Download MendeleyHigh Resolution Structure of the Manganese Derivative of Insulin
Prugovecki, B., Pulic, I., Toth, M., Matkovic-Calogovic, D.(2012) Croat Chem Acta 85: 435-439
4FKA | pdb_00004fka
High resolution structure of the manganese derivative of insulin
- PDB DOI: https://doi.org/10.2210/pdb4FKA/pdb
- Classification: HORMONE
- Organism(s): Homo sapiens
- Mutation(s): No
- Deposited: 2012-06-13 Released: 2013-02-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.08 Å
- R-Value Free: 0.194 (Depositor), 0.180 (DCC)
- R-Value Work: 0.159 (Depositor), 0.150 (DCC)
- R-Value Observed: 0.161 (Depositor)
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by: Sequence | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Insulin A chain | 21 | Homo sapiens | Mutation(s): 0 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01308 (Homo sapiens) Explore P01308 Go to UniProtKB: P01308 | |||||
PHAROS: P01308 GTEx: ENSG00000254647 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P01308 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Insulin B chain | 30 | Homo sapiens | Mutation(s): 0 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01308 (Homo sapiens) Explore P01308 Go to UniProtKB: P01308 | |||||
PHAROS: P01308 GTEx: ENSG00000254647 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P01308 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MN Query on MN | F [auth B], G [auth D] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |  | ||
| NA Query on NA | E [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.08 Å
- R-Value Free: 0.194 (Depositor), 0.180 (DCC)
- R-Value Work: 0.159 (Depositor), 0.150 (DCC)
- R-Value Observed: 0.161 (Depositor)
Space Group: H 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 81.7 | α = 90 |
| b = 81.7 | β = 90 |
| c = 33.73 | γ = 120 |
| Software Name | Purpose |
|---|---|
| AMoRE | phasing |
| REFMAC | refinement |
| MOSFLM | data reduction |
| SCALA | data scaling |
Entry History
Deposition Data
- Released Date: 2013-02-13 Deposition Author(s): Prugovecki, B., Pulic, I., Toth, M., Matkovic-Calogovic, D.
Revision History (Full details and data files)
- Version 1.0: 2013-02-13
Type: Initial release - Version 1.1: 2023-09-13
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.2: 2024-11-20
Changes: Structure summary
