present but
not abundant.
4. Discussion
Figure 2. Bloom statistics and relevant oceanic and
atmospheric conditions. (a) bloom probability (detection
frequency); (b) mean bloom intensity; (c) sea surface
temperature (SST) and wind stress; (d) retention of red tide
shown with 9/25/2007 MODIS true color image and 9/25 to
9/28 2007 drifter tracks (white dots). AUV transect
(Figure 2a) data are in Figure 3.
est, exhibits the warmest mean SST and minimum average
wind stress (Figure 2c).
[12] In the area of highest mean MCI (Figure 2b), drifter
studies demonstrated retention of a bloom. On September
25, 2007, remote sensing and in situ observation showed the
presence of an intense surface bloom in the NE bay (reddish
color in Figure 2d). Drifters released within the bloom
remained in the same area for 3 days (Figure 2d). In
contrast, MODIS images indicated that nearshore waters
of the northern bay, south of where the drifters showed
retention, were entrained out of the bay by an eddy
(Figure 2d and concurrent SST and chlorophyll fluorescence
line height which are not presented).
[13] The increases in bloom probability and mean intensity toward the coast (Figure 3a) correspond with thermal
stratification of a shallow warm lens having the highest
oxygen and lowest nitrate concentrations (Figure 3b).
Relatively high salinity waters shoal toward the coast and
extend into the thermocline below the warm lens (Figure 3b).
[14] A dense red tide patch in the NE bay, where mean
MCI is highest (Figure 2b), exhibited not only high chlorophyll and reddish coloration, but also high maximum quantum yield (Figures 4a and 4b), indicating a healthy
population. The patch was within a frontal zone, defined by
[15] Monterey Bay is the largest open embayment along
the U.S. west coast, and an area of the bay is the site of
frequent extreme blooms, particularly between August and
November. New remote sensing techniques permitted this
discovery and provided the impetus for closer study of this
ecologically significant area. The strong bio-optical signal
of these blooms is due to dense surface aggregations of
phytoplankton. Dinoflagellates that most often bloom in
MB, including Akashiwo, Cochlodinium and Ceratium
[Ryan et al., 2005; Kudela et al., 2008; Ryan et al.,
submitted manuscript, 2008], were abundant in the
diversely populated bloom patch sampled in this study.
These dinoflagellates are known to exhibit strong vertical
migratory behavior and aggregate near the surface [Blasco,
1978; Park et al., 2001; Donaghay et al., 2006].
[16] Observed conditions that would favor dinoflagellate
blooms include relatively strong thermal stratification, locally enhanced nutrient supply in the thermocline, low wind
stress, and retentive inner shelf circulation. As illustrated by
studies in NE Monterey Bay, highly motile dinoflagellates
like Akashiwo can effectively migrate into the thermocline
daily to acquire nutrients [Donaghay et al., 2006]. Relatively high salinity in the thermocline beneath the bloom
area presumably indicates relatively high nutrient supply,
while low nitrate and high oxygen concentrations indicate
Figure 3. Mean water column structure underlying the
extreme bloom region along the repeated AUV transect
(location in Figure 2a). (a) bloom probability and mean
intensity; (b) mean water column patterns: temperature (solid
contours), salinity (gray shaded area labeled S is > 33.5 psu),
nitrate (gray shaded area labeled N is nitrate < 4 mM), and
oxygen (area above dotted contour is > 6.25 ml l 1).
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Figure 4. In situ mapping of a red tide bloom on September 19, 2007. (a) Calibrated fluorometric chlorophyll (color) and
dinoflagellate cell counts at sampling stations (bars, numbers indicate cell counts x 105 liter 1); (b) maximum quantum
yield (Fv/Fm); (c) temperature; (d) salinity.
relatively high nutrient utilization and productivity. Low
wind stress in the NE bay promotes stratification that favors
dinoflagellates and minimizes dispersal of surface aggregations by wind-driven turbulent vertical mixing. Retentive
circulation minimizes dispersal by lateral advection. The
bloom retention we observed in the NE bay was adjacent to
eddy-forced export of waters from another part of the
northern bay, and it occurred during a period of upwelling
favorable winds (not shown). This is distinct from the
retentive recirculation pattern described for the entire northern bay during periods of upwelling [Graham and Largier,
1997], and it emphasizes the need for studying very nearshore circulation patterns to understand bloom dynamics.
[17] Where favored by environmental conditions, dense
dinoflagellate populations would have an advantage in
utilizing periodic nutrient influx. The primary natural nutrient sources to MB are upwelling filaments [Rosenfeld et al.,
1994] and internal tidal pumping from Monterey Canyon
[Shea and Broenkow, 1982]. Shelf bathymetry may also
influence nutrient transport and coupling to benthic nutrient
processes. The shallow shelf area of the northern bay, where
the blooms are prevalent, is much larger than that in the
southern bay. Because the MB extreme bloom season
overlaps with the rainy season, fluxes of nutrients and
freshwater (stratification) from land drainage may at times
be important to bloom dynamics. Drifter studies during fall
and winter show that riverine and estuarine plumes in the
central bay predominantly flow northward into the region
where extreme blooms are most frequent and intense (A. M.
Fischer, The structure, composition, and dynamics of a
central California estuarine discharge plume, manuscript
in preparation, 2008). The roles of oceanographic and
land-sea nutrient supply in this region require further study.
[18] Concentration of blooms through biological-physical
interactions is also indicated. Intense red tide aggregations
have been observed at convergent fronts in MB [Ryan et al.,
2005, submitted manuscript, 2008], and the in situ survey
presented here showed a bloom patch in a frontal zone.
These observations are consistent with concentration of
upward-swimming populations in the downwelling zone
of horizontally convergent flow.
[19] Process studies show that dense blooms in NE
Monterey Bay can seed larger blooms [Ryan et al., 2005;
Kudela et al., 2008; Rienecker et al., 2008; Ryan et al.,
submitted manuscript, 2008]. By promoting frequent development of extreme blooms, this area of the California coast
may exert a disproportionately large influence on adjacent
coastal regions. Drifter studies show that when upwelling
favorable winds relax/reverse, the shallow waters of the NE
bay can be rapidly flushed out of the bay and up the coast
[Ryan et al., 2008, unpublished data, 2006, 2007]. Similar
‘‘bloom incubators’’ are indicated by observations from
regions of other coastal upwelling systems, including northern San Luis Obispo Bay, California (M. Moline, personal
communication, 2008), Lisbon Bay, Portugal [Moita et al.,
2006], Paracas Bay, Peru [Kahru et al., 2004], and St.
Helena Bay, South Africa [Pitcher and Nelson, 2006;
Fawcett et al., 2007]. Understanding incubator regions is
important to understanding red tide and HAB ecology of the
larger marine ecosystems in which they reside.
[20] Acknowledgments. The David and Lucile Packard Foundation
funded MBARI field operations and MBARI co-author efforts. We thank
MBARI AUV and R/V Zephyr personnel, and G. Friederich and M. Suro
for assistance with drifters. The European Space Agency provided MERIS
data; MERIS data processing was funded by Fisheries and Oceans Canada
and the Canadian Space Agency. MODIS Level 1 data were provided by
the LAADS data system, and data processing was enabled by the NASA
SeaDAS team and the MODIS Ocean Biology Processing Group. AVIRIS
airborne remote sensing was supported by NASA grant NAG5-12692.
PHILLS airborne remote sensing, data processing and data management
were supported by the NOAA CICORE and MERHAB Programs (grant
NA05NOS4781220), and by ONR. COAMPS atmospheric model results
were provided by FNMOC.
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W. P. Bissett, Florida Environmental Research Institute, 10500 University
Drive, Suite 140, Tampa, FL 33612, USA.
F. P. Chavez, A. M. Fischer, E. V. Rienecker, J. P. Ryan, and Z. Kolber,
Monterey Bay Aquarium Research Institute, P.O. Box 628, 7700 Sandholdt
Road, Moss Landing, CA 95039, USA. (ryjo@mbari.org)
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