Host cell-dependent expression of latent Epstein-Barr virus genomes: regulation by DNA methylation (Q34273467)

1 August 2017

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title

Host cell-dependent expression of latent Epstein-Barr virus genomes: regulation by DNA methylation (English)

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1 August 2017

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Hul Li

1

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1 August 2017

Janos Minarovits

series ordinal

2

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1 August 2017

publication date

1 January 2003

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Advances in Cancer Research

1 August 2017

published in

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1 August 2017

volume

89

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1 August 2017

page(s)

133-156

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https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

1 August 2017

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EBV persistence in memory B cells in vivo.

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Tonsillar memory B cells, latently infected with Epstein-Barr virus, express the restricted pattern of latent genes previously found only in Epstein-Barr virus-associated tumors

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Methylation-induced repression--belts, braces, and chromatin

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Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein, EBNA1, bound to DNA.

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Alternate replication in B cells and epithelial cells switches tropism of Epstein-Barr virus

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Inhibition of herpes simplex thymidine kinase gene expression by DNA methylation is an indirect effect.

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Chromatin structure is required to block transcription of the methylated herpes simplex virus thymidine kinase gene

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Epstein-Barr virus LMP2A drives B cell development and survival in the absence of normal B cell receptor signals

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Nasal T/natural killer (NK)-cell lymphomas are derived from Epstein-Barr virus–infected cytotoxic lymphocytes of both NK- and T-cell lineage

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Binding of Epstein-Barr virus small RNA EBER-1 to the double-stranded RNA-activated protein kinase DAI.

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Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites

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CpG methylation inhibits proenkephalin gene expression and binding of the transcription factor AP-2

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Epstein-Barr virus latent membrane protein inhibits human epithelial cell differentiation

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Matrix attachment regions are positioned near replication initiation sites, genes, and an interamplicon junction in the amplified dihydrofolate reductase domain of Chinese hamster ovary cells

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In vitro selection of RNA ligands for the ribosomal L22 protein associated with Epstein-Barr virus-expressed RNA by using randomized and cDNA-derived RNA libraries

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Reflections on Epstein-Barr virus: some recently resolved old uncertainties

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The role of methylation in the phenotype-dependent modulation of Epstein-Barr nuclear antigen 2 and latent membrane protein genes in cells latently infected with Epstein-Barr virus

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Expression of Epstein-Barr virus-encoded proteins in nasopharyngeal carcinoma.

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Epstein-Barr virus-encoded nuclear antigen 2 activates the viral latent membrane protein promoter by modulating the activity of a negative regulatory element

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Morphological transformation of human keratinocytes expressing the LMP gene of Epstein Barr virus

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An origin of DNA replication (oriP) in highly methylated episomal Epstein-Barr virus DNA localizes to a 4.5-kb unmethylated region

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Mapping of structural and transcription-related matrix attachment sites in the alpha-globin gene domain of avian erythroblasts and erythrocytes.

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A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

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Regulation of the Epstein-Barr virus C promoter by AUF1 and the cyclic AMP/protein kinase A signaling pathway.

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The Epstein-Barr virus origin of plasmid replication, oriP, contains both the initiation and termination sites of DNA replication

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Eradication of Epstein-Barr virus by allogeneic bone marrow transplantation: implications for sites of viral latency

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Identification and characterization of oriLyt, a lytic origin of DNA replication of Epstein-Barr virus

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Epstein-Barr virus in nasal T-cell lymphomas in patients with lethal midline granuloma

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Induction of bcl-2 expression by Epstein-Barr virus latent membrane protein 1 protects infected B cells from programmed cell death

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Deviations from expected frequencies of CpG dinucleotides in herpesvirus DNAs may be diagnostic of differences in the states of their latent genomes

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Epstein-Barr virus small RNA (EBER) genes: unique transcription units that combine RNA polymerase II and III promoter elements

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Localization of Epstein-Barr virus-encoded small RNAs by in situ hybridization

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CpG methylation of the cAMP-responsive enhancer/promoter sequence TGACGTCA abolishes specific factor binding as well as transcriptional activation

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Gastric carcinoma: monoclonal epithelial malignant cells expressing Epstein-Barr virus latent infection protein

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In vitrotranscription of two Epstein-Barr virus specified small RNA molecules

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Co-localization of the retinoblastoma protein and the Epstein-Barr virus-encoded nuclear antigen EBNA-5.

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Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription

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Cells expressing the Epstein-Barr virus growth program are present in and restricted to the naive B-cell subset of healthy tonsils

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Expression of a family of complementary-strand transcripts in Epstein-Barr virus-infected cells

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DNA methylation affects the formation of active chromatin

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The activity of the Epstein-Barr virus BamHI W promoter in B cells is dependent on the binding of CREB/ATF factors

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Protein-protein interactions between Epstein-Barr virus nuclear antigen-LP and cellular gene products: binding of 70-kilodalton heat shock proteins

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Viral latency and transformation: the strategy of Epstein-Barr virus

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Two small RNAs encoded by Epstein-Barr virus and complexed with protein are precipitated by antibodies from patients with systemic lupus erythematosus

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The Epstein-Barr virus determined nuclear antigens EBNA-3A, -3B, and -3C repress EBNA-2-mediated transactivation of the viral terminal protein 1 gene promoter

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Methylation in the preinitiation domain suppresses gene transcription by an indirect mechanism

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The Epstein-Barr virus immortalizing protein EBNA-2 is targeted to DNA by a cellular enhancer-binding protein

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Transformation by the oncogenic latent membrane protein correlates with its rapid turnover, membrane localization, and cytoskeletal association

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Toward a comprehensive phylogeny for mammalian and avian herpesviruses

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An integral membrane protein (LMP2) blocks reactivation of Epstein-Barr virus from latency following surface immunoglobulin crosslinking

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Clonality, expression and methylation patterns of the Epstein-Barr virus genomes in lethal midline granulomas classified as peripheral angiocentric T cell lymphomas

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RNA polymerase III-transcribed EBER 1 and 2 transcription units are expressed and hypomethylated in the major Epstein-Barr virus-carrying cell types

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7 January 2021

Sequence-specific methylation inhibits the activity of the Epstein-Barr virus LMP 1 and BCR2 enhancer-promoter regions

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Host cell phenotype-dependent methylation patterns of Epstein--Barr virus DNA

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A novel form of Epstein-Barr virus latency in normal B cells in vivo

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7 January 2021

Site specific demethylation in the promoter of human gamma-globin gene does not alleviate methylation mediated suppression.

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Automated fluorescent genomic sequencing as applied to the methylation analysis of the human ornithine decarboxylase gene

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MBD2 is a transcriptional repressor belonging to the MeCP1 histone deacetylase complex

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Nucleoprotein complexes and DNA 5'-ends at oriP of Epstein-Barr virus

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Protein-DNA interaction and CpG methylation at rep*/vIL-10p of latent Epstein-Barr virus genomes in lymphoid cell lines

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Prevalence of epstein‐barr virus DNA in different T‐cell lymphoma entities in a European population

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Thymic carcinoma with a defective Epstein-Barr virus encoding the BZLF1 trans-activator

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Sequence-specific DNA binding of the Epstein-Barr virus nuclear antigen (EBNA-1) to clustered sites in the plasmid maintenance region

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Absence of an unusual "densely methylated island" at the hamster dhfr ori-beta

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Active mammalian replication origins are associated with a high-density cluster of mCpG dinucleotides

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DNA methylation, methyltransferases, and cancer

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Transcriptional activation of the Epstein-Barr virus latency C promoter after 5-azacytidine treatment: evidence that demethylation at a single CpG site is crucial.

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7 January 2021

Differences in B cell growth phenotype reflect novel patterns of Epstein-Barr virus latent gene expression in Burkitt's lymphoma cells

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7 January 2021

Epstein-Barr virus small RNAs potentiate tumorigenicity of Burkitt lymphoma cells independently of an effect on apoptosis

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De novo DNA methylation at nonrandom founder sites 5' from an unmethylated minimal origin of DNA replication in latent Epstein-Barr virus genomes

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7 January 2021

Protein-DNA binding and CpG methylation at nucleotide resolution of latency-associated promoters Qp, Cp, and LMP1p of Epstein-Barr virus

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Redefining the Epstein-Barr virus-encoded nuclear antigen EBNA-1 gene promoter and transcription initiation site in group I Burkitt lymphoma cell lines

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7 January 2021

Host-cell-determined methylation of specific Epstein-Barr virus promoters regulates the choice between distinct viral latency programs

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7 January 2021

Epstein-Barr virus LMP2A transforms epithelial cells, inhibits cell differentiation, and activates Akt.

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7 January 2021

Comparative analysis of the regulation of the interferon-inducible protein kinase PKR by Epstein-Barr virus RNAs EBER-1 and EBER-2 and adenovirus VAI RNA

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7 January 2021

Structure and coding content of CST (BART) family RNAs of Epstein-Barr virus

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The Epstein-Barr virus BARF1 gene encodes a novel, soluble colony-stimulating factor-1 receptor.

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7 January 2021

EBNA-5, an Epstein-Barr virus-encoded nuclear antigen, binds to the retinoblastoma and p53 proteins.

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7 January 2021

Analysis of methylation patterns in the regulatory region of the latent Epstein-Barr virus promoter BCR2 by automated fluorescent genomic sequencing

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7 January 2021

Epigenetics of latent Epstein-Barr virus genomes: high resolution methylation analysis of the bidirectional promoter region of latent membrane protein 1 and 2B genes

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7 January 2021

Relative deficiency in CpG dinucleotides is a widespread but not unique feature of Gammaherpesvirinae genomes.

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7 January 2021

Effects of DNA methylation on DNA-binding proteins and gene expression.

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7 January 2021

The Epstein-Barr virus promoter initiating B-cell transformation is activated by RFX proteins and the B-cell-specific activator protein BSAP/Pax5

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7 January 2021

Methylation of transcription factor binding sites in the Epstein-Barr virus latent cycle promoter Wp coincides with promoter down-regulation during virus-induced B-cell transformation

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7 January 2021

The Epstein-Barr virus (EBV) small RNA EBER1 binds and relocalizes ribosomal protein L22 in EBV-infected human B lymphocytes

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7 January 2021

Genomic sequencing reveals a 5-methylcytosine-free domain in active promoters and the spreading of preimposed methylation patterns

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7 January 2021

Identification of a Novel Promoter Located Within theBamHI Q Region of the Epstein-Barr Virus Genome for the EBNA 1 Gene

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7 January 2021

The "dark side" of chromatin remodeling: repressive effects on transcription

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7 January 2021

Epstein-Barr virus infection in salivary gland tumors in children and young adults

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7 January 2021

MspI, an isoschizomer of hpaII which cleaves both unmethylated and methylated hpaII sites

1 reference

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7 January 2021

Novel downstream elements upregulate transcription initiated from an Epstein-Barr virus latent promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Epstein-Barr virus nuclear antigen 2 specifically induces expression of the B-cell activation antigen CD23.

1 reference

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7 January 2021

An EBV membrane protein expressed in immortalized lymphocytes transforms established rodent cells.

1 reference

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7 January 2021

Cytosine methylation prevents binding to DNA of a HeLa cell transcription factor required for optimal expression of the adenovirus major late promoter

1 reference

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7 January 2021

Expression of the BNLF-1 oncogene of Epstein-Barr virus in the skin of transgenic mice induces hyperplasia and aberrant expression of keratin 6

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7 January 2021

Role for the Epstein-Barr virus nuclear antigen 2 in viral promoter switching during initial stages of infection

1 reference

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7 January 2021

Mutually exclusive use of viral promoters in Epstein-Barr virus latently infected lymphocytes

1 reference

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7 January 2021

Promoter switching in Epstein-Barr virus during the initial stages of infection of B lymphocytes

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7 January 2021

A re-examination of the Epstein-Barr virus carrier state in healthy seropositive individuals

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7 January 2021

A cis-acting element from the Epstein-Barr viral genome that permits stable replication of recombinant plasmids in latently infected cells

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Stable replication of plasmids derived from Epstein-Barr virus in various mammalian cells

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Epstein-Barr virus gene expression in nasopharyngeal carcinoma

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Relative levels of EBNA1 gene transcripts from the C/W, F and Q promoters in Epstein-Barr virus-transformed lymphoid cells in latent and lytic stages of infection

1 reference

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7 January 2021

Definition of the sequence requirements for binding of the EBNA-1 protein to its palindromic target sites in Epstein-Barr virus DNA

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https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Transcripts from the Epstein-Barr virus BamHI A fragment are detectable in all three forms of virus latency.

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https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Malaria, Epstein-Barr virus, and the genesis of lymphomas

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7 January 2021

Epstein-Barr virus nuclear protein LP stimulates EBNA-2 acidic domain-mediated transcriptional activation

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https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Methylation of discrete sites within the enhancer region regulates the activity of the Epstein-Barr virus BamHI W promoter in Burkitt lymphoma lines

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Rep*: a viral element that can partially replace the origin of plasmid DNA synthesis of Epstein-Barr virus.

1 reference

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7 January 2021

5-Azacytidine up regulates the expression of Epstein-Barr virus nuclear antigen 2 (EBNA-2) through EBNA-6 and latent membrane protein in the Burkitt's lymphoma line rael

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7 January 2021

Transcription start sites downstream of the Epstein-Barr virus (EBV) Fp promoter in early-passage Burkitt lymphoma cells define a fourth promoter for expression of the EBV EBNA-1 protein

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

oriP is essential for EBNA gene promoter activity in Epstein-Barr virus-immortalized lymphoblastoid cell lines.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Epstein-Barr virus nuclear protein 3C modulates transcription through interaction with the sequence-specific DNA-binding protein J kappa

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Mapping promoter regions that are hypersensitive to methylation-mediated inhibition of transcription: application of the methylation cassette assay to the Epstein-Barr virus major latency promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Three pathways of Epstein-Barr virus gene activation from EBNA1-positive latency in B lymphocytes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Structural analyses of the Epstein-Barr virus BamHI A transcripts

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Silencing of the Epstein-Barr virus latent membrane protein 1 gene by the Max-Mad1-mSin3A modulator of chromatin structure

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Epstein-Barr virus induction of recombinase-activating genes RAG1 and RAG2

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Epstein-Barr virus nuclear antigen 2 transactivates latent membrane protein LMP1.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

EB viral genomes in epithelial nasopharyngeal carcinoma cells

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

Epstein-Barr virus-derived plasmids replicate only once per cell cycle and are not amplified after entry into cells

1 reference

https://api.crossref.org/works/10.1016%2FS0065-230X%2803%2901004-2

7 January 2021

10.1016/S0065-230X(03)01004-2

Identifiers

DOI

1 reference

1 August 2017

1 reference