Bio 102 L2
Bio 102 L2
Bio 102 L2
2. Structure of Prokaryotes
3. Prokaryotic Metabolism
5. Beneficial Prokaryotes
KINGDOM MONERA
Nutrition
Prokaryotes are very well equipped to make their living out of a vast array
of nutrients and conditions. To live, prokaryotes need a source of energy, a
source of carbon, and some additional nutrients.
For cells to build all of the molecules required to sustain life, they need
certain substances, collectively called nutrients.
Elements considered to be macronutrients—carbon, hydrogen, oxygen,
nitrogen, phosphorus, and sulfur. They are the components of organic
compounds in cells, including water.
Carbon is the major element in all macromolecules: carbohydrates,
proteins, nucleic acids, lipids, and many other compounds.
prokaryotes require various metallic elements in small amounts.
These are referred to as micronutrients or trace elements. For example,
iron is necessary for the function of the cytochromes involved in electron-
transport reactions.
• The four nutritional categories found in bacteria are :
• (i) Autotrophs - synthesize their own organic food.
• (ii) Saprotrophs - feed on dead and decaying matter.
• (iii) Symbionts - use food from other living organisms
with which they are associated for mutual benefit.
• (iv) Parasites - absorb food from living organisms
and cause harm to them.
Classification Based on how they obtain food
1. Autotrophic bacteria -can make their own food
2. Heterotrophic bacteria -cannot make their own food. Must absorb nutrients.
• Autotrophic bacteria can be further divided into
A. Photoautotrophs
• They are photosynthetic
• They use solar energy to reduce C02 to organic compounds
• There are 2 types of photosynthetic bacteria
• a) Those that do NOT give off 02
• Possess a unique kind of chlorophyll called bacterio-chlorophyll
• Examples are green sulphur bacteria and purple bacteria
• These bacteria usually live in anaerobic conditions such as the muddy bottom of
a marsh
• They do not use H20 as an electron donor (like plants) and therefore do not give
off 02
• Instead of H20 they may use hydrogen sulfide (H2S )
• Simple formula can be written as: C02 + 2 H2S --> (CH20)n + 2 S
Cont’d
• Those that give off 02
• Contain chlorophyll a, like most all algae and multi-cellular plants
• Carry on photosynthesis like algae and plants by using H 2O to reduce C02 to
a organic compound and release 02 into the atmosphere.
• Example include blue-green algae (Cyanobacteria) in Kingdom Monera
• • Simple formula can be written as: C02 + 2 H2O --> (CH20)n + 02
B. Chemoautotrophs
• Are chemosynthetic
• To obtain the energy needed to reduce C0 2 into an organic compound
(food), by oxidizing an inorganic compound like hydrogen gas, hydrogen
sulfide, and ammonia
• Nitrifying bacteria keep nitrogen cycling through ecosystems by oxidizing
ammonia into nitrites(No2) and nitrates(No3)
• Other examples of chemosynthetic bacteria include those that live in the
deep ocean vents
2.Heterotrophic bacteria
• A. Saprotrophs
• Are called heterotrophs because they take in or absorb organic nutrients. They do not
make their own food
• They are aerobic saprotrophs
• They can decompose almost any molecule into smaller molecules that can be absorbed
through their cell wall and plasma membrane
• In ecosystems, saprotrophic bacteria are called decomposers
• The deep piles of leaves left from Fall are decomposed with the help of these
decomposers
• The dead bodies of plants and animals are decomposed with the help of these
decomposers
• B. Symbiotic Bacteria
• Uses food from other living organisms with which they are associated for mutual
benefit.
• Certain species of bacteria live in the intestines of humans and produce vitamins K and
B12.
• Humans provide the bacteria a place to live and grow, while the bacteria provide
humans with needed vitamins
C. Parasitic bacteria
• Absorb food from living organisms and cause harm to them.
• Parasitic bacteria that cause disease are called pathogens
• The growth of pathogens or the microbes themselves does not
normally cause disease, it is the poisonous substances pathogens
releases are normally the cause of diseases.
• These poisonous substances are called toxins.
Respiration
• Respiration in bacteria may be either
i. aerobic i.e. using oxygen for respiration or
ii. anaerobic i.e. respiration in the absence of oxygen.
• Cellular respiration or breakdown of food to release energy
occurs in mesosomes
• These are the inner extensions of the cell membrane.
PROKARYOTIC DIVERSITY
Reproduction in prokaryotes is
asexual and usually takes place by
binary fission.
The DNA of a prokaryote exists as a
single, circular chromosome.
Prokaryotes do not undergo mitosis,
but the chromosome is replicated
and the two resulting copies
separate from one another, due to
the growth of the cell.
The enlarged prokaryote, now is
pinched inward at its equator and
the two resulting cells, which are
clones, separate.
Prokaryotes mechanism of gene transfer
• Binary fission does not provide an
opportunity for genetic recombination
or genetic diversity, but prokaryotes
can share genes by three other
mechanisms.
1. Transformation: The prokaryote
takes in DNA found in its
environment that is shed by other
prokaryotes.
• If a nonpathogenic bacterium takes
up DNA for a toxin gene from a
pathogen and incorporates the new
DNA into its own chromosome, it too
may become pathogenic.
Transduction:
• Bacteriophages are the viruses
that infect bacteria, sometimes
also move short pieces of
chromosomal DNA from one
bacterium to another.
• A bacteriophage injects DNA
into the cell that contains a
small fragment of DNA from a
different prokaryote.
• Transduction results in a
recombinant organism.
3. Conjugation
• DNA is transferred from one
cell to another via a mating
bridge that connects the two
cells by means of a pilus,
which brings the organisms
into contact with one another
close enough to form the
bridge
• The DNA transferred can be in
the form of a plasmid or as a
hybrid, containing both
plasmid and chromosomal
DNA.
Terminologies of spread of diseases in
Humans
Epidemiologists study how diseases affect a
population.
An epidemic is a disease that occurs in an
unusually high number of individuals in a
population at the same time.
A pandemic is a widespread, usually worldwide,
epidemic.
An endemic disease is a disease that is constantly
present, usually at low incidence, in a population.
Transmission(SPREAD)
Many human diseases are caused by bacteria.
Most disease-producing bacteria use their host for food,
but some poison their hosts.
To cause disease in humans, bacteria or poison they
produce must first get into the body.
Through contaminated food or water.
Inhalation of bacteria present in the air after an infected
person sneezes or coughs, touch a contaminated object,
Sexual intercourse with an infected partner.
Through broken skin as a result of an injury or injection
with a contaminated needle.
BIOFILMS AND DISEASE
A biofilm is a microbial community held together in a gummy-
textured matrix that consists primarily of polysaccharides secreted
by the organisms, together with some proteins and nucleic acids.
Biofilms grow attached to surfaces.
Biofilms are present almost everywhere: they can cause the
clogging of pipes and readily colonize surfaces in industrial settings.
They also colonize household surfaces, such as kitchen counters,
cutting boards, sinks, and toilets, as well as places on the human
body, such as the surfaces of our teeth.
The sticky substance that holds bacteria together also excludes
most antibiotics and disinfectants.
Overall, biofilms are very difficult to destroy because they are
resistant to many common forms of sterilization.
Cont’d
They are responsible for diseases such as
infections in patients with cystic fibrosis, and
otitis media.
They produce dental plaque and colonize
catheters, orthopedic devices, contact lenses,
etc.
They also form in open wounds and burned
tissue.
In healthcare environments, biofilms grow on
hemodialysis machines, mechanical ventilators,
and other medical equipment.
In fact, 65 percent of all infections acquired in
the hospital (nosocomial infections) are
attributed to biofilms.
Biofilms are also related to diseases contracted
from food because they colonize the surfaces of
vegetable leaves and meat, as well as food-
processing equipment that is not
adequately cleaned
FOODBORNE DISEASES
Prokaryotes are everywhere: They readily colonize the surface of any type
of material, and food is not an exception.
Outbreaks of bacterial infection related to food consumption are common.
A foodborne disease (colloquially called “food poisoning”) is an illness
resulting from the consumption of the pathogenic bacteria, viruses, or
other parasites that contaminate food.
In the past, it was relatively common to hear about sporadic cases of
botulism, the potentially fatal disease produced by a toxin from the
anaerobic bacterium Clostridium botulinum.
Some of the most common sources for this bacterium were non-acidic
canned foods, and processed meat and sausages.
The can, jar, or package created a suitable anaerobic environment where
Clostridium could grow.
Proper sterilization and canning procedures have reduced the incidence of
this disease.
Formation of Endospores
Bacteria as decomposers
• Soil fertility
– Nitrifying bacteria –Nitrosomonas&Nitrobacter
– Ammonifying bacteria
– Nitrogen fixing type of bacteria-Rhizobium leguminosarum, Clostridium
&Azotobacter
Food that use bacteria in their production include
– Soy sauce-Pediococcusspecies
– Cheese-Lactobacillus
– Vinegar-Acinetobacter species
Bacteria in various industries
• Fibre retting(helps dissolve or away much of the cellulartissues & pectins)
– Clostridium felsineum&Clostridium pectinovorum
Industrial production of organic compound
– Acetone & Isopropanol-Clostridium species
– Acrylic acid &Proplene Glycol- Bacillus species
Bacteria in dairy products
• Lactic acid bacteria
Cont’d
Bacteria in the production of vitamins
– Riboflavin (Vitamin B) - Clostridium butylicum
– Cobalamine (Vitamin B12) -Pseudomonas denitrificans
Bacteria in the production of antibiotics
– Bacitracin- Bacillus subtilis
– Aureomycin – Streptomyces species
– Terramycin – Streptomyces rimosus
– Streptomycin-Streptomyces griseus
Bacteria in the production of enzymes
– Streptokinase-Streptococcus pyogenes
– Proteokinase- Bacillus subtilis
– Amylase-Bacillus species
Bacteria in the production of Steroids
– Cornyebacterium&Streptomyces
Bioremediation
Microbial bioremediation is the use of prokaryotes (or microbial
metabolism) to remove pollutants.
Bioremediation has been used to remove agricultural chemicals
(pesticides, fertilizers) that leach from soil into groundwater and the
subsurface.
Certain toxic metals and oxides, such as selenium and arsenic compounds,
can also be removed from water by bioremediation.
Mercury is an example of a toxic metal that can be removed from an
environment by bioremediation.
Methyl mercury is usually present in very low concentrations in natural
environments, but it is highly toxic because it accumulates in living tissues.
Several species of bacteria can carry out the biotransformation of toxic
mercury into nontoxic forms. These bacteria, such as Pseudomonas
aeruginosa, can convert Hg2 into Hg0, which is nontoxic to humans.
One of the most useful and interesting examples of the use of prokaryotes
for bioremediation purposes is the cleanup of oil spills.
Kingdom Protista
• This kingdom is made up of a group of eukaryotic organisms
which are mostly aquatic in nature and are found in the
moist places.