Organic Chemistry - Lesson 2
Organic Chemistry - Lesson 2
Organic Chemistry - Lesson 2
Structural isomers:
Different compounds; all properties
like boiling points, melting points,
and solubilities are different
Geometrical isomers:
Different compounds; all properties
like boiling points, melting points,
and solubilities are different
They interact differently with polarized light. These are called optical isomer
Isomerism of Organic Molecules: Optical activity
Polarized light
Achiral Molecule: does not rotate the plane of the polarized light
A compound that does not rotates the plane of polarization is said to be optically
inactive.
superimposable
nonsuperimposable
Carbon is called
asymmetric carbon
or chiral center
Chiral Molecule Achiral Molecule
Cahn, Ingold, and Prelog devised R,S System of Nomenclature to indicate the
configuration (arrangement) of the atoms or groups about the asymmetric carbon.
pair of enantiomers with one asymmetric carbon, one will have the R configuration
and the other will have the S configuration.
Isomerism of Organic Molecules: R,S Nomenclature
1. Rank the groups (or atoms) bonded to the asymmetric carbon in order of
priority. The atomic numbers of the directly attached to the asymmetric carbon
determine the relative priorities.
The higher the atomic number, the higher the priority.
2. If the two substituents bonded to the asymmetric carbon start with the same
atom (there is a tie), you must move outward from the point of attachment and
consider the atomic numbers of the atoms that are attached to the tied atoms.
Isomerism of Organic Molecules: R,S Nomenclature
4. If two atoms have substituents of the same priority, higher priority is assigned
to the atom with more of these substituents.
Isomerism of Organic Molecules: R,S Nomenclature
A larger group (i.e., more atoms) may not necessarily have a higher priority over
another (smaller) group.
5. In the case of isotopes (atoms with the same atomic number, but different
mass numbers), the mass number is used to determine the relative priorities.
CHD has higher priority than CH2
Example:
(1) (1)
(2) (2)
(4) (4)
(3) (3)
Isomerism of Organic Molecules: R,S Nomenclature
Draw a curved arrow from 1 to 2 to 3 and back to 1 and note which direction this
arrow goes, clockwise (cw) or counterclockwise (ccw)
If the lowest priority group in behind the plane of the molecule, clockwise is R
and counter-clockwise is S
If the lowest priority group is in front of the plane of molecule, then the
assignment is reversed: clockwise is S and counterclockwise is R
(1) (1)
S R
(2) (2)
(4) (4)
(3) (3)
Counterclockwise
lowest priority group is behind of the plane clockwise
lowest priority group is behind of the plane
Isomerism of Organic Molecules: R,S Nomenclature
Isomerism of Organic Molecules: Specific rotation
optically active compound will rotate the plane of polarization
Observed rotation () is
measured in degrees.
The observed rotation depends on the concentration of the sample and the length
of the sample tube. The observed rotation also depends on the temperature,
the wavelength of the light source and solvent.
= + 1.74/(0.2 X 1) = + 8.7
R or the S configuration does not tell us the direction the compound rotates
the plane of polarization
For some compounds with the R configuration rotate the plane to the right
and some rotate the plane to the left
If the mixture contain one of the enantiomer in excess to other, the mixture will
show optical activity
(-)-2-butanol has a specific rotation of - 13.5o while the specific rotation of (+)-2- butanol is
+13.5o. Calculate the optical purity of a mixture containing (+) and (-)-2-butanol if the
mixture has an observed rotation of 8.10o.
Optical Isomerism:
compounds with more than one chiral center
importance of chirality
conformation vs configuration
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