INTRO TO ORGANIC CHEMISTRY (2)
INTRO TO ORGANIC CHEMISTRY (2)
INTRO TO ORGANIC CHEMISTRY (2)
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There is an almost infinite variety of chains, branches and rings able to form
A functional group is a specific atom or group of atoms which confer certain physical and chemical
properties onto the molecule
Organic molecules are classified by the dominant functional group on the molecule
Organic compounds with the same functional group, but with each successive member different by
CH2 are called a homologous series
Every time a carbon atom is added to the chain, two hydrogen atoms are also added, which is why
the successive members differ by CH2
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Hydrocarbons
Hydrocarbons are compounds that are made up of carbon and hydrogen atoms ONLY Your notes
Exam Tip
You must state that hydrocarbons are ‘only’ made up of C and H atoms if defining this term in an exam
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Alkanes
A functional group is an atom or a group of atoms in an organic molecule, which determines the Your notes
physical and chemical properties of the molecule
Alkanes are the simplest hydrocarbons with no functional group
They are made up of carbon and hydrogen atoms bonded to each other with single covalent bonds
Alkanes are compounds made up of carbon and hydrogen atoms only and contain no functional group
Homologous Series of Alkanes Table
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Your notes
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Your notes
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Your notes
If there are any side-chains or functional groups present, then the position of these groups are
indicated by numbering the carbon atoms in the longest chain starting at the end that gives the lowest
possible numbers in the name
The hydrocarbon side-chain is shown in brackets in the structural formula
CH3CH(CH3)CH2CH3
The side-chain is named by adding ‘-yl’ to the normal alkane stem
This type of group is called an alkyl group
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Your notes
If there are more than one of the same alkyl side-chain or functional groups, di- (for two), tri- (for three)
or tetra- (for four) is added in front of its name
The adjacent numbers have a comma between them
Numbers are separated from words by a hyphen
If there is more than one type of alkyl side-chain, they are listed in alphabetic order
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Your notes
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Exam Tip
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An aliphatic compound is straight or branched-chain and also includes cyclic organic compounds
that do not contain a benzene ring.
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Your notes
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Your notes
The diagram shows saturated hydrocarbons which contain single bonds only and unsaturated
hydrocarbons which contain double/triple bonds as well
Homolytic & heterolytic fission
Homolytic fission is breaking a covalent bond in such a way that each atom takes an electron from the
bond to form two radicals
Heterolytic fission is breaking a covalent bond in such a way that the more electronegative atom takes
both the electrons from the bond to form a negative ion and leaving behind a positive ion
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Your notes
The diagram shows heterolytic fission in which the most electronegative atom takes both electrons in
the covalent bond and homolytic fission in which each atom takes one electron from the covalent bond
Radical chain reactions
A free radical is a species with one (or more than one) unpaired electrons
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The diagram shows a free radical which has one unpaired electron
A free radical reaction is a reaction involving free radicals and is a three-step reaction: Your notes
Initiation is the first step and involves breaking a covalent bond using energy from ultraviolet (UV)
light from the sun to form two free radicals
The propagation step is the second step in which the formed radical can attack reactant
molecules to form even more radicals
These in turn can again attack other molecules to form more free radical and so on
In the termination step, two free radicals react together to form a product molecule
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Your notes
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Your notes
In organic chemistry oxidation is often the gain of oxygen or loss of hydrogen atoms and reduction is the
gain of hydrogen and loss of oxygen atoms
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Curly arrows show electron pairs moving from the source (eg. a nucleophile) to its destination (eg. an
electrophile)
Free-radical substitution
A free-radical substitution reaction is a reaction in which halogen atoms substitute for hydrogen
atoms in alkanes
It involves the initiation, propagation and termination steps
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Your notes
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The nucleophile has a lone pair of electrons that it can donate to the δ+ carbon atom and form a
covalent bond
This causes the displacement of the halogen atom, X, which leaves as a halide ion, X– Your notes
The displaced halide ion is known as a leaving group
Nucleophilic addition
A nucleophilic addition reaction is a reaction in which a nucleophile (a species that likes a
nucleus/positive charge) attacks an electron-deficient region in a molecule followed by the addition
of a small molecule to give one product only
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Pentane is a straight-chain organic molecule as the carbon atoms are connected in a straight line
Branched
Branched organic molecules have side groups attached to the main chain of carbon atoms
2-methylbutane is a branched organic molecule as the main chain (consisting of 4 carbon atoms) has a
methyl branch
Cyclic
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Cyclic organic molecules are those in which the carbon atoms are connected to each other in a ring
shape
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Cyclopentane is a cyclic organic molecule as the carbons are attached to each other in a ring structure
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The diagram shows a molecule of ethane in which each carbon atom forms four σ bonds to adopt a
tetrahedral configuration and minimise the repulsion between the bonding pairs of electrons
Hybridisation: sp2
When carbon atoms use only three of their electron pairs to form a σ bond, they are said to be sp2
hybridised
Each carbon atom will have a p orbital with contains one spare electron
When the p orbitals of two carbon atoms overlap with each other, a π bond is formed (the π bond
contains two electrons)
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The two orbitals that form the π bond lie above and below the plane of the two carbon atoms to
maximise bond overlap
The three bonding pair of electrons are in the plane of the molecule and repel each other Your notes
The molecule adopts a planar arrangement with bond angles of 120 o
The overlap of the two p orbitals results in the formation of a π bond in ethene (sp2 hybridised molecule)
in which the bonding pair of electrons repel each other to force the molecule into a planar configuration
with bond angles of 120 o
Hybridisation: sp
Carbon atoms can also use only one of their electron pair to form a σ bond, in which case the carbon
atoms are said to be sp hybridised
Each carbon atom will have two p orbitals with one spare electron each
When the four p orbitals of the carbon atoms overlap with each other, two π bonds are formed (each π
bond contains two electrons)
The two orbitals that form the π bond lie above and below the plane of the carbon atoms
The two orbitals of the other π bond lie in front and behind the plane of the atoms
This maximises the overlap of the four p orbitals
The molecule adopts a linear arrangement with bond angles 180 o
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Your notes
The overlap of the p orbitals results in the formation of two π bonds in ethyne (sp hybridised molecule)
which adopts a linear arrangement with bond angles of 180
Exam Tip
A double bond is a combination of a σ and π bond and a triple bond is a combination of one σ and two
π bonds.The strength of the bonds increases as follows: single < double < triple bondThis is due to the
increased electron density around the C-C atom, making the bond stronger and more difficult to
break.
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Your notes
The σ orbitals are formed from the end-on overlap of the atomic orbitals resulting in symmetrical
electron density on the atoms
π bonds
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Your notes
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Your notes
The π orbitals are formed from the sideway overlap of the atomic orbitals
Exam Tip
π bonds are drawn as two electron clouds, one arising from each lobe of the p orbitals.The two clouds
of electrons in a π bond represent one bond consisting of two electrons (one from each orbital).
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Your notes
Ethene is a planar molecule with two trigonal planar centres around the carbon atoms
Eg. propene
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Your notes
Propene has two trigonal planar centres around the carbon-carbon double bond and one tetrahedral
centre
The presence of an sp hybridised carbon can also force the molecule to adopt a planar configuration
(linear)
The 2 σ bonds position themselves in a linear position to minimise the repulsion between the bonding
pairs of electrons
For example, ethyne
Ethyne is a planar molecule with one planar centre: the molecule is linear
Eg. propyne
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Your notes
Propyne has one planar centre around the carbon-carbon triple bond (linear) and one tetrahedral
centre
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Both propene and cyclopropane are made up of 3 carbon and 6 hydrogen atoms but the structure of the
two molecules differs
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Your notes
Both compounds are made up of the same atoms however the longest carbon chain in pentane is 5 and
in 2,2-dimethylpropane 3 (with two methyl branches)
Positional isomerism
Positional isomers arise from differences in the position of a functional group in each isomer
The functional group can be located on different carbons
For example, butanol and 2-butanol
Both compounds have an alcohol group and are made up of 4 carbon, 10 hydrogen and one oxygen
atom however in butanol the functional group is located on the first carbon and in 2-butanol on the
second carbon
Functional group isomerism
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When different functional groups result in the same molecular formula, functional group isomers arise
The isomers have very different chemical properties as they have different functional groups
For example, butanol and ethoxyethane Your notes
Both compounds have the same molecular formula however butanol contains an alcohol functional
group and ethoxyethane an ether functional group
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3.1.11 Stereoisomerism
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Stereoisomerism: Geometrical & Optical
What is stereoisomerism?
Stereoisomers are compounds that have the same atoms connected to each other, however the
atoms are differently arranged in space
There are two types of stereoisomerism:
Geometrical (cis/trans) isomerism
Optical isomerism
Types of stereoisomerism
Geometrical (cis/trans) isomerism
Geometrical isomerism is seen in unsaturated (double bond containing) or ring compounds that have
the same molecular formula and order of atoms (the atoms are connected similarly to each other) but
different shapes
Cis/trans nomenclature is used to distinguish between the isomers
Cis isomers have functional groups on the same side of the double bond/carbon ring
Trans isomers have functional groups on opposite sides of the double bond/carbon ring
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Your notes
This causes the compounds to have different chemical and physical properties
For example, they may have different reaction rates for the same reaction (chemical property) or
different melting/boiling points (physical property)
Optical isomerism
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Optical isomers arise when a carbon atom in a molecule is bonded to four different atoms or groups of
atoms
The carbon atom is ‘asymmetric’ as there is no plane of symmetric in the molecule and is also called the Your notes
chiral centre of the molecule
The two different optical isomers are also called enantiomers
Just like the left hand cannot be superimposed on the right hand, enantiomers too are non-
superimposable
Enantiomers are mirror images of each other
Both molecules are made up of the same atoms which are bonded to each other identically, however
the chiral centre (carbon with four different groups) gives rise to optical isomerism
Optical isomers differ in their ability to rotate the plane of polarised light
One enantiomer will rotate it clockwise and the other anticlockwise
A2 only
Normal light is unpolarised and consists of electric and magnetic fields that vibrate at right angles to
each other in every possible direction
When the unpolarised light passes through a polariser, the light gets polarised causing it to vibrate in
only one plane
A pair of optical isomers will rotate the plane of polarised light by equal amounts in opposite direction
When equal amounts of the enantiomers are present in solution, the plane of polarised light doesn’t
change
As the enantiomers cancel out each other’s effect
A solution with equal amounts of both enantiomers is also called a racemic mixture
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Your notes
Light consists of vibrations in all possible directions however when it passes through a polariser the light
gets polarised and vibrates in only one plane: enantiomers cause the plane of polarised light to rotate
clockwise or anticlockwise
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The presence of a π bond in unsaturated compounds restricts rotation about the C=C bond forcing the
groups to remain fixed in their position and giving rise to the formation of geometrical isomers
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3.1.12 Chirality
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Chirality & Enantiomers
Chiral centres in non-cyclic molecules
A chiral centre in a molecule is a carbon atom that has four different atoms or group of atoms attached
This gives rise to two optical isomers which are also called enantiomers
The enantiomers are mirror images of each other and cannot be superimposed
The presence of the chiral centre in the molecule allows two enantiomers to exist which are
stereoisomers as the molecules have the same atoms bonded to each other, but they are differently
arranged in space
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When the molecule contains more than one chiral centre (asymmetric carbon) more than two optical
isomers will be formed Your notes
If there are two chiral centres, each chiral centre will rotate the plane of polarised light clockwise
and anticlockwise
There are four possible optical isomers
Each chiral centre gives rise to two optical isomers; therefore, the molecule has a total of four optical
isomers
Chiral centres in cyclic molecules
To determine the chiral centre in a cyclic molecule, the carbon bonded to four different atoms or
groups of atoms should be found
Eg. 1,2-aminocyclohexanol has two chiral centres so it can form four optical isomers
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Your notes
To decide where the chiral centres are in a cyclic molecule, the carbon atoms bonded to four different
atoms or atom groups should be found
Exam Tip
Use a molecular modelling kit and make the models of enantiomers to help you understand that the
two molecules are non-superimposable and therefore non-identical.
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Your notes
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Answer
Step 1: Draw the structural formula of the compound
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Your notes
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