International Journal of Speleology
38 (1)
61-70
Bologna (Italy)
January 2009
Available online at www.ijs.speleo.it
International Journal of Speleology
Oficial Journal of Union Internationale de Spéléologie
Guanophilic fungi in three caves of southwestern Puerto Rico
Ángel M. Nieves-Rivera1, Carlos J. Santos-Flores2, Frank M. Dugan3 and
Thomas E. Miller4
Abstract:
Nieves-Rivera Á.M., Santos-Flores C.J., Dugan F.M. and Miller T.E. 2009. Guanophilic fungi in three caves of southwestern Puerto
Rico. International Journal of Speleology, 38 (1), 61-70. Bologna (Italy). ISSN 0392-6672.
Fifty species of guanophilic (bat guano-loving) fungi were isolated from ield-collected samples within three caves in southwestern
Puerto Rico; most were mitosporic fungi (23 species). The caves studied were Cueva La Tuna (Cabo Rojo), Cueva de Malano
(Sistema de Los Chorros, San Germán), and Cueva Viento (El Convento Cave-Spring System, Guayanilla-Peñuelas). The most
conspicuous fungus by far was the zygomycete Circinella umbellata (Mucorales). Circinella umbellata dominated the bat guano
incubation chambers (Petri dishes lined with sterile ilter paper moistened with sterile water) at ambient laboratory conditions.
Nineteen species of basidiomycetes (e.g., Ganoderma cf. resinaceum, Geastrum cf. minimum, Lepiota sp., Polyporus sp., Ramaria
sp.) and three species of ascomycetes (Hypoxylon sp., Xylaria anisopleura, and X. kegeliana) were also recorded. They were found
on soil, rotting leaves, bark and rotting wood, buried in bat guano located below natural skylights or sinkholes.
Keywords: coprophilous fungi, bat guano, biospeleology, West Indies, Caribbean
Received 16 June 2008; Revised 25 September 2008; Accepted 1 October 2008
INTRODUCTION
Bat guano or bat guano-enriched soil is one of
the most important substrates for fungi in the cave
environment along with dung, plant debris, carcasses
and other organic debris. Poulson (1972) reported that
bat guano habitat is simple in structure but with just
enough species to constitute a complete ecosystem.
The fungi present commonly serve as saprotrophs
and/or pathogens or as transient chemoheterotrophic
microorganisms (Northup et al., 1997). It is the fungal
biodiversity, its medical or biodegradation potential,
and its role as part of the trophic chain in cave
ecosystems that attract the attention of mycologists.
During the Spanish governance of Puerto Rico
no major efforts were made to study cave fungi,
although enormous efforts were devoted to guano
mining. In the late 19th century, British and American
1 U.S. Customs and Border Protection, Ofice of Field
Operations (Agriculture Specialists), John F. Kennedy
International Airport, Terminal 4, Jamaica, NY 11430,
anievesster@gmail.com
2 Department of Biology, University of Puerto Rico, P.O. Box
9012, Mayagüez, PR 00981-9012, charliejosesantos@yahoo.com
3 USDA-ARS, Western Regional Plant Introduction Station,
59 Johnson Hall, Washington State University, Pullman, WA
99164-6402, fdugan@wsu.edu
4 Department of Geology, University of Puerto Rico, P.O. Box
9017, Mayagüez, PR 00981-9017, tmiller@uprm.edu
expeditions led to the exploration of “Dark Cave” or
Cueva de Aguas Buenas (Aguas Buenas). Dinwiddie
(1899) reported what we suspect should be the earliest
mention of fungi in a Puerto Rican cave: “We are all
visibly disappointed in that the hanging stalactites
are covered with dirt or vegetal fungi of dark brown,
which makes the irst gallery a dungeon, even with
the laring lights.”
Early mycological studies in Puerto Rican caves
were focused on the distribution and ecology of the
histoplasmosis fungus –Histoplasma capsulatum–
which is found in soil and bat-roost caves. The irst
cases of human histoplasmosis in caves of Puerto
Rico were diagnosed in 1960 and 1962. TorresBlasini & Carrasco-Canales (1966a, b) reported H.
capsulatum from Cueva de los Panes (Utuado) and
Cueva de Aguas Buenas. This medically important
mycosis and its etiologic agent have been documented
from Cueva de Aguas Buenas for nearly two decades
(Torres-Blasini et al., 1960, 1966a, b; Beck et al.,
1976; Carvajal-Zamora, 1977a-c). The dermatophyte
Microsporum gypseum has been isolated from similar
habitats (Tamsitt & Valdivieso, 1970). In addition,
the works of Tamsitt & Valdivieso (1970), Stevenson
(1975), Magnaval et al. (1984), Nishida (1989), Lewis
(1989), Minter et al. (2001), and Ulloa et al. (2006)
summarized, commented on or listed the previous
mycological reports in caves of the island and the
Caribbean.
62
Ángel M. Nieves-Rivera, Carlos J. Santos-Flores, Frank M. Dugan and Thomas E. Miller
Díaz Martínez (1972) studied eight cases of pulmonary
histoplasmosis that were reported in young men who
together explored Cueva del Peñón del Barrio Rosario,
San Germán, southwestern Puerto Rico. Apparently,
this is one of the largest epidemics traced to a single
site reported from Puerto Rico.
Although Díaz
Martínez (1972 and personal communication, 2007)
sent soil samples to Luis A. Roure of the Department
of Biology, University of Puerto Rico in Mayagüez for
a mycological survey, H. capsulatum was not isolated.
Díaz Martínez based his study on cutaneous tests,
serological tests, and X-rays.
Nieves-Rivera & Betancourt-López (1994) isolated
the water molds Saprolegnia ferax and Achlya
americana from a stream pond known as Charco Azul
in El Convento Cave-Spring System of south-western
Puerto Rico. Lugo et al. (2001) summarized what
is known about the karst of Puerto Rico, including
the north and south karstic belts, especially their
importance, anthropogenic impact, ecology and
geology. However, this important contribution did
not comment on any mycological surveys previously
carried out in caves of the island.
Nieves-Rivera (2003) conducted a basic mycological
survey in the Río Camuy Caves Park and the Río
Camuy Cave System in the northern karst of Puerto
Rico. He found thirty-nine fungal species and eleven
cellular and plasmodial slime molds. Two of the
cellular slime molds (Dictyostelium citrinum and D.
macrocephalum) were new records for Puerto Rico.
Landolt et al. (2006) updated the information on
dictyostelid cellular slime molds found in caves in nine
states of the United States, San Salvador (Bahamas),
and Puerto Rico, during 1990 to 2005. Samples of soil
material from more than 100 caves were considered.
At least 17 species were recovered, although a number
of isolates could not be identiied conclusively. Four
cosmopolitan species (Dictyostelium sphaerocephalum,
D. mucoroides, D. giganteum, and Polysphondylium
violaceum), and a species (D. rosarium) with a more
restricted distribution were each recorded from more
than 25 different caves. Three other species were
present in more than 20 caves. The data generated
in this study were supplemented with all known
published and unpublished records of dictyostelids
from caves in an effort to summarize what is known
about their occurrence in this habitat.
More recently, Santos-Flores & Nieves-Rivera
(2008) and Nieves-Rivera et al. (2008) conducted a
preliminary survey of aquatic fungi and related groups
in El Convento Cave-Spring System and terrestrial
guanophilic fungi in caves of southwestern Puerto
Rico (the basis of the present study), respectively.
Richardson (2008) isolated 54 species of coprophilous
fungi from incubation, in damp chambers, of 21 samples
of dung from mammalian herbivores from Puerto Rico
and the Lesser Antilles (St. John [USVI], Guadeloupe
[France], Dominica and St. Lucia). Although he did not
sample caves, many of the species he reported are new
records for the region and might be obtained in future
samplings. Richardson also discussed the distribution
and occurrence of unusual or interesting species.
General data, distribution, evolution, and other
aspects regarding Puerto Rican speleobiota related
to guano ecology or the production of guano per se
have been treated by various authors. Refer to the
works of Peck (1974, 1981, 1994) for invertebrates
and Gannon et al. (2005) and Rodríguez-Durán
(2005) for bats. The works of Gile & Carrero (1918),
Wadsworth (1977), Cardona Bonet (1985), and Frank
(1998) covered aspects of guano production and its
repercussions in Puerto Rico and offshore islands.
The purpose of this paper is to present the results of
our survey and observations on guanophilic fungi and
guano-associated fungi in three caves of southwestern
Puerto Rico.
MATERIALS AND METHODS
Study Sites
Several authors have addressed the Puerto Rican
karst surface and its hydrology during past decades
(e.g., Monroe, 1976, 1980; Giusti, 1978; Lugo et al.,
2001). The southern karst of Puerto Rico differs from
that of the north in often being developed on much
older limestone rocks (Cretaceous versus Tertiary
age), its speleogenesis, and its drier climate (Miller,
2004; Figure 1). The climate of the southern part
of Puerto Rico is generally that of a subtropical dry
forest (dry forest-volcanic/sedimentary/limestone),
but the areas studied fall within the subtropical moist
forest (moist-volcanic/sedimentary) according to the
Holdridge model (Ewel & Whitmore, 1973; Helmer et
al., 2002). The caves studied are described below (see
Figure 1).
Cueva La Tuna (also known as Cueva de la Veintidós,
Cueva del Maestro Aniceto or Cueva El Maestro,
Figure 2) is a hydrologically inactive cave, located in
the resistant Late Cretaceous Cotuí Limestone in the
Cabo Rojo municipality. It is near the top (about 200 m
asl) of a hill in the Monte Grande area, approximately
3.5 km SE of Cabo Rojo, and is within a karst area of
caves and a major doline. This cave has about a half
kilometer of large passage (8-20 m wide), generally
steeply-inclined (total relief about 50 m). The cave
has primarily developed down a NE structural dip,
but with a signiicant section along the strike. Much
of the loor is dominated by ceiling collapse. Large
wall scallops show very slow groundwater dissolved
the cave, in hydrologic conditions very different from
today. Currently, only iniltrating rainfall enters the
cave. Like most large caves in Puerto Rico, it appears
to show more than one hydrologic base level in the
past. Peck (1981) described the cave as having a
chamber with a temperature of 25.5°C at the base of
the entrance slope. This ascends to a high ceiling bat
chamber. An Artibeus jamaicensis bat nursery with
temperatures of 29°C and higher is in a side passage
near the cave front. Peck (1981) also documented the
invertebrate fauna of this cave.
Cueva de Malano (Figure 3) (also known as Cueva
de Los Santos or Cueva de Los Braceros) is another
hydrologically inactive cave, part of Sistema de Los
Chorros of the San Germán municipality (Miller,
2004). This cave system is one of the largest in
International Journal of Speleology, 38(1), 61-70 Bologna (Italy). January 2009
Guanophilic fungi in three caves of southwestern Puerto Rico
63
Fig. 1. Puerto Rico and the locations of the three caves discussed in this study (the stars). Gray areas outline the major karsts of the island (after
Lugo et al., 2001).
Fig. 2. Cueva La Tuna, approximately 200 m asl The three sample sites are indicated by the stars. The interior detail uses standard symbols for
cave features.
the area with 815 m surveyed. The Sistema de Los
Chorros developed at 100-120 m asl in a resistant ridge
forming, fault-bounded segment of the Cretaceous
Cotuí Limestone (Volckmann, 1984; Miller, 2004).
The presence of seeds and etiolated seedlings of
Andira inermis is notable in several portions of this
cave; they were probably carried out into the cave as
seeds by bats. These seeds become an ideal substrate
for microorganisms, such as fungi.
Like the other two, Cueva Viento (Figure 4) is a
hydrological-relict level, lying at least 30 m above
the active cave system known as El Convento CaveSpring System. This cave system is located in the
middle of the Tertiary Juana Díaz Formation at the
head of a deep, vertically-walled karst gorge known
as Quebrada Los Cedros (approximately 5 km
ENE of Guayanilla), which is a tributary of the Río
Macaná. The underground sections of the stream,
International Journal of Speleology, 38(1), 61-70 Bologna (Italy). January 2009
64
Ángel M. Nieves-Rivera, Carlos J. Santos-Flores, Frank M. Dugan and Thomas E. Miller
Fig. 3. Cueva de Malano, 100-120 m a.s.l. This is the largest of three sections of Sistema Los Chorros; Cueva de Las Chimeneas is located 15 m
vertically above Malano. The stars indicate the three sample sites. From Miller, 2004.
cave, and upper level dry cave (Cueva Viento) can
be explored for a distance of approximately 500 m
(Beck, 1974). It is located in the eastern wall of the
Quebrada Los Cedros gorge, approximately 60 m
south of the canyon headwall, and is reached via a
steep talus slope. Cueva Viento rises almost 40 m in
a 20 m wide tunnel, to a large dome, approximately
20 m tall with two skylights (Beck, 1974). A wide
excavation about 7 m deep remains from past guano
mining. The accumulations of fresh guano indicate
a large bat population, especially among the species
A. jamaicensis and Brachyphylla cavernarum,
inhabitants of this cave system (Nicholas, 1974). The
works of Nicholas (1974) and Peck (1981) documented
the vertebrate and invertebrate fauna of this cave
system. Cintrón & Beck (1977) have shown how the
differing microclimate of this karst gorge has isolated
a plant community otherwise typical of subtropical
moist forest , within the local dry life zones nearby.
Fig. 4. Cueva Viento (lower igure) 120 m asl; and location relative to
other caves in El Convento Cave-Spring System network, after Beck
(1974), and Miller (present study). The stars indicate the three sample
sites.
Collection and Examination of Samples
For determination of dominant mycobiota, samples
of bat guano were placed in glass Petri dishes on ilter
paper moistened with sterile water and incubated
under ambient laboratory conditions until sporulation
of fungi was observed under a magniication of 50x
(Richardson, 2008). Structures of the predominant
fungi were examined at 100-400x. Pieces of wood
International Journal of Speleology, 38(1), 61-70 Bologna (Italy). January 2009
Guanophilic fungi in three caves of southwestern Puerto Rico
associated with bat guano were also collected. Other
fungi were isolated from ield-collected samples and
processed according to Nieves-Rivera (2003), using
Potato Dextrose Agar acidiied with 10% lactic acid
and Rose Bengal Agar as fungal growth media.
Wet mount observations were made with a Nikon
Labophoto-2 microscope. All specimens were identiied
by observation of morphological and microscopic
characters, along with comparison with specimens
from the U.S. National Fungus Collection at Maryland
(BPI). Identiication of the species of Circinella was
done according to the scheme of Hesseltine & Fennell
(1955) and Zycha et al. (1969).
Other taxonomic
keys consulted were those of Bell (1983), Seifert et
al. (1983), Ellis & Ellis (1988), Richardson & Watling
(1997), and Doveri (2004).
RESULTS AND DISCUSSION
Fifty species of guanophilic fungi were isolated from
ield-collected samples within the caves sampled;
most were mitosporic fungi (23 species) (Table 1;
Figures 5A-F, 6, 7A-B, and 8). The most conspicuous
fungus by far was the zygomycete Circinella umbellata
(Mucorales).
Circinella umbellata dominated the
bat guano incubation chambers. Nineteen species
of basidiomycetes (e.g., Ganoderma cf. resinaceum,
Geastrum cf. minimum, Lepiota sp., Polyporus sp.,
Ramaria sp.) and three species of ascomycetes
(Hypoxylon sp., Xylaria anisopleura, and X. kegeliana)
were also recorded. They were found on soil, rotting
leaves, bark and rotting wood, buried in bat guano
located below natural skylights or sinkholes (Table 1;
Figures 5B-D). Xylaria anisopleura and X. kegeliana
have been previously collected from rotten wood in The
Ravine of the Río Camuy Caves Park (Nieves-Rivera,
unpublished data, 1999).
Circinella umbellata is a coprophilous species often
recorded from dung of various animals. Zycha et al.
(1969) and O’Donnell (1979) provided illustrations
and multiple references on this species. Isolates of
C. umbellata from dog dung, rat dung, lizard dung,
and various other types of dung are available from
Table 1. Guanophilic fungi collected in three caves of southwestern Puerto Rico.
Mitosporic fungi
Aspergillus lavus Link
A. fumigatus Fresenius
A. nidulans (Eidam) G. Winter
A. niger van Tieghem
Cladosporium cladosporoides (Fresenius) deVries
C. sphaerospermum Penzig
Basidiomycota
Auricularia fuscosuccinea (Mont.) Farl.*
A. polytricha (Mont.) Farl.*
Clitocybe sp.*
Collybia aurea (Beeli) Pegler*
C. johnstoni (Murrill) Dennis*
Ganoderma cf. resinaceum Boud.*
C. oxysporum Berk. & M. A. Curtis
Geastrum cf. minimum Schw.*
Curvularia cf. eragrostidis (P. Hennings Mayer)
Hexagonia hydnoides (Sw.) M. Fidalgo*
Fusarium oxysporum Schl.
Lepiota sp.*
F. solani (Martius) Sacc.
Lepista cf.*
Geotrichum sp.
Mycena sp.*
Gliocladium sp.
Phellinus gilvus (Schw.) Pat.*
Hirsutella sp.
Podoscypha sp.*
Neurospora sp.
Lepiota sp.*
Paecilomyces sp.
Polyporus sp.*
Penicillium chrysogenum Thom
P. lilacinum Thom
Rigidoporus microporus (Fr.) Overeem.*
P. roqueforti Thom
Ramaria sp.*
Scopulariopsis sp.
Trametes sp.*
Sepedonium cf.
Volvariella sp.*
Trichoderma viridae Pers.: Fr.
Trichoderma sp.
Zygomycota
Mycelia sterilia
Ascomycota
Hypoxylon sp.*
65
Absidia cf.
Circinella umbellata van Tieghem & Le Monnier
Cunninghamella sp.
Xylaria anisopleura (Mont.) Fr.*
Mucor sp.
X. kegeliana (Lév.) Fr.*
Rhizopus cf. stolonifer (Erh.: Fr.) Vuill.
* Not coprophilous or guanophilic fungi. Their presence in guano is incidental, because these fungi are saprotrophs (lignicolous, foliicolous) or
edaphic, thus we prefer to use the term “guano-associated fungi” for these species.
International Journal of Speleology, 38(1), 61-70 Bologna (Italy). January 2009
66
Ángel M. Nieves-Rivera, Carlos J. Santos-Flores, Frank M. Dugan and Thomas E. Miller
Fig. 5. A-F. Fungi from caves. A. Entrance to Cueva La Tuna. B. Hypoxylon sp. on wood. C. Xylaria anisopleura on wood. D. Xylaria kegeliana
on wood. E. Aspergillus nidulans on the seed of the Angelin or “Moca” tree (Andira inermis) probably brought by roosting bats into the cave (Cueva
La Tuna). F. Mycelia sterilia on a fecal pellet on bat guano (Cueva de Malano).
International Journal of Speleology, 38(1), 61-70 Bologna (Italy). January 2009
Guanophilic fungi in three caves of southwestern Puerto Rico
67
Fig. 6. Mycelia sterilia on bat guano in Cueva La Catedral (Río
Camuy Caves Park, Hatillo, northern Puerto Rico (Nieves-Rivera,
2003).
Fig. 8. Mycelia sterilia on bat guano in Cueva de Malano. The seeds
and etiolated seedlings of Andira inermis are notable in several
portions of this cave. Photograph was taken by one of us (ÁMNR)
during an early exploration on 20 October 1989.
Fig. 7. A-B. Mycelia sterilia on stalagmite (A) and fecal pellet on bat
guano (B) in Cueva de Malano.
commercial culture collections. We did not observe the
sexual stage. Also, C. umbellata has been isolated from
soil and bat guano of Cueva Las Archillas (Morovis),
Cueva La Catedral (Río Camuy Caves Park, Hatillo),
Cueva Mata de Plátano or Cueva Los Culebrones
(Arecibo), Cueva Matos (Arecibo), and Cueva El
Peñón del Rosario (San Germán). Circinella umbellata
dominated the fungi in the incubation chambers, but
it may not have been the most conspicuous fungus in
the cave habitats.
In the present study we did not isolate the fungus
H. capsulatum. The media (mold inhibitory media not
being used) and the methods used for isolation of fungi
(no use of mouse-passage technique often employed
for recovery of this fungus from samples of bat guano)
could account for its non-recovery. One of us (ÁMNR)
observed conidia similar to H. capsulatum in bat guano
in previous surveys but smaller than typical for H.
capsulatum. The maximum dimension was less than
8 µm, most were between 6-7 µm and there were many
smaller ones. Gaur & Lichtwardt (1980), indicated
that they screened for conidia of 8-11µm in diameter,
when looking for H. capsulatum. An examination of
tubercles on conidia obtained in the caves of Puerto
Rico showed differences in variability in shape and
width in these structures from those of H. capsulatum
isolates produced in agar culture (L. Sigler, personal
communication, 1997). Sigler et al. (1979) and Gaur &
Lichtwardt (1980) have demonstrated that similar soil
saprobic fungi such as the Botryotrichum anamorph
of Chaetomium histoplasmoides, Chrysosporium
anamorph of Renispora lavissima, Myceliophthora
anamorph of Corynascus sepedonium, and Sepedonium
produce structures which resemble the tuberculated
macroconidia and microconidia of H. capsulatum,
International Journal of Speleology, 38(1), 61-70 Bologna (Italy). January 2009
68
Ángel M. Nieves-Rivera, Carlos J. Santos-Flores, Frank M. Dugan and Thomas E. Miller
making visual identiication dificult. Each of these
species forms conidia which are generally larger than
those of the specimen from Puerto Rico. Isolation of
the fungus producing these conidia was unsuccessful
(Nieves-Rivera, unpublished data, 1999).
During our expeditions, we have documented six
different forms of Mycelia sterilia on fecal pellets and
bat guano in the caves of Puerto Rico: (1) dendritic or
dendroid (like the mycelium of Collybia johnstoni on leaf
litter) (Figure 5F), (2) acicular to subulate forming the
“spiky” or star-like (Figures 6, 7B), (3) iliform (Figure
7A), (4) cottony (Figure 8), (5) foliose (like the mycelium
of Marasmius spp. on leaf litter), and (6) combination of
two or more forms. In Figures 5F, 6, 7A-B, and 8, we
showed four of the six different forms of M. sterilia. The
forms of M. sterilia illustrated include a hyaline “spiky”
or star-like, acicular to subulate, iliform with tapered
base, mostly straight, having a dehiscent appearance,
about 1 to 6 cm in diameter, sometimes larger. Since
no fruiting structures or spores have been detected, we
tentatively named them M. sterilia. In Cueva de Malano,
M. sterilia was incidentally found on a moist calcite
stalagmite (Figure 7A), but mostly on the ground and
under a bat roost (Figure 7B). Fungi have been isolated
from the surface water ilm of limestone and calcite
speleothems elsewhere (Hasselbring et al., 1975).
It has been suggested that many of the fungallike structures that have been identiied as M.
sterilia in this study are actually aragonite helictites.
Aragonite helictites are specialized speleothems in
limestone caves that occur as a result of seepage
through a central pore (0.2-0.4 mm in diameter) and
deposition at the tip, forming eccentrics that defy
gravity. Although M. sterilia might resemble aragonite
helictites (see lower illustration of page 57 in Moore
& Sullivan, 1978), a closer examination might reveal
their fungal origin. There are certain differences to
be noticed; for instance, there is no central pore, they
are composed of mycelium (mostly coenocitic but
sometimes septate), and they occur in association
with fecal pellets, guano, seeds, and fruits.
Basidiomycetes were also found on various
substrates (on soil, rotting leaves, bark and rotting
wood buried in bat guano located below natural
skylights or sinkholes and through the gorge of the
El Convento Spring-Cave System during the course
of our expeditions (Table 1). These basidiomycetes
occurred at the entrance of caves or throughout the
gorge per se. Most of these species are new records for
this karstic isolated zone, however they are commonly
found in the forests of Puerto Rico (Lodge, 1996;
Minter et al., 2001; Cantrell et al., 2006; Cantrell &
Lodge, 2008).
Fungal species collected from the sites considered
in the present survey were similar to those found
in previous surveys (Carvajal-Zamora & NievesRivera, 1998; Nieves-Rivera & Carvajal-Zamora,
2000; Nieves-Rivera, 2003; Pedro & Bononi, 2007).
Many of the species collected are common saprobes
of soil, dung, and plant debris. In deep caves, the
long isolation from the surface input may cause food
deprivation, starvation or low nutrient for the fungal
population. However, bat guano is a rich substrate,
which combined with high humidity along with stable
temperatures through the year, provides optimal
environmental conditions (a natural Petri dish), ideal
for fungal development.
The importance of studying cave fungi relates to
the fact that many species have the ability to produce
mycotoxins that repel microorganisms (e.g., bacteria,
protists, nematodes). Fungi also recycle the nutrients
in the caves; therefore they constitute a crucial link to
the trophic chain. The possibility of novel discoveries
is not exhausted and, as suggested in Lodge (1996), it
would be a monumental task to produce a reasonably
complete mycobiota for Puerto Rico. Therefore, it
seems important to continue studying such habitats,
in order to contribute to the conservation and
knowledge of the speleo-biodiversity of Puerto Rico.
ACKNOWLEDGEMENTS
We would like to dedicate this work to the
memory of the Nicaraguan biospeleologist and
mycologist Juan Ramón Carvajal-Zamora (19442006), who in September 2006 passed away
at the age of 61, after a fruitful life of research
and being one of the founding fathers of Puerto
Rican biospeleology and limnology. In addition,
we thank María Ruiz-Yantín (Dept. of Earth and
Environmental Sciences, Vanderbilt University,
Nashville) for her help to this study. Thanks
to Lynne Sigler (Microfungus Collection and
Herbarium, University of Alberta, Edmonton,
Canada), Barry F. Beck (P.E. LaMoreaux &
Associates, Inc., Oak Ridge), Stewart B. Peck (Dept.
of Biology, Carleton University, Ottawa, Canada),
and Steven L. Stephenson (Dept. of Biological
Sciences, University of Arkansas, Fayetteville) for
their comments or review of the manuscript. We
thank Jack D. Rogers (Dept. of Plant Pathology,
Washington State University, Pullman) for the
identification of the Xylaria species. Figures 5A-F
was prepared by Peter Rocafort (Dept. of Marine
Sciences, University of Puerto Rico, Mayagüez) and
Figure 6 was kindly provided by Luis E. Collazo
(Dept. of Crop Protection, University of Puerto
Rico, Mayagüez).
REFERENCES
Beck B.F., 1974 - Geology and hydrology of the El
Convento Cave-Spring System, southwestern Puerto Rico.
International Journal of Speleology, 6: 93-107.
Beck B.F., Fram M. & Carvajal-Zamora J.R., 1976 - The
Aguas Buenas Caves, Puerto Rico: Geology, hydrology
and ecology with special referenc e to the histoplasmosis
fungus. National Speleological Society Bulletin 38: 1-16.
Bell A., 1983 - Dung fungi: An illustrated guide to coprophilous
fungi found in New Zealand. Victoria University Press,
Wellington. 88 pp.
Cantrell S.A. & Lodge D.J., 2008 – Capítulo 4: Hongos. In:
Joglar R.L. (Ed.) – Biodiversidad de Puerto Rico: Agustín
Stahl, Flora, Hongos. Serie de Historia Natural, pp. 247295. La Editorial, Universidad de Puerto Rico, San Juan,
Puerto Rico.
International Journal of Speleology, 38(1), 61-70 Bologna (Italy). January 2009
Guanophilic fungi in three caves of southwestern Puerto Rico
Cantrell S.A., Lodge D.J., Minter D.W. & Ortiz Santana
B., 2006 - Fungi of Puerto Rico. www.cybertrufle.org.
uk/puerfung (Accessed from World Wide Web on 29
September 2008).
Cardona Bonet W., 1985 - Islotes de Borinquen (Amoná,
Abey, Piñas, Sikeo y otros). Notas para su historia.
Model Offset Printing, San Juan, Puerto Rico. 127
pp.
Carvajal-Zamora J.R., 1977a - Isolation of Histoplasma
capsulatum from soil in the Aguas Buenas Caves,
Aguas Buenas, Puerto Rico. I. An ecological approach.
Mycopathologia, 60: 157-161.
Carvajal-Zamora J.R., 1977b - Isolation of Histoplasma
capsulatum from air in the Aguas Buenas Caves, Aguas
Buenas, Puerto Rico. Mycopathologia, 60: 163-165.
Carvajal-Zamora J.R., 1977c - Isolation of Histoplasma
capsulatum from tissues of bats captured in the
Aguas Buenas Caves, Aguas Buenas, Puerto Rico.
Mycopathologia, 60: 167-169.
Carvajal-Zamora J.R. & Nieves-Rivera Á.M., 1998 Preliminary checklist of cave mycobiota of Puerto
Rico with special reference to bat-guano enriched
soil hyphomycetes. Mycological Society of America/
American Bryological and Lichenological Society 1998
Annual Meeting, San Juan, Puerto Rico. Abstract in
Inoculum, 49: 13.
Cintrón B. & Beck B.F., 1977 - Isolation of plant
community by karst processes in southwestern Puerto
Rico. National Speleological Society Bulletin, 39: 7379.
Díaz Martínez R., 1972 - Histoplasmosis aguda—
Epidemia en San Germán. Boletín de la Asociación
Médica de Puerto Rico, 64: 291-294.
Dinwiddie W., 1899 - Puerto Rico: Its conditions and
possibilities (second edition, 2005). Harper & Brothers
Publishers, New York and London. 294 pp.
Doveri F., 2004 - Fungi imicoli italici: A guide to the
recognition of basidiomycetes and ascomycetes living
in fecal material. Associazione Micologica Bresedola,
Fondazione Centro Studi Micologici dell’A.M.B.,
Vicenzia, Italy. 1104 pp.
Ellis M.B. & Ellis J.P., 1988 - Microfungi on miscellaneous
substrates: An identiication handbook. Timber Press,
Portland, Oregon. 246 pp.
Ewel J.J. & Whitmore J.L., 1973 – The ecological life
zones of Puerto Rico and the U.S. Virgin Islands. Forest
Service Research Paper ITF, 18. U.S. Department
of Agriculture Forest Service, Institute of Tropical
Forestry, Río Piedras, Puerto Rico. 72 pp., 1 map.
Frank E.F., 1998 - History of the guano mining industry,
Isla de Mona, Puerto Rico. Journal of Cave and Karst
Studies, 60: 121-125.
Gannon M.R., Kurta A., Rodríguez-Durán A. & Willig
M.R., 2005 - Bats of Puerto Rico: An island focus and
a Caribbean perspective. Texas Tech University Press,
Lubbock, Texas. 239 pp.
Gaur P.K. & Lichtwardt R.W., 1980 – Preliminary visual
screening of soil samples for the presumptive presence
of Histoplasma capsulatum. Mycologia, 72: 259-269.
Gile P.L. & Carrero J.O., 1918 - The bat guanos of Porto
Rico and their fertilizing value. Porto Rico Agriculture
Experiment Station, 25: 1-66.
69
Giusti E.V., 1978 - Hydrogeology of the karst of Puerto Rico.
U.S. Department of the Interior, U.S. Geological Survey,
Washington, D.C. U.S. Geological Survey Professional
Paper, 1012: 1-68.
Hasselbring T.S., Tansey M.R. & Jack M.A. 1975 - Fungi
associated with growing stalagmites. Mycologia, 67: 171172.
Helmer E.H., Ramos O., López T. del M., Quiñones M. & Díaz
W., 2002 - Mapping the forest type and land cover of Puerto
Rico, a component of the Caribbean biodiversity hotspot.
Caribbean Journal of Science, 38: 165-183.
Hesseltine C.W. & Fennell D.I., 1955 - The genus Circinella.
Mycologia, 47: 193-212.
Landolt J.C., Stephenson S.L. & Slay M.E., 2006 - Dictyostelid
cellular slime molds from caves. Journal of Cave and Karst
Studies, 68:22-26.
Lewis W.C., 1989 - Histoplasmosis, a hazard to new tropical
cavers. National Speleological Society Bulletin, 51: 52-65.
Lodge D.J., 1996 - Microorganisms. In: Reagan D.P. & Waide
R.B. (Eds.) - The food web of a tropical rain forest, pp. 53108. University of Chicago Press, Chicago.
Lugo A.E., Miranda-Castro L., Vale A., del Mar-López T.,
Hernández-Prieto E., García-Martinó A., Puente-Rolón
A.R., Tossas A.G., McFarlane D.A., Miller T., Rodríguez
A., Lundberg J., Thomlinson J., Colón J., Schellekens J.,
Ramos O. & Helmer E., 2001 - Puerto Rican karst—A vital
resource. USDA Forest Service General Technical Report,
WO-65: 1-100.
Magnaval J.F., Blanc C. & Therizol M., 1984 - Histoplasmosis
and bats in Martinique (French West Indies). Caribbean
Journal Science, 20: 109-112.
Miller T.E., 2004 - Structural control on cave development
in Cretaceous limestone, southern Puerto Rico. Caribbean
Journal of Science, 40: 276-280.
Minter D.W., Rodríguez Hernández M. & Mena Portales J.,
2001 - Fungi of the Caribbean: An annotated checklist.
PDMS Publishing, United Kingdom. 946 pp.
Monroe W.H., 1976 - The karst landforms of Puerto Rico.
U.S. Department of the Interior, U.S. Geological Survey,
Washington, D.C. U.S. Geological Survey Professional
Paper, 899: 1-69.
Monroe W.H., 1980 - Geology of the Middle Tertiary
formations of Puerto Rico. U.S. Department of the Interior,
U.S. Geological Survey, Washington, D.C. U.S. Geological
Survey Professional Paper, 953: 1-93.
Moore W.G. & Nicholas Sullivan G., 1978 - Speleology: The
study of caves, revised second edition. Cave Books, St.
Louis, Missouri. 150 pp.
Nicholas B.G., 1974 - Biology and ecology of the El Convento
Cave-Spring System (Puerto Rico). International Journal of
Speleology, 6:109-114.
Nieves-Rivera Á.M., 2003 - Mycological survey of Río Camuy
Caves Park, Puerto Rico. Journal of Cave and Karst Studies,
65: 23-29.
Nieves-Rivera Á.M. & Betancourt-López C., 1994 - Saprolegnia
ferax (Gruith.) Thuret (Oomycetes), new record for Puerto
Rico. Caribbean Journal of Science, 30: 288-290.
Nieves-Rivera Á.M. & Carvajal-Zamora J.R., 2000 Cave mycobiota of Puerto Rico with special reference
to those inhabiting bat-guano enriched soil. Memorias
XIX Simposio Flora y Fauna del Caribe, Universidad de
Puerto Rico, Humacao, Puerto Rico. Abstract, p. 17.
International Journal of Speleology, 38(1), 61-70 Bologna (Italy). January 2009
70
Ángel M. Nieves-Rivera, Carlos J. Santos-Flores, Frank M. Dugan and Thomas E. Miller
Nieves-Rivera Á.M., Santos-Flores C.J. & Dugan F.M.,
2008 - Preliminary survey of guanophilic fungi in three
caves of southwestern Puerto Rico. Focus, 4: 164.
Nishida F.H., 1989 - Review of mycological studies in the
neotropics. In: Campbell D. & Hammond D.H. (Eds.)
- Floristic inventory of tropical countries, pp. 494-522.
The New York Botanical Garden, New York.
Northup D.E., Lavoie K. & Mallory L., 1997 - Microbes in
caves. National Speleological Society News 55:11.
O’Donnell K.L., 1979 - Zygomycetes in culture. Department
of Botany, University of Georgia, Athens, Georgia.
257 pp.
Peck S.B., 1974 - The invertebrate fauna of tropical
American caves, part II. Puerto Rico, an ecological and
zoogeographic analysis. Biotropica, 6: 14-31.
Peck S.B., 1981 - Zoogeography of invertebrate cave faunas
in southwestern Puerto Rico. National Speleological
Society Bulletin, 43: 70-79.
Peck S.B., 1994 - A synopsis of the invertebrate cave
fauna of Puerto Rico, Mona Island and the Virgin Islands.
In: Juberthie C. & Dean V. (Eds.) - Encyclopaedia
Biospeologica, pp. 505-512, Vol. 43. Moulis-Bucarest,
Romania.
Pedro E.G. & Bononi V.L.R., 2007 - Cave fungi of the
karst region of the State Touristic Park of the Upper
Ribeira Valley (Petar) in the State of Sao Paulo in Brazil.
Focus, 5: 65-78.
Poulson T.L., 1972 - Bat guano ecosystems. Bulletin of
the National Speleological Society, 72: 55-59.
Richardson M.J. 2008 - Records of coprophilous fungi
from the Lesser Antilles and Puerto Rico. Caribbean
Journal of Science, 44: 206-214.
Richardson M.J. & Watling R., 1997 - Keys to fungi on
dung. British Mycological Society, Stourbridge, United
Kingdom. 68 pp.
Rodríguez-Durán A., 2005 - Capítulo 4: Murciélagos.
In: Joglar R. (Ed.) - Biodiversidad de Puerto Rico:
Vertebrados terrestres y ecosistemas. Serie de
Historia Natural, pp. 241-274. Instituto de Cultura
Puertorriqueña, San Juan, Puerto Rico.
Santos-Flores C.J. & Nieves-Rivera Á.M., 2008 - Mycological
observations from subterranean and exposed portions of
a subterranean stream. Focus, 4:130.
Seifert K.A., Kendrick B. & Murase G., 1983 - A key to
hyphomycetes on dung. University of Waterloo Biology
Series, 27: 1-62.
Sigler L., Gaur P.K., Lichtwardt R.W. & Carmichael J.W.,
1979 – Renispora lavissima, a new gymnoascaceous
fungus with tuberculate Chrysosporium conidia.
Mycotaxon, 10: 133-141.
Stevenson J.A., 1975 - Fungi of Puerto Rico and the
American Virgin Islands. Braun-Brumield, Inc. Ann
Arbor, Michigan. 743 pp.
Tamsitt J.R. & Valdivieso D., 1970 - Los murciélagos y la
salud pública— Estudio con especial referencia a Puerto
Rico. Boletín de la Oicina Sanitaria Panamericana, 69:
122-140.
Torres-Blasini G. & Carrasco-Canales J.A., 1966a - A
human pathogenic fungus recovered from soil for the irst
time in Puerto Rico. Mycopathologia, 28: 329-332.
Torres-Blasini G. & Carrasco-Canales J.A., 1966b - Soil
studies in Puerto Rico. Mycopathologia et Mycologia
Applicata, 29: 177-181.
Torres-Blasini G., Figueras E.R. & Sifontes J.E., 1960 Histoplasmosis in Puerto Rico. Boletín de la Asociación
Médica de Puerto Rico, 52: 136-142.
Ulloa M., Lappe P., Aguilar S., Park H., Pérez-Mejía A.,
Toriello C. & Taylor M.L., 2006 - Contribution to the
study of the mycobiota present in the natural habitats
of Histoplasma capsulatum: An integrative study in
Guerrero, Mexico. Revista Mexicana de Biodiversidad,
77: 153-160.
Volckmann R.P., 1984 - Geologic map of the San Germán
quadrangle, southwest Puerto Rico. U.S. Geological
Survey, Miscellaneous Investigations Series Map I-1558,
scale 1:20000.
Wadsworth F.H., 1977 - Reseña histórica de la Isla de
Mona. Revista/Review Interamericana, 6: 587-621.
Zycha H., Siepmann R. & Linnemann G., 1969 - Mucorales.
J. Cramer, Lehre. 355 pp.
International Journal of Speleology, 38(1), 61-70 Bologna (Italy). January 2009