Molecular inheritance NOTES
Molecular inheritance NOTES
Molecular inheritance NOTES
Revision Notes
CHAPTER- 06
MOLECULAR BASIS OF INHERITANCE
DNA (Deoxyribonucleic Acid) and RNA (Ribonucleic Acid) are two types of nucleic acid found
in living organisms. DNA acts as genetic material in most of the organisms. RNA also acts as
genetic material in some organisms as in some viruses and acts as messenger. It functions as
adapter, structural, and in some cases as a catalytic molecule
Cytosine is common for both DNA and RNA and Thymine is present in DNA. Uracil is present
in RNA at the place of Thymine.
A nitrogenous base is linked to pentose sugar with N-glycosidic linkage to form to form a
nucleoside. When phosphate group is linked 5’-OH of a nucleoside through phosphoester
linkage nucleotide is formed. Two nucleotides are linked through 3’-5’ phosphodiester
linkage to form dinucleotide. More nucleotide joins together to form polynucleotide.
In RNA, nucleotide residue has additional –OH group present at 2’-position in ribose and
uracil is found at the place of Thymine.
Structure differences
DNA RNA
(b) DNA contains cytosine and thymine as (b) RNA contains cytosine and
pyrimidine bases and guanine and adenine uracilpyrimidine bones and guanine and
is purine bases. adenine as purine bases.
(d) DNA molecules are very large their (d) RNA molecules are comparatively much
molecular mass may vary from smaller with molecular mass ranging from
20,000 – 40,000.
Functional differences
(a) DNA has uniqueproperty of replication. (a) RNA usually does not replicate.
Double Helix Model for Structure of DNA-James Watson and Francis Crick, based on X-ray
diffraction data produced by Wilkin and Rosalind proposed this model of DNA.
b) Two chains have anti-parallel polarity. One 5’à3’ and with 3’à5’.
c) The bases in two strands are paired through H-bonds. Adenine and Thymine forms double
hydrogen bond and Guanine and Cytosine forms triple hydrogen bonds.
d) Two chains are coiled in right handed fashion. The pitch of helix is 3.4 nm and roughly 10
bp in each turn.
e) The plane of one base pair stacks over the other in double helix to confer stability.
Francis Crick proposed the Central dogma in molecular biology, which states that the
genetic information flows from DNA -----> RNA ------> Protein.
In eukaryotes, histones, positively charged protein organized to form 8 molecules unit called
histone octomer. Negatively charged DNA is wrapped around the histone octomer to form
nucleosome. . Histones are rich in the basic amino acid residues lysines and arginines. Both
the amino acid residues carry positive charges in their side chains.
Single nucleosome contains about 200 base pairs. Chromatin is the repeating unit of
nucleosome.
In nucleus, some region of chromatin are loosely packed (and stains light) and are
referred to as euchromatin. The chromatin that is more densely packed and stains
dark are called as Heterochromatin. Euchromatin is transcriptionally active
chromatin, whereas heterochromatin is inactive.
Griffith concluded that R strain bacteria have somehow transformed by heat killed S strain
bacteria. Some transforming principles transferred from S strain to R strain and enabled the
R strain to synthesise a smooth polysaccharide coat and become virulent. This must be due to
the transfer of the genetic material.
Oswald Avery, Colin MacLeod and Maclyn McCarty worked out to determine the
biochemical nature of transforming principle of Griffith.
They purified biochemicals (proteins, DNA, RNA, etc.) from the heat-killed S cells to
see which ones could transform live R cells into S cells. They discovered that DNA
alone from S bacteria caused R bacteria to become transformed.So, they concluded
that DNA is the genetic material.
Alfred Hershey and Martha Chases (1952) worked with virus that infect bacteria called
bacteriophages.
In one preparation, the protein part was made radioactive and in the other, nucleic
acid (DNA) was made radioactive. These two phage preparations were allowed to
infect the culture of E.coli. Soon after infection, before lysis of cells, the E.coli cells
were gently agitated in a blender, to loosen the adhering phage particles and the
culture was centrifuged.
The heavier infected bacterial cells pelleted to the bottom and the lighter viral
particles were present in the supernatant. It was found that when bacteriophage
containing radioactive DNA was used to infect E.coli, the pellet contained
radioactivity.
If bacteriophage containing radioactive protein coat was used to infect E.coli, the
supernatant contained most of the radioactivity.
His experiment shows that protine does not enter the bacterial cell and only DNA is the
genetic material.
• DNA is chemically less reactive but strcturely more stable as compare to RNA. So, DNA is
better genetic material.
• RNA used as genetic material as well as catalyst and more reactive so less stable. Therefore,
DNA has evolved from RNA.
Replication of DNA
Watson and Crick suggested that two strands of DNA separate from each other and act as
template for synthesis of new complementary strands. After the completion of replication
each DNA molecule would have one parental and one newly synthesised strand, this method
is called semiconservative replication.
15N was incorporated into both the strands of DNA and such a DNA was heavier than
the DNA obtained from E.coli grown on a medium containing 14N. Then they
Replication : Replication of DNA require Enzyme DNA polymerase that catalyse the
polymerisation in one strand 5’à3’ only after unwinding with the help of Helicase enzyme .
So, replication in one stand is continuous and other strand it is discontinuous to synthesise
okazaki fragments that are joined together by enzyme DNA ligase.
2. RNA It requires only one primer Every fragment requires separate RNA primer
primer to initiate the growth. to initiate.
3. DNA
Not required. Required to join DNA fragments.
ligase
It is the process of copying genetic information from one strand of DNA into RNA. In
transcription only one segment of DNA and only one strand is copied in RNA. The
Adenosine forms base pair with Uracil instead of Thymine.
• Transcription of DNA includes a promoter, the structural gene and a terminator. The
strands that has polarity 3’à5 act as template and called template strand and other strand is
called coding strand.
It is a DNA strand with 3' 5' Polarity. DNA Strand with 5' 3' Polarity
Acts as template for transcription and Does not code for any region of RNA during
codes for RNA transcription.
Promoter is located at 5’ end and that bind the enzyme RNA polymerase to start
transcription. Sigma factor also help in initation of transcription .The terminator is located at
3’end of coding strand and usually defines the end of transcription where rho factor will
bind to terminate transcription.
In eukaryotes, there are three different RNA polymerase enzymes I, II and III, they
catalyse the synthesis of all types of RNA.
The m-RNA provide the template, t-RNA brings the amino acids and read the genetic code,
the r-RNA play structural and catalytic role during translation.
The primary transcript contains both exon and intron and is non-functional. It undergoes the
process of splicing in which introns are removed and exons are joined in a defined order.
The hnRNA (heterogeneous nuclear RNA) undergo additional processing called as capping
and tailing. In capping in unusual nucleotide (methylguanosine triphosphate) to the 5’end of
hnRNA. In tailing polyadenylatelate tail is added at 3’end in a template at independent
manner.
Genetic Code : Genetic Code is the relationship of amino acids sequence in a polypeptide and
nucleotide/base sequence in mRNA. It directs the sequence of amino acids during synthesis
of proteins.
George Gamow suggested that genetic code should be combination of 3 nucleotides to code
20 amino acids.
H.G. Khorana developed chemical method to synthesising RNA molecules with defined
combination of bases.
Marshall Nirenberg’s cell free system for protein synthesis finally helped the code to be
deciphered.
i. The code is triplet. 61 codons code for amino acids and 3 codons do not code for any amino
acids called stop codon (UAG, UGA and UAA).
ii. Codon is unambiguous and specific, code for one amino acid.
iv. The codon is read in mRNA in a contiguous fashion without any punctuation.
v. The codon is nearly universal. AUG has dual functions. It codes for methionine and also
act as initiator codon.
A change of single base pair (point mutation) in the 6th position of Beta globin chain of
Haemoglobin results due to the change of amino acid residue glutamate to valine. These
results into diseased condition called sickle cell anaemia.
Insertion and deletion of three or its multiple bases insert or delete one or multiple codons
hence one or more amino acids and reading frame remain unaltered from that point
onwards. Such mutations are called frame-shift insertion or deletion mutations.
The t-RNA called as adaptor molecules. It has an anticodon loop that has bases
complementary to code present on mRNA and also has an amino acid acceptor to which
amino acid binds. t-RNA is specific for each amino acids.
The secondary structure of t-RNA is depicted as clover-leaf. In actual structure, the t-RNA is a
compact molecule which look like inverted L.
a) Charging of t-RNA.
• The start codon is AUG. An mRNA has some additional sequence that are not translated
called untranslated region (UTR).
• For initiation ribosome binds to mRNA at the start codon. Ribosomes moves from codon to
codon along mRNA for elongation of protein chain. At the end release factors binds to the
stop codon, terminating the translation and release of polypeptide form ribosome.
Lac operon consists of one regulatory gene (i ) and three structural genes (y,z and a). Gene i
code for the repressor of the lac operon. The z gene code for beta-galactosidase, that is
responsible for hydrolysis of disaccharide, lactose into monomeric units, galactose and
glucose. Gene y code for permease, which increases permeability of the cell. Gene a encode
for transacetylase.
Human Genome Project was launched in 1990 to find out the complete DNA sequence of
human genome using genetic engineering technique and bioinformatics to isolate and clone
the DNA segment for determining DNA sequence.
Goal of HGP-
• The project was coordinated by the US Department of Energy and the National Institute of
health.
• The method involved the two major approaches- first identifying all the genes that express
as RNA called Express sequence tags(EST).The second is the sequencing the all set of genome
that contained the all the coding and non-coding sequence called sequence Annotation.
DNA finger printing is a very quick way to compare the DNA sequence of any two individual.
It includes identifying differences in some specific region in DNA sequence called as
repetitive DNA because in this region, a small stretch of DNA is repeated many times.
Depending upon the base composition, length of segment and number of repetitive units
satellite DNA is classified into many categories.
Polymorphism in DNA sequence is the basis for genetic mapping of human genome as well
as fingerprinting.
The technique of fingerprinting was initially developed by Alec Jeffrey. He used a satellite
DNA as probe to so high polymorphism was called Variable Number of Tendon Repeats
(VNTR).
Evolutionary biology is the study of history of life forms on earth. The evolution of life on
earth, different changes in flora and fauna around earth that co-exist along with human
beings also forms parts of evolution.
Origin of Life
The origin of life is considered unique events in the history of universe. Huge cluster of
galaxies comprises the universe. Galaxies contain stars and clouds of dust and smoke.
Big Bang Theory attempts to explain the origin of universe. According to this theory, a huge
explosion occurs that forms the different galaxies.
In solar system of Milky Way galaxies, earth has been supposed to be formed about 4.5
billion years ago. There was no atmosphere in early earth. Water vapour, methane, carbon
dioxide and ammonia released from molten mass covered the earth surface.
UV rays from sun splits the water into hydrogen and oxygen. Life appeared 500 million years
after the formation of earth.
Some scientist believes that life comes from other planets. Early Greek thinker
thoughts that unit of life is called spores transferred from other planets.
According to other theory, life comes out of dead and decaying matters like straw and
mud. This theory is called theory of spontaneous origin.
Louis Pasture experimentally proved that life arises only from pre-existing life.
Spontaneous theory of origin of life is dismissed after that.
Oparin and Haldane proposed that the first form of life could have come from pre-
existing non-living organic molecules like RNA and protein etc. The formation of life
preceded by chemical evolution. At that time condition on earth were- high
Miller experiment of Origin of Life- S.L. Miller in 1953, conducted an experiment to show the
origin of life on earth in the physical environment similar to condition prevails at that time.
Miller created similar condition of temperature and pressure in laboratory scale. He created
electric discharge in a flask containing CH4, H2 and NH3 and water vapour at 8000C.
He observed formation of amino acids in flask after 15 days of electric discharge. Similar
experiment by other scientist found formation of sugars, nitrogen bases, pigments and fats.
Analysis of meteorite content also reveals similar compounds that reveal that similar process
are occurring elsewhere in the space. This experimental evidence about the origin of life is
called chemical evolution of life.
The first non-cellular forms of life could have originated 3 billion years back. They could
have been giant molecules like RNA, Protein, and Polysaccharide etc.
The cellular form of life was probably single cell and originates in water medium. The theory
that first form of life arose slowly through evolutionary forces from non-living molecules is
called biogenesis.
Evidence of Evolution: Evidence that evolution of life forms has taken place on earth have
many proofs as mentioned below-
1. Paleontological evidence- different aged rock sediments contain fossils of different life
2. Homologous organs- those organs that perform different function but have similar origin
and structure are called homologous organs. For example human, cheetah, bat and whales
share similarities in pattern of bones of forelimbs although these forelimbs perform
different functions in these animals. In these animal similar structure developed along
different directions due to adaptation of different needs. This is called divergent evolution.
3. Analogous structures-they are not anatomically similar organs but perform similar
function. For example eyes of mammals and octopus or flippers of penguin and dolphins.
This is due to similar habitat that resulted in similar adaptive features in different groups of
organisms. This that of evolution is called convergent evolution.
When DDT was introduced to control mosquitoes it was tremendously successful. Most of the
mosquitoes were sensitive to DDT and were therefore killed. In that population of
mosquitoes, few mosquitoes became resistant to DDT and survived. They multiplied and now
almost total population of mosquitoes became resistant to DDT.
Adaptive Radiation- the process of evolution of different species in given geographical area
starting from a point and radiating to other areas of geography (habitat) is called adaptive
radiation. Darwin’s finches represent one of the best examples of adaptive radiation.
Australian marsupials, each with different from other evolved from one ancestral stock, but
all within Australian island continents.
When more than one adaptive radiation appeared to have occurred in an isolated
geographical area (representing different habitats), we can call this convergent evolution e.g
Placental mammals and Australian marsupials.
Biological Evolution – the nature select for fittest and fitness is based on characteristics
which are inherited. Some organisms are better adopted to survive in otherwise hostile
environment. Fitness is the end result of the ability to adopt and get selected by nature.
Lamarck had said that evolution of life form had occurred but driven by use and disuse of
organs. He gave the example of giraffe to evolve their neck by foraging leaves on tall trees
and had to adapt by elongation of their necks.
Branching descent and natural selection are the two key concepts of Darwinian Theory of
Evolution .Darwin theory of natural selection was based on certain observations like-
Mechanism of Evolution
Hugo deVries based on his work on evening primrose brought forth the idea of mutation.
Mutation is the large difference arising suddenly in a population.
Mutations are random and directionless while Darwin variations are small and directional.
Hugo deVries believed that mutation causes speciation and hence called saltation (single step
Variations appear in
organisms in response to
Variations appear due
Origin of change in environment, Variations appear
to change in genetic
Variations conscious reaction, automatically.
make up.
desire r use and disuse
of organs.
This principle states that allele frequencies in a population are stable and is constant from
generation to generation. The gene pool remains constant. This is called genetic equilibrium
and sum total of all the allelic frequencies is 1.
Binomial expansion of (p+q)2 = p2+2pq+q2=1 where p and q represent the frequency of allele
A and allele a in a population . The frequency of AA individuals in a population is simply p2 .
This is simply stated in another ways, i.e., the probability that an allele A with a frequency of
p appear on both the chromosomes of a diploid individual is simply the product of the
probabilities, i.e., p2 . Similarly of aa is q2 , of Aa 2pq. Hence, p2+2pq+q2=1.
When frequency is measured, the actual value varies that indicates the extent of
evolutionary changes. Change of frequency in a alleles (Hardy-Weinberg equilibrium) in a
population resulted due to evolution.
About 2000 million ago first cellular form of life appeared on earth.
Slowly single-celled organisms became multi-cellular forms and by the time 500 mya,
invertebrates were formed and active.
Jawless fish evolved around 350 mya.
Organisms started to invade from water to land. Fish with stout and strong fins could
move on land and go back to water These animals called lobefins evolved into the first
amphibians.
Later, these amphibians evolved into reptiles. They lay shelled eggs. Then reptiles of
different shapes and sizes dominated on earth , fish like reptiles e.g. Ichthyosaurs and
the land reptiles e.g dinosaurs. The biggest of them was Tyrannosaurus rex.
Some of the reptiles evolved into birds and later some of them to mammals. Mammals
were viviparous and more intelligent in sensing and avoiding danger .