Harken, James
Harken, James
Harken, James
OBJECT-ORIENTED CLASSIFICATION
An Abstract of a Thesis
Submitted
In Partial Fulfillment
Master of Arts
James Harken
July 2004
ABSTRACT
Wetlands are transitional lands between terrestrial and aquatic systems that
wildlife habitat, and soil-erosion control. Wetlands in Iowa have decreased over 95% in
the last 200 years. Therefore, there is a need to map and monitor these resources, as well
as to determine potential sites for wetland restoration. In Black Hawk County, wetland
maps are outdated, and ground surveys have proved to be too time-consuming and
This study tests multispectral data, hybrid data, hyperspectral data, a seasonal matrix, and
a new object-oriented classifier. These are tested against traditional multispectral, pixel-
an updated wetlands map for Black Hawk County. A hyperspectral image of Eddyville,
Iowa is tested to evaluate how well wetlands are classified when a hyperspectral image is
This study shows that the object-oriented classifier is more accurate in identifying
wetlands and overall land-cover than pixel-based ones (ISO DATA, Maximum-
1983 to 2003. The restoration model identified 2,971 acres in Black Hawk County as
being highly suitable, 34,307 acres as being moderately suitable, and 121,271 acres as
having low suitability for wetland restoration. The results are available at http://gisrl-
Limitations of the study include file size when using the object-oriented classifier,
image availability for the seasonal matrix, and the number of variables employed in the
GIS-based restoration model. The future direction of the study lies in obtaining
hyperspectral data for Black Hawk County, more current Landsat multispectral imagery
for the seasonal matrix, and testing of more non-parametric classifiers, such as the CART
algorithm.
MAPPING WETLANDS AND POTENTIAL WETLAND RESTORATION AREAS
OBJECT-ORIENTED CLASSIFICATION
A Thesis
Submitted
In Partial Fulfillment
Master of Arts
James Harken
July 2004
11
('
.-,of-----4
Dr. Ramanathan Sugumaran, Chair, Thesis Committee
'//z-1/JJ.J> c.,
Date Dr. Tim Strauss, Thesis Committee Member
ACKNOWLEDGEMENTS
Consortium for providing funding for the initial part of my research, all of the Geography
faculty at the University of Northern Iowa, and especially my committee members of Dr.
Sugumaran, Dr. May, and Dr. Strauss. I would also like to thank Steve Finegan of the
Black Hawk County Conservation Board, Barb Berquam and Kim Veeder from the Black
Hawk County GIS office, and Pete Kollasch from the Iowa Department of Natural
Resources, for their feedback and advice, especially during the beginning phases of the
research.
iv
TABLE OF CONTENTS
PAGE
LIST OF TABLES ...... ......... ...... .. ........ ...... .... .............. .............. ................................ vi
CHAPTER I. INTRODUCTION................................................................................ 1
Research Questions.......................................................................................... 7
CHAPTER IL LITERATURE REVIEW ..... .... .. .. .. .. ... .. .. ... .. .. ...... .. .... .. .... .. .... .. ... ..... .. 9
Study Area 23
Data Used 23
PAGE
Multi spectral Landsat ETM Classification .. ..... .. .. ..... .. .. .. .. .. .. ... .... .. ..... ...... .. ... . 44
CHAPTER V. CONCLUSION................................................................................... 63
REFERENCES ............................................................................................................ 67
APPENDIX: MAPS..................................................................................................... 75
Vl
LIST OF TABLES
TABLE PAGE
LIST OF FIGURES
FIGURE PAGE
12 Results from CASI Hyperspectral Image Classification .......... .. ... .. ... ...... ..... ... 51
13 Wetlands Change in Black Hawk County .. ... ..... .. ... .. ...... .. .. .... ... ... .. ...... ........ .. . 59
INTRODUCTION
(I 979) provide the official federal definition of wetlands: "Wetlands are lands transitional
between terrestrial and aquatic systems where the water table is usually at or near the
surface or the land is covered by shallow water" (p.1 ). Other definitions include
"Wetlands are a mix of characteristics from terrestrial or upland areas and the
characteristics of aquatic or water environments" (Lyon, 1993, p. 7), " ... places where
plants and animals live amid standing water or saturated soils, also called swamps,
sloughs, marshes, bogs, fens, seeps, oxbows, shallow ponds, or wet meadows" (Cohen,
2001, p. 1), and the US Army Corp of Engineers Wetlands Delineation manual: "Those
areas that are inundated or saturated by surface or ground water at a frequency and
There are several wetland classifications available in the literature. One of the
most important is defined by the U.S. Fish and Wildlife Service which classifies wetlands
into five types: Palustrine (non-tidal freshwater habitats and open water less than 20
acres), Estuarine (deep water tidal habitats), Marine, Lacustrine (open water greater than
20 acres), and Riverine, defined as freshwater rivers and streams; (Dahl, 2000). All of
these wetland categories must have one or more of the following three attributes: (a) at
least periodically, the land supports predominately hydrophytes; (b) the substrate is
2
predominantly undrained and hydric (soil that has developed anaerobic conditions); and
(c) the substrate is nonsoil and is saturated with water or covered by shallow water at
some time during the growing season of each year. A pictorial representation of two
Hydrology
• Dry----.i<lf- Intermittently to ~14---Permanently flooded •
permanently flooded
Terrestrial Wetland
system
I-- l __ l -
Hydrology
- -- Ground water -- -
• Dry ---t->1<1-- Intermittently to ~
permanently flooded
Wetlands compromise only 3 to 6% of the earth's land surface area, but they
provide human populations with a host of goods and services, including food storage,
water quality maintenance, agricultural production, fisheries, and recreation (Acreman &
Hollis, 1996). They are critical to flood protection, and act like sponges to soak up water
and release it slowly. Although most wetlands store an average of approximately three
feet of water, a single acre of wetland can store up to five feet, or 1.66 million gallons of
flood water (Sierra Club, 2000). Wetlands are also believed to play a significant role in
methane and a sink for both carbon (wetlands contain 15-22% of the world's soil carbon
pool), nitrogen, and methane (Takeuchi, Tamura, & Yasuoka, 2003; Trettin, Song,
Jurgensen, & Li, 2001). Global biodiversity is also enhanced by wetlands because they
are vital for the survival of a disproportionately large number of threatened and
endangered species (Mitch & Gosselink, 2000). Wetlands have become a popular way
for treating contaminated surface and wastewaters, and are particularly suited for treating
non-point pollution, such as agricultural and urban runoff (Dierberg, DeBusk, Jackson,
Chimeny, & Pietro, 2002). They can also lessen soil erosion, and moderate stream
temperature (critical for certain species survival like trout, Budlong, 2002). Lastly,
wetlands have been found to preserve archeological remains (Chapman & Cheetham,
2002).
Despite these proven advantages, wetland conversion to other land uses has been
a problem historically and continues to the present day. However, the last few decades
4
at the time of European settlement, the continental United States contained an estimated
221 million acres (89 .5 million hectares) of wetlands, or 9% of the total surface area.
Over time, wetlands have been drained, dredged, filled, leveled, and flooded to the extent
that less than half of the original acreage remains (Dahl, 1990; Whittecar & Daniels,
1999).
development and agriculture. In less than 150 years, these rich resources were drained,
filled, or otherwise altered, drastically changing the face of Iowa's land. Similar
percentages are given concerning the amount of wetland losses in Iowa. One study
places the loss at 95% (Arbuckle & Pease, 1999) and another 90%-95% (Cohen, 2001).
In a mandated report to Congress by the U.S. Fish and Wildlife Service, only two other
states showed higher wetlands losses than Iowa: California and Ohio (Dahl, 1990).
According to the Iowa Department of Land Stewardship [IDALS] ( 1998), the amount of
wetlands six years ago covered only 1.2% of Iowa's surface area, compared to 11% two-
1.20%
01803
@J 1997
11%
This is a loss of approximately 3.5 million acres, or an area approximately the size
of the state of Connecticut. The reduction of wetlands in Iowa has also contributed to the
fact that Black Hawk, Hamilton, Johnson, Linn, Story, and Tama counties were
designated federal (flood) disaster areas five times from 1989-1998 (Sierra Club, 2000)
and all of Iowa's 99 counties were designated federal (flood) disaster areas at least once
The loss of these critical resources (wetlands) in Iowa with some 92% of the land
being used for agriculture (Dung, 2003), and their documented value, shows an urgent
need to monitor these resources, measure their changes, and provide a method for
using ground surveys. However, these surveys are difficult and time-consuming (Lyon,
Geographical Information Systems (GIS), and Global Positioning Systems (GPS) can
problems (Goldberg, 1998). In addition, remote sensing data can be used for the
6
following: (a) to detennine the extent of wetlands, (b) to identify the type of wetland
resource, (c) to characterize the general wetland land cover type, ( d) to identify
submergent and emergent wetlands, and (e) to supply details about the resource (Lyon &
McCarthy, 1995). Geographical Infonnation Systems and GPS can be used effectively
for natural resource management, conservation, and restoration (Konecny, 2003). This
includes inventorying and updating wetlands (Houhoulis & Michener, 2000). The need
to update the last wetlands survey undertaken for Black Hawk County (completed by the
National Wetland Inventory and Iowa Department of Natural Resources and based upon
aerial photos taken in 1983 and 1984), is the justification for this research.
one of the easiest and most quickly restored elements of natural landscape, and they can
provide nearly instantaneous wildlife habitat. The Wildlife Bureau offers technical
Program aimed at returning fonner wetland areas that have been cropped. The
Emergency Wetland Reserve Program also works to place pennanent easements on land
that has a flood history, returning it to wetland conditions. Wetland detennination and
compliance programs.
7
The main research goal is to map and identify potential wetland restoration areas
in Black Hawk County, Iowa using remote sensing and GIS technologies. To achieve
hyperspectral images;
3. Analyze different GIS wetland restoration models from the literature and
4. Disseminate the final results through the Internet via Arc Internet Map Server
(ArcIMS).
Research Questions
On the basis of the goal and objectives of the study, the research questions are as
follows:
4. What role does summer and fall seasonality play in wetland classification
5. What are the most important factors in a GIS-based wetland restoration model
CHAPTER2
LITERATURE REVIEW
The value of wetlands and their contributions to a healthy ecosystem have been
gaining increasing recognition over the past few decades as have the spectral and spatial
resolution ofremote-sensing satellites since Landsat was first launched in 1972. Along
with the increased power of geographical information systems, mapping and monitoring
indispensable tool for understanding these valuable resources and keeping wetland
inventories current. In Iowa 92% of the land is in agricultural use (the highest in the
nation) and Iowa ranks in the top three states in wetland losses (Dahl, 1990). Therefore,
restoration areas.
The literature compiled for this study is broken down into classification
models. The review is based on the most current studies published. Although the
2004) and availability of hyperspectral data give the chance to further research methods
(TM), and the French Systeme Pour !'Observation de la Terre (SPOT) satellite systems
have been used to study wetlands (Lunetta & Balogh, 1999; Shaikh, Green, & Cross,
2001; Shepard, Wilkinson, & Thompson, 2000; Toyra, Pietroniro, & Martz, 2000). Other
(AVHRR), the Indian Remote Sensing Program (IRS), the Japanese Earth Resources
Satellite (JERS-1), the European Remote-Sensing Satellite (ERS-1), the Shuttle Imaging
Radar (SIR-C), and lastly, the Canadian Radio Detection and Ranging Satellite,
RADARSAT (Alsdorf, Smith, & Melack, 2001; Bourgeau-Chavez et al., 2001; Chopra,
Verma, & Sharma, 2001). Some of the earliest work included visual interpretation of
method (Ozemi, 2000). To aid in the low wetland accuracy percentages that usually
ancillary data are often used along with various models to improve classification
accuracies. Ancillary data provide a practical solution to help solve the problem of
multispectral techniques. One limitation on the use of optical data for wetland mapping
11
is their inability to penetrate vegetation canopies, and thus their inability to remotely
sense flooding beneath a closed canopy (Bourgeau-Chavez et al., 2001). There has been
some research done on wetlands using radar data (Alsdorf et al., 2001; Bourgeau-Chavez
et al., 2001; Rio & Lozano-Garcia, 2000) as well as LIDAR (MacKinnon, 2001), but the
majority has been concentrated on Landsat TM, MSS, SPOT, and airborne Color Infrared
(CIR) photos.
shown mixed results. Jenssen and Middelkoop (1992) showed improvements of six to
twenty percent accuracies for crop cover classification of Landsat TM images over the
classification had the advantages of being quicker and requiring less field work. Sader,
Ahl, and Liou (1995) reported overall accuracies of 80% and 82% for wetlands in Maine
(in Orono and Acadia National Parks, respectively). Wetland producers accuracy in
Acadia National Park was determined to be 77% and wetlands users accuracy 62%. In
Orono National Park, wetlands producers accuracy was determined to be 66% and
wetland users accuracy 82%. Forested wetlands were emphasized in the study. Ozemi
(2000) noted that rule-based classifiers generally provide more accurate classification
results than the traditional maximum-likelihood method, but not always. In addition, she
noted that classification accuracies were much greater using two dates of imagery for
Landsat TM (leaf-on and leaf-off). This indicates that seasonal comparison of images for
12
wetland classification is probably needed. Hodgson, Jensen, Mackey, and Coulter (1987)
also indicated wetlands could be better defined on imagery acquired in spring when the
detection using National Wetlands Inventory and SPOT data for a study area in the Flint
River Basin in south-west Georgia. Their utilization of the modulus to reduce data
volume and provide spectral variability was added to the attribute table of the wetland
polygons along with majority land-cover attributes to determine the change criteria
(within one standard deviation). They also used a custom Arc Macro Language (AML)
script to determine thresholds and provided an accuracy assessment of over 10% of the
12,000 wetland polygons used in the study. The overall accuracy of the study was an
impressive 96%, with 90% accuracy for changed wetlands and 8% of the wetlands
showing a conversion to other land uses. The reasoning behind the study was that the
National Wetland Inventory (NWI) coverages were two decades old and needed to be
updated. Limitations of the study include the fact that since only previously surveyed
wetlands were monitored for change, the accuracies were artificially high compared to
was limited to the 20-meter resolution of the SPOT data, and no allowance was made for
created or mitigated wetlands that could have been created within the past twenty years.
Other work has been done using multi-sensor assessment (Toyra et al., 2001) and neural
Hyperspectral classification of wetlands is relatively new and the literature not yet
fully developed. Recently, only a few researchers have reported the use of hyperspectral
images for wetland mapping. Relevant studies include Anderson, Garono, and Robinson
(2003), Bakker and Schmidt (2002), Carter, Wells, and Lewis (2004), Juan, Jordan, and
Tan (2000), and Schmidt and Skidmore (2002). This dearth of studies exists perhaps
because hyperspectral imagery requires more complex software and more powerful
computers for processing than multispectral imagery. It is also more expensive, but
according to the following research, has yielded more accurate results than traditional
multi spectral imagery classification. The following sections provide a brief background
Studies using pixel classifiers, such as SAM, Minimum Noise Fraction, and
Aspinall, Boardman, and Crabtree (2003), Salem and Kafatos (2001), and Underwood,
classifier that uses an n-dimensional angle to match pixels to reference spectra (ENVI,
across landscapes (e.g., different aspects) do not create false differences between pixels
of the same composition (ERDAS, 2002). For a detailed description of the SAM
Carter, Wells, and Lewis (2004) evaluated the potential ofITD VNIR IOE (a type
Mobile Bay, Alabama, in September of 2003. Ground resolution was one meter, and the
wavelengths captured were in the 400 to 1000 nm range. They were successful in
detecting Chinese tallow tree (Tridica sebifera), and water hyacinth (Eichhornia
Schmidt and Skidmore (2003) studied 27 salt marsh vegetation types in a coastal
Dutch wetland and concluded that statistical variation of wetland vegetation reflectance
spectra is possible in the visible to short-wave range. They used a three step analysis to
technique in the visible range (although it failed in the infrared range), and measured the
distance of the vegetation types in spectral space using the Bhattacharyya and Jeffries-
Matusita distance measures. S-Plus software was used to process the 579 bands between
400 and 2500 nm with a gap between 1820 to 1940 nm for atmospheric water absorption.
A GER spectrometer was used to measure the in situ reflectance on 132 vegetation plots.
The bands found to be the most useful for discriminating wetland vegetation types were
15
between 740-1820 nm in the shortwave infrared and between 400 to 700 nm in the visible
spectrum. Six wavelength bands were then selected out of the above mentioned bands
based on their higher frequency of statistically different median reflectance and their
more-or-less spacing across the whole spectrum. Those bands are: 404, 628, 771, 1398,
1803, and 2183 nm. This study provides a foundation for other researchers wishing to
test those specific bands for their own wetland study areas.
Bakker and Schmidt (2003) concentrate on edge filtering for hyperspectral images
in agriculture and salt marsh test areas. They conclude that hyperspectral edge filters can
assist in image interpretations. Lastly, Juan et al. (2000) flew a hyperspectral mission
over Fort Drum Marsh in Florida using an unspecified hyperspectral sensor that collected
64 wavebands in the 399.2 to 920.5 nm range. They were successful in delineating the
wetland species from the airborne hyperspectral imagery, but did not release what
Imager (CASI) Imagery along with Landsat 7 ETM+ images to map wetlands along the
Columbia River. They originally wanted to map the entire area with CASI, but ran into
time and budget issues. Their configuration for the CASI imagery was 19 bands from
459.3 nm to 819.8 nm, and 1.5 meter spatial resolution. They masked out the urban areas
and used National Wetland Inventory maps along with ground truthing to create the
classification. They were able to determine over 80 different classes with the CASI
imagery, 20 of which were purely spectrally determined. They also used ERDAS
Imagine software and the ISODATA unsupervised classification algorithm, where 6-7
16
major habitat types were identified and then continuously cut from the originally 19-band
mosaic until all spectral classes fit their criteria of narrowness. Their accuracy
successfully in a southern California coastal habitat using the Minimum Noise Fraction
algorithm and band-ratio indices. Salem and Kafatos (2001) used the SAM algorithm
along with hyperspectral imagery to detect oil spills in Chesapeake Bay, and concluded
multispectral and aerial photographs). Marcus et al. (2003) evaluated one meter, 128
band hyperspectral imagery for mapping in-stream habitats, depths, and woody debris in
Yellowstone National Park. They concluded that clear water was necessary to measure
depth, and that tree canopy cover was also a problem. They accomplished high overall
accuracies ranging from 69 to 99%. One method (classifier) not seen in the hyperspectral
and wetlands literature is the object-oriented one, discussed in the next section.
(IKON OS, QuickBird, etc.) for land-cover classification. Of particular interest to many
researchers is urban area classification due to the functions associated with eCognition
software. However, other research has focused on natural resource and wetland
classification, as shown by many studies (Antunes, Lingnau, & Da Silva, 2003; Civco,
17
Hurd, Wilson, Song, & Zhang, 2002; Gomes & Marcal, 2003; Ivits & Koch, 2002; Kaya,
Pultz, Mbogo, Beier, & Mushinzimana, 2002; van der Sande, de Jong, & de Roo, 2004).
van der Sande et al. (2004) divided one meter, four-band IKONOS-2 imagery into
different land cover segments with an overall accuracy of 74%, and then used that
thematic map as an input for a flood-simulation model. They were able to then
successfully estimate flood damage for local land-use planners and insurance companies.
Gomes and Marcal (2003) used 9-band 15-meter Advanced Spaceborne Thermal
Emission and Reflection Radiometer (ASTER) imagery to revise a 1995 land-cover data
set for the Vale do Sousa region in northwest Portugal. Their overall accuracy was
71.5%; forested areas, which were emphasized in the study, had an average accuracy of
46.3%.
areas that could not be spectrally differentiated in the northern part of the state of Parana
in southern Brazil. They needed to map declining wetland areas for resource
for riparian vegetation and 78.6% for swamp vegetation. They also ran a Bayesian
Maximum Likelihood classifier for the same areas and came up with 56.0% for riparian
areas and 45.3% for swamp vegetation. Although they showed promising results, there
was a disappointing lack of detail in their exact pre-processing and methodology steps.
(among others) for land cover change detection in the Stony Brook Millstone River
watershed in New Jersey using Landsat ETM+ data. They concluded that no single
18
method was superior for their study data and area. However, they admitted "The image
segmentation and object-oriented classification holds much promise." and "The image
produced better overall results, especially in terms not only detecting and characterizing
the nature of change, but also in minimizing the salt-and-pepper effect caused by isolated
and non-contiguous pixels" (p. 8). Ivits and Koch (2002) used six European test sites and
IRS panchromatic and Landsat ETM imagery along with object-oriented classification to
Kaya et al. (2002) acquired RADARSAT-1 data to map wetlands and other land
cover types in coastal Kenya to assess malarial risk. Their object-oriented approach
resulted in 85.5% overall accuracy and 65.3% accuracy for wetlands. They tested
cloud free images for coastal, tropical regions. Some problems they encountered with the
data included backscattering returns being classified as wetlands, as well as certain forest
types (mangrove) also being wrongly classified as wetlands. Harken and Sugumaran
in Eddyville, Iowa.
As Hey and Philippi (1999) note, wetlands can be restored to provide functions
that have been lost. They also note that wetland restorations are most effective when they
currently occupy less than 10% of the area to be restored. There are no standard models
19
for restoring wetlands as there are for determining and mapping wetlands (which in itself
created and implemented. Berman, Rudnicky, Berquist, and Hershner (2002) worked in
Virginia and the Lower Mississippi River Conservation Committee (2001) completed a
study in the Mississippi Alluvial Valley in Missouri. Sader et al. (1995) worked in
Maine, Braster and Radish (1996) in western Iowa, and Riverlink (2000) in North
Carolina.
Other useful studies include wetland hydrological modeling (Brown, Johnston, &
Cahow, 2003; Loiselle, Bracchini, Bonechi, & Rossi, 2001; Tsihrintzis, John, &
Tremblay, 1998; Whittecar & Daniels, 1999) as well as wetland nutrient modeling (Wang
& Mitsch, 2000), wetland soil carbon modeling (Trettin, Song, Jurgensen, & Li, 2001),
wetland habitat modeling (Wakeley, 1988) and wetland buffer modeling (Budlong,
2002). The end product of the Lower Mississippi River Conservation Committee (2001)
model is a raster map, where each 30-meter cell has a arbitrary weighted value of 7 to 75,
deliver water quality benefits ifrestored. The model's purpose was to prioritize areas for
forested wetland areas on private land next to the Mississippi River in south-east
Missouri. They used ARC/INFO and Arc View Grid Analyst software, as well as State
73.33% of the total model weight, and reforestation (soils) 26.67%. The reasoning
one for a general need assessment that identified 94 watersheds, a second to identify
high-probability wetland restoration areas that identified 140,000 acres of land, and a
third to identify large parcels of land, 25 acres or more, that identified 4 77 potential sites,
and 78 high potential sites. Hydrologic units were determined to have too coarse a
resolution for the study needs so small management units were created in Arc View based
on a flow accumulation of 5,000 grid cells or approximately 1,148 acres. Grid cells in
each layer of the model (wetlands, building starts, agriculture, roads, elevation, sewer,
and conservation/natural resource areas) were ranked on their presence or absence, their
linear distance from each other, and what percent of the grid cell they covered. The cells
were then scored and regrouped into three natural break categories of restoration
potential, high need, medium need, and low need. They also used another natural break
(Jenks) regrouping based on final parcel size; i.e., their need was to develop wetland
Budlong (2002) used three factors in determining potential riparian habitat buffers
of row crops to streams and rivers, slope, and proximity of feedlots to rivers and streams
of the watershed. It should be noted that in most of the restoration models reviewed,
proximity to a hydrological feature (usually a river or stream) and slope were always used
as model factors. Hydric soils were also found to be important in ranking potential
21
wetland restoration areas, and these areas were always preferred to be agricultural.
low restoration potential. To achieve this goal of ranking, percentages were used for
land-cover types within the 50-meter stream buffer (>65% row crop area meant high
potential, etc.), mean slope value within 300 meters of all hydrological features, and total
areas of feedlots within the 50-meter stream buffers. The final equation was: (x = row
* 0.65) + (y * 0.25) + (z * 0.10). One of the most important conclusions from this study
was that riparian stream buffers should be adjacent to the headwater streams of a
Berman et al. (2002) used ARC/INFO software, a land-cover layer derived from
30-meter Landsat United States Geological Survey (USGS) imagery, a digital Soil
Inventory (NWI) layer, and conservation-area layers. They based their analysis on
wetland functions. Polygons were ranked as good, high, or excellent according to water
quality, flood control, sediment control, erosion control, and wildlife habitat. Landscape
position and surrounding land-cover was also used to assign rankings. Agricultural areas
Lastly, Braster and Radish (1996) wanted to identify current land uses and offer
alternatives to land managers of floodplain areas. They wanted to do this by using GIS,
informed development strategies. Chi-square values were developed for the variables of
22
depth of water table, number ofNWI wetlands, presence ofNWI wetlands, position of
soil mapping units, com-suitability ratings, presence of hydric and non-hydric soils, and
proximity to levees. Lo git modeling was used and weights and ratings for the variables
were based on the chi-square for the first model (Model 1) and field experience for the
second model (Model 2). The formula for the composite score was= (W 1 * R + (W *
1
)
2
R 2) + ... + (WA7 * R"7) where W 1 is the weight for the variable mapped data layer 1 and
R I was the rating assigned to the category on data layer 1. Weightings were based on a
GIS map arithmetic approach, after Anderson (1992). After applying the models to the
312 selected study sites frequency statistics were generated. Both models showed a high
All of these studies in both wetland classification and restoration methods have
been important in the fields of wetland delineation and restoration research. Their
limitations include not bringing together updated wetland classification and restoration
models and unacceptable accuracies. This study will attempt to address some of those
issues through the use of a new classifier (object-oriented), up-to-date data sets, and a
unique site context (the Iowan Surface and Southern Iowa Drift Plain landforms, more
specifically Black Hawk County and Eddyville) in which to apply the methods and
potential wetland area restoration model. Also, in the literature the majority of
hyperspectral mapping of wetlands has been concentrated in coastal and estuarine areas,
CHAPTER3
METHODS
Study Area
Two study areas were used in this research: Black Hawk County, located in the
northeastern part of the state and encompassing 567 square miles, and 50 acres near
Eddyville, in south-east Iowa. The imagery used included 30-m Landsat ETM+ for
Black Hawk County and 60 cm CASI for Eddyville, discussed further in the next section.
The two study areas were chosen for the following reasons: (a) Black Hawk County
because imagery was available at no cost, and local experts could critique the
methodology along the way; and (b) Eddyville because it is the only portion of the state
Data Used
Black Hawk County, Iowa is the fourth most populous county in the state and is
located at 42.491N Latitude and 92.367W Longitude. The multispectral imagery used for
mosaic (Figure 3, left), obtained from the Iowa Geographic Image Server, a September
2000, 30-m Landsat ETM+, and a July 1999, 30-m Landsat ETM+ obtained from the
University of Northern Iowa's STORM Project (Figure 3, right). Two hybrid data sets
were created by pan-sharpening the Landsat images with their 15-m panchromatic band,
Principal Components Analysis and a Matrix of the two seasonal Landsat images. The
choice of the data sets was based on their no cost availability and their temporal
24
applicability (all three within the last four years). This is pertinent because one of the
project goals was to create an updated wetlands map for the county using the most up-to-
date imagery available. As stated previously, the current wetlands map, created by the
Iowa Department of Natural Resources (IDNR) and the NWI, is based on aerial
photograph interpretation and field surveys done almost twenty years ago. The vector
ancillary data used for cross checking the multispectral imagery, classification accuracy
assessments, and as direct inputs into the restoration model (wetland areas, hydrology,
soils, and conservation areas) were obtained from various sources, including the USGS,
NRCS, IDNR, NWI, and Iowa Geographic Map Server. Additionally, data were acquired
from the Black Hawk County GIS office. The software used with the multispectral
imagery was ERDAS Imagine 8.6, eCognition 3.0, and ArcGIS 8.2.
Figure 3. Black Hawk County, Iowa. One meter CIR image (left)
and 15 m Landsat ETM image (right).
25
Eddyville, Iowa is a small town located in the south-central part of the state along
the Des Moines River at 41.160N Latitude and 92.631W Longitude. The hyperspectral
image used for classification was flown with the CASI sensor in July of 200 I for a Iowa
[NCRST-E], 2002). The 2001 image is a mosaic of seven flight lines and has a spatial
0.018 micrometers with a range of 350 to approximately 2500 nanometers (Figure 2). In
addition, a I-meter Color Infrared Image from the IDNR, SSURGO maps and NWI data
were used for training and accuracy assessment. The software used to process and
classify the hyperspectral image was ENVI 3.6 and eCognition 3.0.
discovered this when they planned a highway bypass northeast of the city and citizens
informed the IDOT of the protected species and habitats (NCRST-E, 2002). However,
only a SO-acre test portion of the study area was classified in this research (See Figure 4).
Wetland vascular plant species in the area include such species as: Festuca rubra L. (red
aparine (Goose-grass), Utica dioica (nettles), and Marus alba (White mulberry). All of
26
the before mentioned species occur on the 1996 National List of Vascular Plant Species
that Occur in Wetlands, published by the U.S. Fish and Wildlife Service (United States
the processing behind the multispectral and hyperspectral images. Figures 5 and 6
demonstrate the overall flow of the multispectral and hyperspectral image analysis
process.
Multispectral Data
Data Fusion
Accuracy Assessment
CASI Data
Band Selection
00 Classification
Accuracy Assessment
Object-Oriented Classification
object-oriented analysis are image objects or segments, and not single pixels (Baatz &
Schape, 2001 ). The reasoning behind this is the expected result of many image-analysis
based on the networking of these image objects, which must be explicitly worked out in
between objects and their sub-objects and super-objects. Single pixel objects represent
the smallest possible processing scale. Other information used in object-oriented analysis
includes tone, shape, texture, context, and information from other object layers.
almost infinite number of solutions. They can be roughly grouped into two categories:
User Guide (Baatz & Schape, 2001), image segmentation in the eCognition software is
heterogeneity of image objects for a given resolution over the whole scene. The
parameters that must be set for image segmentation in eCognition include: (a) aliases, (b)
layer weights, (c) image-object level, (d) scale parameter, (e) segmentation mode, (f)
express an object's assignment to a class. Please refer to Figure 7 for a graphical example
of a fuzzy function. The membership value lies between 1.0 and 0.0, where 1.0 expresses
In eCognition, the software used for this project, supervised classification was
used to create training areas to classify the data, and ultimately, to see how well wetlands
were classified.
µ = 0.5
µ = 0.0
Figure 7. Example of a Fuzzy Function. A crisp set M (rectangle) and the fuzzy sets
A and C (triangles) over a feature range X.
The unsupervised classification of the CIR I-meter (4.6 GB file size) was
completed using ERDAS Imagine's ISODATA algorithm with the following parameters:
120 classes with a convergence threshold of .95 and 30 maximum iterations. To identify
separable clusters in the histogram, 120 classes were selected. Classes were then
identified by visual interpretation based on the original false-color image and recoded
(merged) into 6 general classes based on the Anderson, Hardy, Roach, and Witmer
Wetlands), Mixed Forest, Artificial Surface, Fallow/Bare Soil, Mixed Grasses (includes
Mixed and Herbaceous Grasses), and Open Water. The supervised classification of the
created signature file of polygon AO I's by visual interpretation and NWI ancillary data
and grouped into the same six general classes used in the unsupervised classification:
Wetland, Mixed Forest, Artificial Surface, Fallow/Bare Soil, Mixed Grasses, and Open
Water. The accuracy assessment for the CIR was performed by generating 300 random
stratified points or 50 points per class. The points were then visually interpreted on an
For the object-oriented classification of the 1-m CIR image, a 2,881-acre subset
was classified, due to file size restraints within the software. This specific limitation is
discussed in greater detail in Chapters 4 and 5. Layer 3 of the CIR image was given a
slightly higher weighting (1.0 versus 0.8 for layers 1 and 2) based on its proven
vegetation sensitivity characteristics (Lillesand & Kiefer, 2000). For the accuracy
assessment of the subset image, GPS ground trothing was performed for 35 areas during
June of 2003.
The unsupervised classification of the Landsat ETM+ 15-m image of Black Hawk
County was done using the same parameters as the other unsupervised classification
(CIR) to insure statistically comparable results. The ISODATA algorithm was used to
separate the image into 120 classes with a convergence of 0.95 and 20 maximum
ancillary data and then grouped into six classes. A Row Crop class was substituted for
Fallow/Bare Soil for this classification because the image was captured in September and
much more planted vegetation was present than in the April CIR. The other five classes
32
remained the same. The supervised classification of the Landsat image was completed
polygon AO I's based on visual interpretation and NWI ancillary data and grouped into
the same six classes as the unsupervised Landsat classifications. The accuracy assessment
was performed by generating 240-300 random stratified points or 40-50 points per class
Image as well as layer 3 (SWIR) on the CIR were given slightly higher weightings (1.0
compared to 0.8) during the initial segmentation based on their proven vegetation
average of 185 objects per class and 50 samples per class were tested (6 classes) for a
total of 300 random sample points for the accuracy assessment (except for the Landsat
ETM 30-m where lack of objects kept the points down to 20 per class). Objects generally
ranged from 5-15 pixels in size for the CIR and 94-95 pixels for the Landsat image.
Imagine's interpreter function under GIS analysis to address the third research question
and followed the same classification and accuracy assessment procedures as mentioned
above. Figure 5 shows the overall multispectral processing flow for both the CIR and
The Spectral Angle Mapping Wizard was run in ENVI against the subset
the most pertinent steps are shown in the flowchart in Figure 6. The first step in the
image analyses was to select suitable bands and to reduce noise. A Minimum Noise
Fraction (MNF) algorithm was run to determine the inherent dimensionality of image
data, segregate noise, and to reduce the computational requirements for subsequent
processing (Boardman & Kruse, 1994). The MNF is a linear transformation that consists
of two separate principle component analysis (PCA) rotations, separating noise from
signal and compressing spectral information to a few bands (Green, Berman, Switzer, &
Craig, 1988). Based on the MNF output graph of eigenvectors and by visually inspecting
the new bands, 16 of the 25 bands were selected as inputs for the classification. The next
step in the flow chart is the identification of training areas or RO I's (Regions oflnterest),
or supplying spectral endmembers as stated in the SAM wizard. Regions of Interest were
selected from ground control points and augmented with visual interpretation. For the
entire 969 acre image, 82 ground truth points were available, 41 of which were used to
develop training areas and 41 of which were used to develop ROI's for accuracy
assessment purposes. Training and accuracy areas were also grown from seed pixels and
Infrared Image along with corresponding digital SSURGO soil maps and National
Wetlands Inventory data. The Spectral Angle Classifier was then run using a maximum
angle of O.10. Output rule images were also generated to see if any of the classes were
34
poorly identified. A comparison between the classified image and validation areas was
(see Table 14). For more information on post-classification techniques using ENVI and
Nine classes were chosen to represent all wetland types present as well as
additional aggregated land cover types. Wetland types were based on ground truth
assessments and other land cover types were based on the Anderson Level classification
(Anderson et al., 1976). The classes include three classes of wetland: Open Water,
Aquatic Vegetation, and Flooded Forest, and the other land cover classes include:
Floodplain Crop, Upland Crop, Artificial Surface, Herbaceous Cover, Shadow, and
Mixed Forest. These are shown in the final output maps (Figure 10).
For the object-oriented classifier, the same procedures were followed for steps
one through four of the flowchart shown in Figure 5. The same 16 bands used for the
SAM classifier were exported to an ERDAS Imagine format (.img), and then subset into
a smaller file size (because of eCognition's file size limitation), and lastly imported into
eCognition. The hyperspectral image was segmented using the following parameters:
classification see Benz (2001), Baatz and Schape (1999), and Darwish, Leukert, and
Reinhardt (2003).
35
A standard accuracy assessment was also run in eCognition, using ground truth
points and visually interpreted areas, resulting in a confusion matrix output analogous to
ENVI's: overall accuracy, wetland users accuracy, wetland producers accuracy, and the
kappa statistic.
A restoration model for Black Hawk County was developed to identify areas that
cannot be defined as current legal wetlands, but due to their nature of soil properties,
distance to surface hydrological features, and elevation, were most likely wetlands in the
past. It was also created to reveal what areas that would provide the most benefit for the
least cost and time when planning conservation within the county.
The model shown in Figure 8 is based on Berman et al. (2002), Braster and
Hadish (1996), Budlong (2002), Cowardin et al. (1979), Lower Mississippi River
Conservation Committee (2001), Riverlink (2000), Sader et al. (1995), and the US Army
These authors found hydric soil, low slope, and distance to hydrological features and
existing wetlands as the most important variables. Those variables were weighted in this
model accordingly except for low slope, as the entire county study area is flat enough to
disregard that as a factor. Other variables included in the literature but not deemed
applicable to the study area of Black Hawk County were defining hydrological basins,
distance to levees, and amount of forest cover. Since this study is focused on wetland
restoration sites and not current delineation and mapping of wetlands, criteria one of the
36
federal wetland definition (hydrophytic vegetation) was not used. Significant land cover
changes (mostly conversion to agriculture) in the study area during the last 150 years
Four data layers were incorporated into the model shown in Figure 8: (a) a
SSURGO soil type layer from the NRCS, (b) a hydrology layer (rivers and streams) from
the IDNR, (c) an existing wetlands layer from the NWI, and (d) a shapefile of Black
Hawk County Conservation Areas obtained from the Black Hawk County GIS office. All
shapefiles were converted into coverages in ArcGIS 8.2 to build topology and converted
to the same projection, Universal Transverse Mercator Zone 15 North, North American
Datum 27. The four coverages were then converted into raster (grid) format in ArcGIS
Spatial Analyst to facilitate weighting and ensure uniform cell size between layers. A 30-
meter cell size was chosen as this was the lowest resolution of confidence according to
the accuracy assessments included in the layers' metadata. Also, a 1992 30-meter USGS
Landcover map was used to initially mask out areas unsuitable for restoration (urban,
bare rock and sand, open water, existing wetlands) and a 1996 county roads map from the
IDNR was used to mask out a 30-m buffer along roadsides (see Berman et al., 2002).
37
Existing
Wetlands
important for the study area of Black Hawk County. The Existing Areas Index was
evaluated to be the most important, with areas adjacent or contained in an existing county
conservation area ranked as a one (on a scale of one through four, one being the highest),
and the adjacent to existing wetlands factor ranked as a three. The reasoning behind this
is that wetlands have a greater chance of being restored and are easier to manage if they
are to be located in land already owned or adjacent to county conservation land (S.
Finegan, personal communication, May, 2003). The Soils Index was ranked as the next
in importance, because to meet the federal definition of a wetland, the wetland must
contain hydric soil (Cowardin et al., 1979). Therefore poorly-drained, hydric soil was
given a ranking of two. Lastly, proximity next to a surface hydrological feature was
ranked at four, because of the importance given this variable in previous studies
38
(Budlong, 2002). All cells in each layer were reclassified using Spatial Analyst's
Reclassify function by adding a column in the attribute table (RANK) and providing a
score. The final equation, adapted from Budlong (2002), was: (x = existing area index
total, y = soil index total, z = hydrology index total) RESTORATION POTENTIAL= [(x
CHAPTER4
Multispectral classification results for Black Hawk County include three classifiers for
the CIR imagery, and three classifiers for the Landsat ETM imagery. Hyperspectral
classification results for Eddyville include two classifiers for the CASI imagery.
Multispectral Hyperspectral
ISODATA
Figure 9 depicts the CIR image classification with three classifiers: ISODATA,
represent wetlands, black, water, and gray tones other land-cover classes. For full-color
Figure 10. Results from Multispectral One Meter CIR Image Classification.
The object-oriented method gave the highest overall accuracy when classifying
the CIR (73.2%) while the Maximum-Likelihood classifier gave the highest wetland
producers accuracy (75.0%) while the object-oriented classifier gave the best wetland
users accuracy (50%; see Table 13). The object-oriented classifier in general performed
worse than expected, and in contrast to previous studies in which high-resolution imagery
(four meter IKONOS) had been used to identify wetlands (Antunes et al., 2003). Two
possible reasons include incorrect scale parameters used in the segmentation step and
performed better the more layers present there were to segment (see Table 6, 12, and 17).
However, the one-meter CIR was very useful as an ancillary data source and wetlands
to agencies seeking to define wetlands from remotely-sensed imagery. Also, the entire
county was not classified with the object-oriented classifier and the CIR image, because
of file limitations in the eCognition software, a problem that also surfaced with the
canopies and wetland areas better than the Maximum-Likelihood supervised method; it
was also slightly more accurate overall. Strangely, the supervised method identified the
Table 1 provides the error matrix for the CIR Maximum-Likelihood supervised
classification, and Table 2 shows the various accuracy percentages for different types of
land-cover classes. Similarly, Table 3 displays the error (or confusion) matrix for the
CIR unsupervised ISODATA algorithm classification, and Table 4 lists the class
accuracy percentages for the before mentioned method. Lastly, Table 5 represents the
confusion matrix for the object-oriented classification method, again using the 2002
Color Infrared one meter aerial photo. Table 6 illustrates the class accuracy percentages
for the CIR object-oriented method. One random point for the CIR supervised
classification accuracy assessment had to be discarded since it fell out ofrange of the
accuracy assessment.
42
Table 1
Table 2
Table 3
Table 4
Table 5
Error Matrix CIR Object Oriented Classification (GPS ground truth points)
Table 6
& ML) when classifying the September 2000 Landsat imagery. Overall accuracy was
higher in both the 30 m (73.9%) and 15 m (90.7%) images (Table 13). However, wetland
identification accuracy was only better than the pixel-based methods when spatial
Segmentation parameters were taken from previous studies (Antunes et al., 2003; Fisher,
Gustafson, & Redmond, 2002; Gomes & Marcal, 2003; Meinel, Neubert, & Reder, 2001;
Schiewe, 2001) who also used multispectral satellite imagery and reported generally
similar accuracies for different land cover types using the object-oriented classifier. In
Figure 11, the results of the Landsat ETM image classification are shown side by side for
comparison. For full color maps of the classifications refer to Appendix: Maps.
Figure 11. Results from Multispectral 15 Meter Landsat ETM Image Classification.
45
In Figure 11, light areas represent wetlands, black, water, and gray tones other
land cover types. Table 7 illustrates the confusion matrix for the pan-sharpened Landsat
percentages for the before mentioned method according to class. Similarly, Table 9
represents the error matrix for the ISO DATA unsupervised classification of the Landsat
image in ERDAS Imagine and Table 10 explains the class producer and users accuracy
for the ISODATA method. Lastly, Table 10 shows the object-oriented classification
error matrix for the classified Landsat ETM+ and Table 11 the object-oriented class
Table 7
Table 8
Table 9
Table 10
Table 11
Table 12
For the Landsat imagery, the ISODATA classifier performed as well as the
object-oriented one for classifying land-cover types other than Wetland and Mixed Forest
types. Overall accuracy for the unsupervised classifier was superior to the supervised
classifier in both the Landsat and CIR imagery, suggesting that a "cluster-busting"
Likelihood classification. Also, the above results (Tables 7 through 12) and the overall
Landsat results (in Table 17) are based on classification of a partial September 2000
Landsat ETM+ image. A full scene for Black Hawk County was available for July of
48
1999, and was used for the seasonal matrix and used for the final Black Hawk County
wetlands map (see Appendix A: Map 7), but not for classifier comparison due to the
large amount of flooding present on the Landsat ETM+ July 1999 image.
Figure 11 and Tables 13 through 16 show the classified outputs and accuracy
assessment for the object-oriented and SAM classifiers for the CASI image. Average
wetland producers accuracy for the Spectral Angle Mapper classifier was 79.3%,
somewhat higher than in other comparable studies, such as Garono, Schooler, and
Robinson (2003). They achieved 74% accuracy with the ERDAS ISODATA
unsupervised algorithm to map tidal wetlands along the lower Columbia River with CASI
imagery. The greatest confusion between wetland classes for the SAM classifier was
between the flooded forest and mixed (upland forest) categories, and also with the
emergent (herbaceous) land cover class. This has also been found in many other studies,
due to the inability of the wavelengths to penetrate the vegetation canopies. Possible
solutions to this problem include RADAR (Bourgeau-Chavez et al., 2001) and LIDAR
emergent herbaceous vegetative cover and wetland classes is also fairly well documented
(Ozemi, 2000). A workable solution to this problem is the extraction of individual plant
species from the hyperspectral imagery, which was not completed in this study due to
time constraints.
2003). The results of this classification appear to be valid also for hyperspectral imagery.
Wetland users accuracy for the object-oriented classifier (86.7%) was lower than
producers accuracy, mirroring the SAM classifier. Confusion between classes was
mainly limited to forested wetland and forested upland, which was also a problem with
the SAM classifier. The accuracy assessment is based on the 50-acre study area. The
comparison between these two classifiers revealed some interesting results. The object-
oriented classifier produced better overall accuracy (92.3% vs. 68.2%) and better wetland
class accuracy (97.6% vs. 79.3%) than the SAM classifier. Wetland Users Accuracy was
lower than Producers Accuracy in both classifiers, suggesting that these two methods are
more suited to detecting wetlands than for managing them from a users standpoint.
The last wetlands survey completed for Mahaska, Wapello, and Monroe counties
was conducted by the Iowa Department of Natural Resources in 1996 and is based upon
National High Altitude Program Color Infrared Photographs taken in 1983 and 1984.
The total wetland acreage for the entire hyperspectral image area according to that
information is 53 acres. For the 50-acre study area that was classified in this research,
2.6 acres of wetlands were identified from the last wetlands survey. Comparison of the
1996 wetlands survey against the 2002 1-m CIR aerial photo clearly shows that many
wetland areas have been developed or farmed or have shifted, necessitating an updated
survey. The SAM classifier for the 50-acre study area identified 4.1 wetland acres, 0.2 of
which were Open Water, 0.6 acres of Aquatic Vegetation, and approximately 3.3 acres of
Flooded Forest. The object-oriented classifier for this study identified 3.9 acres, 0.3 of
50
which were Open Water, 0.6 acres of Aquatic Vegetation, and approximately 3 acres of
Flooded Forest.
There are also issues with these two classifiers for wetland classification. Known
sources of bias include the fact that pixel-based classifiers such as SAM in hyperspectral
imagery tend to perform best when extracting individual spectra of individual plant
species (ERDAS, 2002; ENVI, 2002) and this study grouped different species of wetland
vegetation into generic land-cover classes, a fact that might have favored the object-
oriented classifier, which inherently classifies such object-based primitives. Other studies
have shown higher accuracies using hyperspectral imagery and pixel-based methods
(such as MNF, ration indices, etc.) to extract individual plant species spectra (Garono et
al., 2003; Underwood, 2003). File size in eCognition is also another limitation. The
version of eCognition that was used, 3.0, was unable to segment and classify files larger
than 100 MB, which in this study represented 15-20 acres of the total 969 acre image.
Therefore, the CASI image had to be divided into 60 different tiles. Definiens Imaging,
the parent of eCognition software, has told the researchers that this file size limitation
will be corrected in the release of eCognition 4.0. In Figure 12, the results of the
Figure 12. Results from CASI Hyperspectral Image Classification. The left-hand image
was classified using the eCognition Object-Oriented Classifier and the right-hand image,
the ENVI Spectral Angle Mapper classifier. In the left-hand (object-oriented
classification) image, the dark tones represent open water, saturated soil, and upland
(non-wetland) forest. The lighter areas are aquatic vegetation and herbaceous cover. The
gray-tone classes represent dry bare soil and flooded (wetland) forest. On the right-hand
side image (Spectral Angle Mapper classification), dark tones represent open water,
saturated soil, and aquatic vegetation. Lighter areas represent upland and flooded forests,
and gray-tones herbaceous cover and dry bare soil.
52
Table 13
Table 14
Table 15
Table 16
17. Accuracy comparisons between the classifiers were completed using the same areas;
for example, county-wide stratified random points for the CIR and Landsat images, and
the same 50-acre subset for the hyperspectral Eddyville image. Accuracies increased
54
(both for the wetland class and the overall average) when spatial resolution of the Landsat
imagery was sharpened with the panchromatic band; also, the unsupervised ISO DATA
algorithm performed better for overall accuracy than the supervised Maximum-
Likelihood classifier. This is consistent with the results of other studies (Ozemi, 2000).
The object-oriented classifier increased overall accuracy with the Landsat imagery over
the traditional pixel-based classifiers, but did not increase wetland-identification accuracy
until the spatial resolution was increased (see Table 13). The CIR imagery in general
performed poorly with all automated classifiers, suggesting that even though the spatial
resolution was very sharp, either more bands such as Landsat 4 & 5, (see Chen 2002), are
needed to detect vegetation, or seasonality played a role because the imagery was flown
in late April/early May of 2002 before the growing period of many wetland vascular
plants in the northeastern part of the state. The most accurate results came from the
approach.
accuracies than anticipated, especially for identifying wetland areas. It did, however,
increase accuracies for row-crop cover and herbaceous cover. This may be due to the
large amount of flooding present in the July 1999 Landsat image. Landsat imagery
remains a valid choice for large-scale wetlands mapping projects, especially with the
Table 17
HYPER- HYPER-
CIR CIR LSAT LSAT LSAT LSAT SPECTRAL SPECTRAL
CIR lm lm 15 m 15 m 15 m 15 m LSAT CASI 60 CASI 60
lm ISO- Max- ISO- Max- Pan Seasonal 30m cm cm
0-0 DATA Like DATA Like 0-0 Matrix 0-0 0-0 S.A.M.
Overall
Accuracy 73.2 59.7 57.9 79.17 64.0 90.7 67.3 73.9 91.7 68.2
Wetland
Producers 68.8 55.0 75.0 57.14 70.0 73.7 77.78 58.8 94.6 79.3
Accuracy
Wetland
Users 50.0 22.0 36.0 40.0 63.6 66.7 46.67 50.0 86.7 71.5
Accuracy
Kaeea 0.701 0.52 0.49 0.75 0.552 0.888 0.622 0.667 0.904 0.637
Note. 0-0: Object-Oriented Classifier, ISODATA: Unsupervised Classification, 120 Initial Classes
The results of the wetland restoration model are as follows. Black Hawk County,
Iowa encompasses an area of 567 square miles, or 362,880 acres. From that initial
acreage, 56,729 acres were masked out as unsuitable based on the USGS Landcover
raster layer of the following classes: (a) Low Intensity Residential, (b) High Intensity
Quarries/Strip Mines/Gravel Pits, (f) Urban/Recreation Grasses, (g) Open Water, (h)
Woody Wetlands, and (i) Emergent Herbaceous Wetlands. The accuracy assessment for
that 1992 data set was made publicly available on March 17, 2004 (United States
56
Geological Survey, 2004). The overall accuracy for Black Hawk County was only 53%,
but for the classes masked out the accuracy was 60.4%. Urban areas were chosen as
unsuitable restoration areas as well as bare areas and existing wetlands. Landcover
classes left as suitable for restoration included: (a) Deciduous Forest, (b) Mixed Forest,
(c) Grasslands/Herbaceous, (d) Pasture/Hay, (e) Row Crops, and (f) Small Grains.
From the remaining 306,151 acres, 93 .4 acres in 10 parcels were also masked out
as they are recognized as wetland parcels by the county assessor's office. Non-urban
county roads along with a 30-meter buffer totaling 24,724 acres were also masked out to
Berman et al., 2002). That left 281,334 acres or 440 square miles for wetland restoration
consideration. Based on the flow chart in Figure 8 on page 36, cells classified as having
soil that was hydric with poor drainage were given a score of 4 in the SSURGO soil data
layer. Cells that did not meet this criterion were eliminated from consideration, as
according to the federal definition of a wetland (see page one) a wetland must contain
hydric soil, hydrophytic vegetation, or be in an area where the water table saturates a
non-soil substrate or covers the area with shallow water periodically. As hydrophytic
agriculturally based one) and water table depth information was not available, the hydric
soil criterion was chosen as the ranking factor or Step 2 in the flowchart. Eliminating
cells that were not hydric resulted in narrowing the suitability area down to 121,271
acres. The next step was determining if the potential wetland restoration area was within
a buffer of 20 meters for a hydrological feature (stream) or 50 meters of the Cedar River,
57
as wetland areas are proven floodwater storage areas (Sierra Club, 2000) and wetlands
erosion (Budlong, 2002). These cells were given a score of 1, and totaled 17,491 acres.
Step 4 included identifying cells that were adjacent to existing wetlands. For the wetland
areas, a 1996 Iowa Department of Natural Resources wetlands layer was used (based on
1983/84 aerial photos) instead of the updated Black Hawk County wetlands map
produced earlier in the research as the wetland producer and user accuracies were lower
(73.7 and 66.7% respectively) in the updated wetlands map. However, the model was run
using the updated wetlands map and produced results less than one standard deviation
from the mean as compared with using the older wetlands data, indicating no dramatic
shifts in wetland areas or total acreage, a fact also shown by the Black Hawk County
Wetlands timeline in Figure 13 on page 57. Cells that were adjacent to existing wetlands
Lastly, cells that were adjacent to or contained within county conservation areas
were given a score of 3. The reasoning behind this is that wetlands have a greater chance
of being restored and are easier to manage if they are to be located in land already owned
2003). The final equation from the methodology section was: (x = existing area index
total, y = soil index total, z = hydrology index total) RESTORATION POTENTIAL= [(x
* 0.85) + (y * 0.65) + (z* 0.40)]. Cell scores were computed using ArcGIS Spatial
Analyst raster calculator according to the above equation (for example, if a cell had a
58
Three categories were then defined using a Jenks Natural Breaks method: Cells
with scores of 3.9 through 8.05 were ranked as most suitable areas, cells with scores of
2.7 through 3.8 were given a ranking of medium suitability, and cells with scores of 2.6
were given a ranking of low suitability. Cells with scores lower than 2.6 were deemed as
There were not too many surprises in the results of the model, as all areas were close to
surface hydrological features and generally were in areas where wetlands were present
historically. The topography of the county does not vary greatly, and some areas have
been known to county conservation officials for some time as highly-suitable areas for
wetland restoration, such as the Crane Creek watershed and areas in the southeastern part
of the county along the Cedar River. What this study contributes, through the use of GIS,
is to demonstrate where restoration of wetlands could and should take place if county or
restoration model. Figure 13 references a timeline for wetland changes in Black Hawk
County.
59
Table 18
50000
~ 40000
~
< 30000
§ 20000
~ 10000
0 +-------=
1832 1983 1992 2004
Source: IDNR Source: NW! Source: USGS Source: Harken
As shown by the above timeline, Figure 13, wetlands have decreased in the past
twenty years in Black Hawk County. This is possibly due to natural variations in the
hydrological cycle, agricultural practices, or image bias. While the acreage amount of
decrease is not great, it still shows a need for restoration planning and implementation.
As Hey and Philippi (1999) note, wetlands can be restored to provide ecological benefits
60
(wildlife habitat, non-point pollution treatment, flood water storage) that have been lost.
They also noted that wetland restorations are most effective when the wetlands occupy
less than 10% of the area to be restored, as is the case in Black Hawk County where
The Black Hawk County wetland project homepage is available to the general
goals and objectives and also methodologies and protocols developed in this project. It
also provides a summary of results, links to other wetland sites, and a comprehensive list
of references. Also available on the website is a technical report published for the Iowa
page was created so stakeholders in the project as well as the general public could access
the results and use them for their own needs. According to ESRI (2003), ArcIMS is
software specifically designed to serve geographic data on the Internet, and to develop
Web pages that communicate with maps. Potential uses of the website include: (a)
landowners identifying parcels of land that would be highly suitable to restore wetlands,
(b) corroborating evidence for local government officials for conservation planning, and
(c) general information on wetlands in Black Hawk County for the public. Users of the
website can select different layers to display, as well as use built-in functions such as a
Wetl&ndt ~ tl'lwiU~I la~d# l,et'~ttn ~ I and •quatic•y,wnt -~~ pr,:mde i:re.ny gwd1 fU\d semces,i.tlcluding f!'.ood ~l'l!tentian,
".t'•t«(j'J.aUtytMJntQW'lc:""".UdW. habJtat,and flX1 erotionCQ!lfrot. WettaA4' irl.low• t,4w dec:N>Ue4owr'$1$~inth• hm:2':IO yea:,. Th• lou ot
thr.-1111 rt:tn..i~ and bm~ftt• ,h,wr, & n«-dtomapan.d l'cWIJ:mtW'«li1.nd11:a k,w~r.,~flywht.ffeumnt. ~lti.nd ma.pt art:Ndl'lff.d,u tJthni".AH
ill Bt.dr.Haw"k ~ur.ty. Tradlttotial w«W\d ground ,arvq-, aN:tootiMI c:on,uming llild e:,;pa,.t!W: though,~d l"W'de 1e1111ng ln'lagerycan
r,cn,14tt1MII' ud m.t:~~vt tol1rticu\a., Thi.I rtudy~ tht hl~,l~~iltty0f iui~g hlg:h moluuon aJrl>offst Colet fo1ta.red (cm)1n-.gtry,rru.i1t1 ..~ I
hyt,rill dirta,an4 high moiulwti hypa-spodnil Jm11.guyla1tapand u~litt.lt ""i!!:lrw.4&1- it1 W111ra. l!\addi:lton,thll projl!d ~ treiWotta!.
cl.u1tfie!'.I! "'Jth objtct:-o.t1e11ted (OO)ctau~6atian t!!chnlque:,to lmptt)vt ~«la.nd mappit13 accuracy We1:lia.nd1 1n E:lite:tHll"f1c.County 1howcd il
11ight d«.'ft<IIIH of ,wghly l!XXI 111cn:t (+/•an U'Nt'Ull.rgin of37S acm: )from.l983-2QOO:, ht gen'"'l,the COclaa,lfi!!rptirlanred bttterthan L,ditional
pixel-1,:,oHd l«hmquu (Mai<iMun\ t.Jr.i!Uhood fl!,ld tSOOATA)fortheCIR and l&nduJt. 1n-.ap:ryand bfflt-.rth4n l:ht$pectfl;1 Antle MApper($AM)
ltthoJqutbtl1.1C,\Slin•r•fU:1•tly,a 'Wcb-1,,Jtdtool WU dew,lope:d Uling:ArclM$to diFFemirtattthe do'lta devdOf"!diromthu: m&d)'to
,t.tbholdets. '
CHAPTERS
CONCLUSION
In this study multispectral (CIR; ETM) and hyperspectral (CASI) images were
wetlands but only when spectral resolution was increased (i.e., 15-m 6-band Landsat
imagery achieved superior results over 1-m 3-band Color Infrared Aerial photography)
and the spatial resolution of the Landsat imagery was increased (Pan-sharpened from 30-
m to 15-m).
The results for Eddyville also clearly showed that hyperspectral images enabled
more accurate wetland mapping than multispectral datasets when using the object-
oriented classifier (94.6%) and the SAM classifier (79.3%). The object-oriented
classifier in this case also performed better than the pixel-based (SAM) classifier. A
seasonal comparison of Landsat imagery to identify wetlands did not produce accurate
results, perhaps due to extensive flooding present in the summer (July) imagery.
The answers to the research questions from Chapter 1, Page 7, are as follows:
3. The Object-Oriented Classifier was more accurate than the SAM classifier for
sensed imagery; however this study did not yield anticipated higher wetland detection
accuracies.
Black Hawk County were: (a) hydric soil; (b) proximity to surface hydrological features;
(c) proximity to existing wetlands; and (d) proximity to existing conservation areas
The results of the GIS-based model used in this study for wetland restoration in
Black Hawk County identified far more acres than initially believed were suitable for
such purposes (56% of county land area deemed unsuitable, 33% low suitability, 10%
medium suitability, 1% highly suitable). Two highly-suitable identified areas had already
Known sources of error include the fact that any wetland identified through
order to qualify for legal status or protection. Wetlands in Black Hawk County showed a
slight decrease of roughly 1500 acres(+/- an error margin of 375 acres) from 1983-2003.
A web site with an ArcIMS viewer was created in order to disseminate information to the
65
stakeholders involved in the study, as well as the general public. Information available
links, a comprehensive bibliography, as well as a technical report published for the Iowa
Space Grant Consortium. Available on the ArcIMS site is the ability to arrange different
multispectral imagery in the study area can be accurately completed if spatial resolution
is increased by data fusion, but not at the cost of spectral resolution. A non-parametric
object-oriented classifier can also identify freshwater inland wetlands for the study areas
of Black Hawk County and Eddyville more accurately than traditional pixel-based
accurately using hyperspectral imagery, but has limitations for large file sizes.
Limitations of the research include: (a) image availability for the seasonal matrix,
(b) classifying only a subset of the multispectral and hyperspectral imagery with the
object-oriented classifier, and (c) a limited number of variables used in the GIS-based
restoration model.
66
The future direction of this study lies in testing more non-parametric classifying
methods, such as a CART (classification and regression tree) algorithm since other
studies have shown it to be more accurate than a purely spectral based classifier
(Sugumaran, Pavuluri, & Zerr, 2003). In addition, greater long-term seasonality will also
detecting wetlands via remote-sensing imagery (Ozemi, 2000; Houhoulis & Michener,
2000). Future efforts for the restoration model include adding more variables, such as
land ownership, as well as field testing of high potential sites for evidence ofhydrophytic
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75
APPENDIX
MAPS
76
Class_Names - Mixed_Forest
D Wetland
Wetland
Class_Names . . Row_Crop
. . Mixed_Forest Artificial Surface
. . Mixed_Grasses . . Open_Water
s
CJ Wetland
0 3.5 7 14 Miles
0 40 BO 160 Meter s
-~,-'
LEGEND - Upland Crop
1111 Open Water (Wetland) - Flooded Fore st (Wetland)
Map 10: Black Hawk County Conservation Areas Layer Used in GIS-Based Model
86
- SSU RGO BH C •·
Map 12: NWI Wetl and Areas Layer Used in GIS -Based Restoration Model
88
-~~e':i~•···········-·=·1
.a•i ....:.:• !1•••••••••• 1111•111111
1111!" ~, . . . . . . . . . . . . . . . . . .~.
U••·····•• 1111!111
~' 11•• "•• n••••• ••• n
~-~'lli• ••···•-•.1•~1
!:i!'(]II -
iilll111• 1iil
••r~11:, ~,-~..c•••••11••••••1.1
tnJ~ .•_,
--IQ
--- ~
Ill~a11,. -
~ ~'
-, ~~-• ·-····
•lwai~---·-1 ..,...11.11•--·-·
-~• -Ila;,... ,, .
.,• - •• 111•• 1 "Ifill - •• l! •• -
1111.• •-»• ;)111·~...
:1••~!-•11••···-·~•·-··1
.iiiiiiii.::.:a:'. • -•.,....,.•••-
,,.-1-.. ·-----·--
'- ••------··
• -•1r~•· ,~. .• ,...~
r-1-• '!"
1•11111
I
•lf,1·-111111·~~1l =-••··
1• - • ll• ••'-°111.~Wlil •--
• a1-• II
1 • ••=1~1111111
11
~• . ,a-•-
••::••··••11••··••t1"_.,..1,_••·
•• I . . . . . . . . :.
•••••••••11•••• • • a...,.,....:rl~
• • ••••• •• ll• ••••• B1j~lL..a~
Map 13 : Landcover and Roads Buffer Mask Layer Used in GIS-Based Restoration
Model
89
Map 14: Low Suitability Potential Wetland Restoration Areas identified by GIS-Based
Model
90
Map 15: Medium Suitability Potential Wetland Restoration Areas identified by GIS-
Based Model
91
Map 16: High Suitability Potential Wetland Restoration Areas identified by GIS-Based
Model