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Accepted Manuscript: RSC - Li/pccp
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Volume 18 Number 1 7 January 2016 Pages 1–636 This is an Accepted Manuscript, which has been through the
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experimental investigations
Fang-Ling Yang, Xing Yang, Rui-Zhi Wu, Chao-Xian Yan, Fan Yang, Weichun Ye, Liang-Wei Zhang,
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State Key Laboratory of Applied Organic Chemistry, Key Laboratory of Nonferrous Metal Chemistry
and Resources Utilization of Gansu Province, College of Chemistry and Chemical Engineering,
*
Lanzhou University, 222 South Tianshui Road, 730000, Lanzhou, P. R. China. E-mail:
zhoupp@lzu.edu.cn
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Abstract
electron-rich atom or group like pyridine which possesses electron lone-pair N atom and π
ring. Theoretical studies of intermolecular interactions between C6F5Br and C5H5N have been
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carried out at the M06-2X/aug-cc-pVDZ level without and with counterpoise method,
potentials make these sites favorably interact with the N atom and π ring of C5H5N with
negative electrostatic potentials, leading to five different dimers connected by σ-hole···n bond,
σ-hole···π bond or π-hole···π bond. Their geometrical structures, characteristics, nature and
spectroscopy behaviors were systematically investigated. EDA analyses reveal that the
driving forces in these dimers are different. NCI, QTAIM and NBO analyses confirm the
existence of intermolecular interactions formed via σ- and π-holes of C6F5Br and N atom and
π ring of C5H5N. The experimental IR and Raman spectra gave us important information
about the formation of molecular complexes between C6F5Br and C5H5N. We expect the
results could provide valuable insight into the investigations of intermolecular interactions
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1. Introduction
serve as electron donor for forming hydrogen bond3-9 or as electron acceptor for
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on the outermost portion of the halogen's surface, the so-called σ-hole,1, 2, 9, 21-33 which
system with strongly electron-withdrawing substituents can also have a positive MSEP
region, the so-called π-hole,22, 23, 26, 27, 33-40 which may act as an electron acceptor.
σ- and π-holes because its Br atom can serve as halogen-bonding donor (i.e., σ-hole)41,
42
while its aromatic π ring can serve as an π-hole bonding donor (i.e., π-hole).20, 33, 37-39
atom, so its N atom and the aromatic π system are good electron donors. In view of
these features, it can be expected that C6F5Br could interact with C5H5N via various
modes. Structurally, the Br atom of C6F5Br can interact with the N atom or the
while the π-hole of C6F5Br can interact with the aromatic π system of C5H5N with π···π
interaction. Therefore, in this work, the possible interaction modes between C6F5Br
and C5H5N were taken into account, and their binding structures, spectroscopic and
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natures were systematically investigated. At the same time, the experimental IR and
The geometry structures of the monomers (C6F5Br, C5H5N) and complexes were optimized
using the M06-2X functional43, 44 with the aug-cc-pVDZ45 basis set. The counterpoise (CP)
method proposed by Boys and Bernardi46 was employed to take the basis set superposition
error (BSSE) correction into account. Harmonic vibrational frequency analysis was carried
out to ensure that the optimized structures were true minima without imaginary frequencies
on the potential energy surface. The interaction energy (∆Eint) is the energy difference between
the total energy of the complex and the sum of total energies of its constituent molecules. The
counterpoise interaction energy (∆Eint,CP) is the interaction energy (∆Eint) corrected by the
BSSE content of the interaction energy (δBSSE). Single point calculations at the
were also performed. All the calculations in the work were implemented by using the
The molecular surface electrostatic potential (MSEP) was used to analyze the molecular
electronic property, which can be as a powerful tool to understand the formation of the
complex.31, 51-55 The energy decomposition analysis (EDA) method developed by Su and Li56
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was used to analyze the physically meaningful components of total interaction energy which
consists of electrostatic (Eelst), exchange (Eexch), repulsion (Erep), polarization (Epol) and
of the attractive Coulomb interactions between the nuclei and electrons of the component
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monomers, the repulsive Coulomb interactions between the nuclei as well as between the
electrons of the component monomers, describing the Coulomb interactions among charge
densities of isolated monomers. The Eexch term originates from the electron exchange between
the component monomers due to the antisymmetric nature of a wave function. The Erep term
arises from other types of two-electron integral terms for molecular orbitals of the component
density and increased nuclear repulsion, even though the exchange term is attractive the net
exchange-repulsion interaction is always repulsive. The Epol term is defined as the orbital
relaxation energy on going from the monomer Hartree-Fock spin orbitals to the
supermolecule Hartree-Fock spin orbitals, which reflects the effect of relaxation of the
monomeric wavefunctions. The Edisp term is derived from the correlation energy difference
between the supermolecule and the component monomers. The EDA calculations were carried
GAMESS program.57 To understand the specific interaction types in the complexes, the
non-covalent interaction (NCI58, 59) analysis and quantum theory of atoms in molecules
(QTAIM60, 61) were employed. QTAIM can be used to analyze the bond critical points (BCPs)
forming in the intermolecular interactions like hydrogen bond, van der Waals, and π-π
interactions. The topology characteristics of the BCPs in the complexes were estimated using
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M06-2X/aug-cc-pVDZ level of theory have been analyzed using the Multiwfn software.63
The FT-IR spectra were recorded on a FT-IR spectrophotometer (Nicolet Nexus 670, USA) by
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using liquid film method. The liquid films were prepared by dipping one drop of C6F5Br,
C5H5N, the mixed C6F5Br and C5H5N system (i.e., with volume ratios of 3:1, 1:1 and 1:3)
onto a blank KBr pellet. The compounds C6F5Br and C5H5N were purchased from
The Raman spectra measurements were carried out at room temperature on Lab RAMHR800
with a Raman confocal microscopy system (Reni Shaw Microscope, laser excitation at 532
nm).
To understand how the intermolecular interaction occurs between C6F5Br and C5H5N, MSEP
analysis was employed to reveal their electronic properties. Then the possible interaction
modes were constructed and optimized to obtain the dimers, the vibrational frequencies and
interaction energies of the dimers were illustrated and discussed. EDA analysis was used to
unveil the driving forces for the formation of these dimers. NCI, QTAIM and NBO analyses
were used to characterize the dimers which provided detailed information about their nature.
Meantime, FT-IR, Raman and fluorescent spectra were measured to affirm the intermolecular
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As shown in Fig. 1, the MSEP contour surfaces for C6F5Br suggest that two positive
MSEP regions appear, one is on the outermost portion along the C−Br bond axis (i.e., σ-hole
consistent with the previous work.20, 37 For C5H5N, both the N atom and its aromatic π ring
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exhibit negative MSEP distributions. Their electronic features indicate that the σ-hole on Br
or π-hole on the π ring of C6F5Br with a positive MSEP region can interact with N atom or the
π ring of C5H5N with a negative MSEP region, so it can be expected that their interaction
modes via dimerization would possess many cases. Based on the MSEP analysis, we took all
possible interaction modes into account and constructed their structures for the geometry
optimization. Finally, our calculations suggest that the interactions between C6F5Br and
C5H5N can form five dimers, and their optimized geometries obtained at the
halogen-bonded complex via the Br···N interaction, dimers II and III are T-shaped or
edge-to-face structures but different from each other that there are "two legs" (i.e., one C–Br
bond and one C–F bond) standing above the C5H5N ring in dimer II while there is only "one
leg" (i.e., C–Br bond) of C6F5Br interacting with the C5H5N ring in dimer III. Note that the
C–Br bonds in dimers II and III pointing toward the N and C atoms of C5H5N, respectively.
The dimers IV and V are parallel-displaced or offset face-to-face π-π interactions but different
from each other that the C–Br bond of C6F5Br and the N atom of C5H5N in dimer IV (or V)
interaction energies for the five dimers obtained without and with the CP method. It can be
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seen that the geometrical parameters, stretching vibrational frequencies and interaction
energies are affected by the CP optimization. Compared to the optimized structures of dimers
in the geometrical parameters and stretching vibrational frequencies of their C–Br bonds. But
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the distances of Br···N and Br···C interactions in dimers (I-III) are significantly influenced
by the CP method, which are longer than those obtained without the CP method. From Table 1,
it can be seen that the halogen-bonded dimer I via the Br···N interaction is stronger than the
T-shaped dimers II and III. The dimers IV and V are even stronger than dimers (I-III).
Evidently, the big π-hole on the π ring of C6F5Br with a positive MSEP region enables it to be
a better electron acceptor which interacts with N atom and the π ring of C5H5N with a
negative MSEP region by forming stronger π-π interactions in dimers IV and V. Thereby, the
interactions between C6F5Br and C5H5N would form more competitive π-hole intermolecular
wB97-XD/aug-cc-pVDZ levels, those obtained without the BSSE corrections for dimers (I-V)
are closer to those obtained at the wB97-XD/aug-cc-pVDZ level, those obtained with CP
method have larger deviations from those obtained at the wB97-XD/aug-cc-pVDZ level but
seem to be closer to those obtained at the M06-2X/TZVP level. Both the interaction energies
obtained without and with the BSSE corrections deviate from those obtained at the
obtained without and with BSSE corrections, the energy decomposition analyses (EDA) based
on the geometries obtained at the M06-2X/aug-cc-pVDZ level without and with CP methods
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were also performed at the same level, and the total interaction energy (∆Eint, EDA) and five
terms (Eelst, Eexch, Erep, Epol and Edisp) were summarized in Table 2. It is clear that the ∆Eint, EDA
the interaction energies obtained without BSSE corrections. Therefore, the optimized
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geometries obtained without the CP method will be used for the following analyses.
From Table 2, EDA analysis can tell us the driving forces of the formation of dimers
(I-V). The terms of Eelst, Eexch, Epol and Edisp having negative values indicate that they are
attractive interactions which contribute to the stability of dimers (I-V). For dimer I, the
electrostatic (Eelst) interaction contributes significantly to its stability, which takes up about
32% of the total attractive component. The exchange (Eexch) and dispersion (Edisp) interactions
also make significant contributions (i.e., 27% and 26%, respectively), while the polarization
interaction has a contribution of 15%. Differently, with regard to dimers (II-V), the most
significant contribution is the dispersion (Edisp) interaction which accounts for 50-60%,
followed by Eexch, Eelst and Edisp. The four attractive interactions for dimers (I-V) countervail
QTAIM analyses were employed. The reduced density gradient64 (s= 1/(2(3π2)1/3)|∇ρ|/ρ4/3) and
the electron density (ρ) multiplied by the sign of the second Hessian eigenvalue (λ2) of the
Laplacian ∇2ρ (i.e., sign(λ2)ρ) in NCI were used for the analyses. Generally, very small value
close to zero for the reduced density gradient is observed for the regions of noncovalent
interactions, low-gradient regions with smaller or larger densities are related to weak or
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utilized to distinguish the types of noncovalent interactions (i.e., bonded interaction (λ2< 0),
nonbonded interaction (λ2 > 0)). The quantity of sign(λ2)ρ with a small and negative value or
with a value near zero indicates very weak, van der Waals interactions.59 The plots of s versus
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sign(λ2)ρ and the gradient isosurfaces for dimers (I-V) are depicted in Fig. 3. It can be seen
that the low-density and low-gradient spikes for dimer I are located at negative or positive
sign(λ2)ρ values in the vicinity of –0.015 or 0.020 a.u., which are indicative of strongly
attractive (i.e., Br···N halogen bond) or nonbonded (i.e., between central areas of C6F5Br and
C5H5N) interaction. The gradient isosurfaces for dimer I lies between the C–Br bond of
dimers II and III, the low-density and low-gradient spikes locating at negative sign(λ2)ρ
values in the vicinity of –0.007 a.u. are indicative of strongly attractive interaction (i.e.,
Br···N halogen bond for dimer II and Br···C halogen bond for dimer III), while the
low-density and low-gradient spikes locating at positive sign(λ2)ρ values in the range of
0.020-0.025 a.u. are indicative of nonbonded interactions between central areas of C5H5N and
C6F5Br. In addition, the low-density and low-gradient spikes for dimers II and III locating at
positive sign(λ2)ρ values in the vicinity of 0.005 a.u. are indicative of weak and dispersive
attractions like van der Waals interactions. It is clear that the gradient isosurfaces which are
characteristic of C–Br···N (or C–Br···C) halogen-bonded interaction between the C–Br bond
of C6F5Br and N (or C) atom of C5H5N in dimer II (or III). The low-density and low-gradient
spikes for dimers IV and V locating at negative or positive sign(λ2)ρ values in the vicinity of
–0.005 or 0.005 a.u. are indicative of attractive π···π attractions, while the spikes locating at
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positive sign(λ2)ρ in the range of 0.020-0.025 a.u. suggest nonbonded interactions in the
central areas of C6F5Br and C5H5N. The green clouds of gradient isosurfaces between the π
Moreover, the nature of intermolecular interactions in dimers (I-V) was explored based
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on the QTAIM analysis. The intermolecular BCPs are shown in Fig. 4, and their topological
parameters are listed in Table 3. It can be seen that dimer I possessing one intermolecular
Br···N BCP is C–Br···N halogen-bonded interaction. Dimer II possesses one Br···N and one
van der Waals interaction, respectively. Dimer III is a C–Br···C halogen-bonded interaction.
Both dimers IV and V have four intermolecular BCPs, in which dimer IV has two BCPs
corresponding to π···π interactions, one BCP corresponding to F···C van der Waals
interaction and one BCP corresponding to C···N van der Waals interaction while dimer V has
BCPs corresponding to two π···π interactions, one BCP corresponding to C···N van der
Waals interaction and another BCP corresponding to Br···C van der Waals interaction.
Additionally, the sign of electronic energy density (H) was used to distinguish noncovalent
interactions, the positive (or negative) value is indicative of electrostatic (or covalent)
dominant interaction.66 All H values for dimers (I-V) are positive, suggesting the interactions
The above results suggest that dimers I and II are C–Br···N halogen-bonded interactions
while dimer III is C–Br···C halogen-bonded interaction, and dimers IV and V are π···π
interactions. To further uncover their interaction nature, natural bond orbital (NBO)67, 68
analysis was carried out to explore the intermolecular donor-acceptor orbital interaction in
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dimers (I-V). The orbital interaction between an electron donor orbital (i.e., "filled"
Lewis-type or bonding NBO) of one subsystem and an electron acceptor orbital (i.e., "empty"
their nature. For dimer I, the orbital interaction for C–Br···N halogen bond is σ-hole···n bond
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which occurs between lone pair orbital of N atom (i.e., LP(1)N) and σ antibonding orbital of
C–Br bond (i.e., BD*(1)C–Br) with a stabilization energy of 4.32 kcal/mol (Fig. 5a).
Although dimer II has a C–Br···N halogen bond, the orbital interactions suggest that a
stronger stabilization energy of 0.51 kcal/mol is observed for the electron delocalization from
the πC=N bonding orbital (i.e., BD(2)C–N) of C5H5N to the σC–Br antibonding orbital (i.e.,
BD*(1)C–Br) of C6F5Br (Fig. 5b), while the LP(1)N→BD*(1)C–Br orbital interaction has a
smaller stabilization energy of 0.06 kcal/mol (Fig. 5c), meaning that dimer II is actually
bond, as can be seen from the orbital interactions between the two πC=C bonding orbitals of
C5H5N and the σC–Br antibonding orbital of C6F5Br (Fig. 5d and e). With respect to dimers IV
and V, they are π-hole···π bonds because the electron delocalizations occur between the πC=C
or πC=N bonding and antibonding orbitals of C6F5Br and C5H5N (Fig. 5f-k).
each molecule. Thereby, FT-IR and Raman spectra measurements for C6F5Br, C5H5N,
the mixed C6F5Br and C5H5N with volume ratios of 3:1, 1:1 and 1:3 were carried out.
as shown in Fig. 6. The three characteristic peaks at 1093, 1008, 983 cm-1 of FT-IR
spectrum for C6F5Br are in agreement with the previous report.69, 70 Compared to the
FT-IR spectra of C6F5Br and C5H5N, the peak changes for the mixed C6F5Br and
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C5H5N system appear in the range of 900-1100 cm-1, so such range of IR spectra are
shown here. We noted that the characteristic peaks of the mixed C6F5Br and C5H5N
affected the peak shift. As one example, there is a peak at 1093 cm-1 (or 983 cm-1) of
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FT-IR spectrum for C6F5Br, but the peak has shifted to 1098 cm-1 (or 986 cm-1) of
FT-IR spectrum for the mixed C6F5Br and C5H5N system with volume ratio of 1:1.
Similar to the results from the FT-IR spectra, slight changes in Raman-shift of
experimental Raman spectra for the mixed C6F5Br and C5H5N systems were observed
in the range of 300-1300 cm-1 (Fig. 7). For instance, the peaks at 359 cm-1 for C6F5Br
and at 1030 cm-1 for C5H5N change to be 360 cm-1 and 1028 cm-1 for the mixed C6F5Br
and C5H5N system with volume ratio of 1:1. The previous reports suggest that the
in this work, the peak changes observed in FT-IR and Raman spectra for the mixed
C6F5Br and C5H5N systems indicate that these phenomena are closely associated with
4. Conclusions
In summary, the intermolecular interactions between C6F5Br and C5H5N have been
explored based on the calculations at the M06-2X/aug-cc-pVDZ level of theory. The Br atom
and π ring of C6F5Br exhibit the intriguing σ- and π-holes’ characters, making them interact
with N or C atom or π ring of C5H5N by forming five different dimers. The dimers I and II
formed via σ-hole···n bonds are stronger than the one formed via σ-hole···π bond (dimer III),
while the dimers (IV and V) formed via π-hole···π bonds between the π-hole of C6F5Br and π
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ring of C5H5N are much stronger. The existences of these intermolecular interactions and their
nature have been confirmed and elaborated by NCI, QTAIM and NBO analyses. These dimers
Raman spectra show that the slight peak changes are observed for the mixed C6F5Br and
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C5H5N systems which provide support to the formation of molecular complexes between
C6F5Br and C5H5N. We expect the results presented in this work are beneficial for the
Conflicts of interest
Acknowledgments
The work was financially supported by the National Natural Science Foundation of China
(Grant No. 21403097) and the Fundamental Research Funds for the Central Universities
(lzujbky-2014-182).
References
1. T. Clark, M. Hennemann, J. S. Murray and P. Politzer, J. Mol. Model., 2007, 13, 291-296.
2. P. Politzer, P. Lane, M. C. Concha, Y. Ma and J. S. Murray, J. Mol. Model., 2007, 13,
305-311.
3. N. Cheng, F. Bi, Y. Liu, C. Zhang and C. Liu, New J. Chem., 2014, 38, 1256-1263.
4. Q. Li, R. Li, Z. Zhou, W. Li and J. Cheng, J. Chem. Phys., 2012, 136, 014302.
5. Q. Li, Q. Lin, W. Li, J. Cheng, B. Gong and J. Sun, ChemPhysChem,2008, 9, 2265-2269.
6. S. A. C. McDowell, J. Chem. Phys., 2010, 132, 044312.
7. S. A. C. McDowell and D. S. Hamilton, Mol. Phys., 2015, 113, 1991-1997.
8. M. Solimannejad, M. Malekani and I. Alkorta, J. Phys. Chem. A 2010, 114, 12106-12111.
9. P. P. Zhou, W. Y. Qiu, S. Liu and N. Z. Jin, Phys. Chem. Chem. Phys., 2011, 13,
7408-7418.
10. G. Cavallo, P. Metrangolo, R. Milani, T. Pilati, A. Priimägi, G. Resnati and G. Terraneo,
Chem. Rev., 2016, 116, 2478-2601.
11. M. Fourmigue, Curr. Opin. Solid State Mater. Sci., 2009, 13, 36-45.
14
Page 15 of 27 Physical Chemistry Chemical Physics
View Article Online
DOI: 10.1039/C8CP00420J
12. P. Metrangolo, F. Meyer, T. Pilati, G. Resnati and G. Terraneo, Angew. Chem. Int. Ed.,
2008, 47, 6114-6127.
13. P. Metrangolo, H. Neukirch, T. Pilati and G. Resnati, Acc. Chem. Res., 2005, 38, 386-395.
106285-106296.
17. X. Yang, F. Yang, R.-Z. Wu, C.-X. Yan, D.-G. Zhou, P.-P. Zhou and X. Yao, J. Mol.
Graph. Model., 2017, 76, 419-428.
18. X. Yang, P.-P. Zhou, F. Yang, D.-G. Zhou, C.-X. Yan, P.-J. Zheng and Y. Dai,
ChemistrySelect, 2016, 1, 1741-1750.
19. X. Yang, P.-P. Zhou, D.-G. Zhou, P.-J. Zheng, Y. Dai, C.-X. Yan and Z. Yang, Comput.
Theor. Chem., 2016, 1076, 32-41.
20. P.-P. Zhou, X. Yang, W. Ye, L.-W. Zhang, F. Yang, D.-G. Zhou and S. Liu, New J. Chem.,
2016, 40, 9139-9147.
21. T. Clark, Faraday Discuss., 2017, 203, 9-27
22. S. J. Grabowski, Phys. Chem. Chem. Phys., 2017, 19, 29742-29759.
23. L. Li, H. Wang, W. Wang and W. J. Jin, CrystEngComm, 2017, 19, 5058-5067.
24. S. A. C. McDowell, Chem. Phys., 2014, 598, 1-4.
25. J. S. Murray, P. Lane, T. Clark and P. Politzer, J. Mol. Model., 2007, 13, 1033-1038.
26. J. S. Murray, P. Lane, T. Clark, K. E. Riley and P. Politzer, J. Mol. Model., 2012, 18,
541-548.
27. V. d. P. N. Nziko and S. Scheiner, Phys. Chem. Chem. Phys., 2016, 18, 3581-3590.
28. P. Politzer, J. S. Murray and T. Clark, Phys. Chem. Chem. Phys., 2013, 15, 11178-11189.
29. P. Politzer, J. S. Murray and T. Clark, Top. Current Chem., 2015, 358, 19-42.
30. P. Politzer, J. S. Murray, T. Clark and G. Resnati, Phys. Chem. Chem. Phys., 2017, 19,
32166-32178.
31. P. Politzer, J. S. Murray and M. C. Concha, J. Mol. Model., 2007, 13, 643-650.
32. P. Politzer, J. S. Murray and M. C. Concha, J. Mol. Model., 2008, 14, 659-665.
33. H. Wang, W. Wang and W. J. Jin, Chem. Rev., 2016, 116, 5072-5104.
34. V. Angarov and S. Kozuch, New J. Chem., 2018, 42, 1413-1422.
35. A. Bauzá and A. Frontera, Phys. Chem. Chem. Phys., 2016, 18, 32155-32159.
36. L. Li, W. X. Wu, Z. F. Liu and W. J. Jin, New J. Chem., 2018, DOI:
10.1039/C1037NJ04536K.
37. X. Pang, H. Wang, W. Wang and W. J. Jin, Cryst. Growth Des., 2015, 15, 4938-4945.
38. X. Pang, H. Wang, X. R. Zhao and W. J. Jin, CrystEngComm, 2013, 15, 2722-2730.
39. X. Q. Yan, X. R. Zhao, H. Wang and W. J. Jin, J. Phys. Chem. B, 2014, 118, 1080-1087.
40. X. P. Zhang, X. C. Zhang, H. F. Dong, Z. J. Zhao, S. J. Zhang and Y. Huang, Energy
Environ. Sci., 2012, 5, 6668-6681.
41. V. V. Sivchik, A. I. Solomatina, Y.-T. Chen, A. J. Karttunen, S. P. Tunik, P.-T. Chou and I.
O. Koshevoy, Angew. Chem. Int. Ed., 2015, 54, 14057-14060.
42. S. Tsuzuki, A. Wakisaka, T. Ono and T. Sonoda, Chem. Eur. J., 2012, 18, 951-960.
15
Physical Chemistry Chemical Physics Page 16 of 27
View Article Online
DOI: 10.1039/C8CP00420J
43. Y. Zhao and D. G. Truhlar, Acc. Chem. Res., 2008, 41, 157-167.
44. Y. Zhao and D. G. Truhlar, Theor. Chem. Acc., 2008, 120, 215-241.
45. T. H. Dunning Jr., J. Chem. Phys., 1989, 90, 1007-1023.
16
Page 17 of 27 Physical Chemistry Chemical Physics
View Article Online
DOI: 10.1039/C8CP00420J
68. A. E. Reed, R. B. Weinstock and F. Weinhold, J. Chem. Phys., 1985, 83, 735-746.
69. S. G. Frankiss and D. J. Harrison, Spectrochimi. Acta, 1975, 81, 1839-1864.
70. D. A. Long and D. Steele, Spectrochimi. Acta, 1963, 19, 1955-1961.
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Table 1 The geometrical parameters (R, d, in Å), stretching vibrational frequencies (v, in cm–1) and
interaction energies (∆Eint, in kcal mol–1) obtained without (non-CP) and with the CP methods for
C6F5Br and the dimers (I-V) at the M06-2X/aug-cc-pVDZ level of theory, and interaction energies
III M06-2X/aug-cc-pVDZ non-CP 1.8723 249.3 3.4072 –3.37 –2.28 –2.89 -4.87
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Table 2 EDA analysis of the physical components of total interaction energy (∆Eint,EDA, in
kcal mol-1) at the M06-2X/aug-cc-pVDZ//M06-2X/aug-cc-pVDZ(non-CP) and
M06-2X/aug-cc-pVDZ//M06-2X/aug-cc-pVDZ(CP) levels of theory for dimers I-V and the
CP -2.40 (17) -2.70 (19) 10.29 -1.36 (10) -7.46 (54) -3.62
III non-CP -2.29 (16) -2.96 (21) 10.79 -1.39 (10) -7.45 (53) -3.30
CP -2.06 (16) -2.54 (20) 9.66 -1.30 (10) -7.04 (54) -3.29
IV non-CP -5.35 (17) -6.30 (20) 23.83 -2.59 (8) -17.27 (55) -7.68
CP -4.68 (17) -5.14 (18) 20.52 -2.36 (8) -15.99 (57) -7.64
V non-CP -5.72 (18) -6.65 (21) 23.96 -2.92 (9) -16.80 (52) -8.13
CP -5.71 (18) -6.62 (21) 23.90 -2.92 (9) -16.78 (52) -8.13
a
The total attractive component is the sum of Eelst, Eexch, Epol and Edisp, while the magnitude in
parenthesis is the percentage of each component contributing to the total attractive
component.
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Table 3 The electron density (ρ) and Laplacian (∇2ρ), the Electronic Potential Energy Density (V),
the electronic kinetic energy density (G) and the electronic energy density (H) at the intermolecular
bond critical point (BCP) for dimers (I-V).a Units are in a.u..
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Fig. 1 The MSEP maps for C6F5Br and C5H5N mapped on the surface of molecular electron
density (isovalue=0.0004 a.u.) with MSEP values ranging from –0.025 to 0.025 a.u.
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Fig. 2 The optimized geometries for the dimers (a) I; (b) II; (c) III; (d) IV; (e) V at the
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Fig. 3 Plots of the reduced density gradient (s) versus the electron density multiplied by the sign of
the second Hessian eigenvalue (sign(λ2)ρ) and the corresponding gradient isosurfaces (s=0.50 a.u.)
for dimers (I-V). The surfaces are colored on a blue-green-red scale in terms of the sign(λ2)ρ
values. The blue, green and red surfaces are indicative of strong attraction, weak and
nonbonded interactions, respectively.
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Fig. 5 The electron donor-acceptor orbital interactions for (a) dimer I; (b) dimer II; (c) dimer
II; (d) dimer III; (e) dimer III; (f) dimer IV; (g) dimer IV; (h) dimer V; (i) dimer V; (j) dimer
V; (k) dimer V.
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Fig. 6 FT-IR spectra for C6F5Br, C5H5N, the mixed C6F5Br and C5H5N with different
volume ratios.
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Fig. 7 Raman spectra for C6F5Br, C5H5N, the mixed C6F5Br and C5H5N with different
volume ratios.
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